Trimin1|160591|e_gw1.14.11.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|160591
Unique NameTrimin1|160591|e_gw1.14.11.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length313
Homology
BLAST of jgi.p|Trimin1|160591 vs. uniprot
Match: A0A836CLG8_9STRA (Radical SAM core domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLG8_9STRA)

HSP 1 Score: 612 bits (1579), Expect = 2.500e-221
Identity = 312/312 (100.00%), Postives = 312/312 (100.00%), Query Frame = 0
Query:    1 APAQDGTIKLVCKASHGTALGGAVETVVIPMLQGPQQKKRYTVCVSSQVGCAMNCQFCHTGRMGLLANLQAAQIVEQVVIAKRHLNEIGDTTPITGVVFMGMGEPFDNYENVSKAVQVMTEKSGTGLRLSAGRVTVSTVGIVPRIRQFCEDPNMRANLAVSLHATEDTTRDWLVPVNQRHDLETLMQPPPGTPANGQRRLLVIQYTLLRGVNNSLEDGVRLGALARRLHCVVNLITFNDHPGTPFRRAEEHTAAAFSAAVSASGTLCTLRESKGDDGASACGQLGNMAIVAVAGRKPVPVGKAARAATASVS 312
            APAQDGTIKLVCKASHGTALGGAVETVVIPMLQGPQQKKRYTVCVSSQVGCAMNCQFCHTGRMGLLANLQAAQIVEQVVIAKRHLNEIGDTTPITGVVFMGMGEPFDNYENVSKAVQVMTEKSGTGLRLSAGRVTVSTVGIVPRIRQFCEDPNMRANLAVSLHATEDTTRDWLVPVNQRHDLETLMQPPPGTPANGQRRLLVIQYTLLRGVNNSLEDGVRLGALARRLHCVVNLITFNDHPGTPFRRAEEHTAAAFSAAVSASGTLCTLRESKGDDGASACGQLGNMAIVAVAGRKPVPVGKAARAATASVS
Sbjct:    1 APAQDGTIKLVCKASHGTALGGAVETVVIPMLQGPQQKKRYTVCVSSQVGCAMNCQFCHTGRMGLLANLQAAQIVEQVVIAKRHLNEIGDTTPITGVVFMGMGEPFDNYENVSKAVQVMTEKSGTGLRLSAGRVTVSTVGIVPRIRQFCEDPNMRANLAVSLHATEDTTRDWLVPVNQRHDLETLMQPPPGTPANGQRRLLVIQYTLLRGVNNSLEDGVRLGALARRLHCVVNLITFNDHPGTPFRRAEEHTAAAFSAAVSASGTLCTLRESKGDDGASACGQLGNMAIVAVAGRKPVPVGKAARAATASVS 312          
BLAST of jgi.p|Trimin1|160591 vs. uniprot
Match: D8LLN5_ECTSI (Radical SAM core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLN5_ECTSI)

HSP 1 Score: 301 bits (770), Expect = 1.300e-94
Identity = 178/395 (45.06%), Postives = 222/395 (56.20%), Query Frame = 0
Query:    3 AQDGTIKLVCKASHGTALGGAVETVVIPMLQGPQQKKRYTVCVSSQVGCAMNCQFCHTGRMGLLANLQAAQIVEQVVIAKRHLNEIGDTTPITGVVFMGMGEPFDNYENVSKAVQVMTEKSGTGLRLSAGRVTVSTVGIVPRIRQFCEDPNMRANLAVSLHATEDTTRDWLVPVNQRHDLETLMQP----------------------------------------------------------------------PPGTPANGQRR-------------------------LLVIQYTLLRGVNNSLEDGVRLGALARRLHCVVNLITFNDHPGTPFRRAEEHTAAAFSAAVSASGTLCTLRESKGDDGASACGQLG--NMAIVAVAGRKPVPV 300
            A DGT KLV   + G   G  VETV+IPML+GPQ++ RYTVCVSSQVGCAMNCQFC TGR+GL+ANLQAAQIVEQV++AKR+L  +GD +P+TGVVFMGMGEPFDNY+ V +AV+++T+    G+RL A  VTVSTVG+VP+I +FC+DP   A+LA+SLH+  D  RD L+PVN+R+ LE L +                                                                       PP  P   Q+R                         +L ++YTLL GVN+SL D  RL      + CVVNLITFN H GTPF  +    A AF  A++A G LCT R+S+GDDG +ACGQLG  +MA      RKPVPV
Sbjct:  194 AADGTRKLVSVLTSGEGAGKKVETVIIPMLRGPQREPRYTVCVSSQVGCAMNCQFCFTGRLGLMANLQAAQIVEQVLVAKRYLETVGDPSPVTGVVFMGMGEPFDNYDRVMRAVKILTDPRA-GVRLKASSVTVSTVGLVPQIERFCKDPANGASLAISLHSVVDEVRDKLIPVNRRYPLEQLSETLRTHFPRSSKPAADEPTGVALDHASSAAAPALGPKDVATGSAERKSMAGPGRKLEQETNLLARRDGAERRPPSIPTEPQQRPRSLADGGGSKREGPQRKGRRRRPRILAVEYTLLGGVNDSLGDAGRLAEWLEGVACVVNLITFNAHAGTPFSPSSPEAAEAFRRALAARGQLCTFRDSRGDDGMAACGQLGGESMAGGGDRARKPVPV 587          
BLAST of jgi.p|Trimin1|160591 vs. uniprot
Match: A0A250XDL1_9CHLO (Radical SAM core domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XDL1_9CHLO)

HSP 1 Score: 280 bits (715), Expect = 1.140e-88
Identity = 150/301 (49.83%), Postives = 207/301 (68.77%), Query Frame = 0
Query:    3 AQDGTIKLVCKASHGTALGGAVETVVIPMLQGPQQKKRYTVCVSSQVGCAMNCQFCHTGRMGLLANLQAAQIVEQVVIAKRHLNEIGDTTPITGVVFMGMGEPFDNYENVSKAVQVMTEKSGTGLRLSAGRVTVSTVGIVPRIRQFCEDPNMRANLAVSLHATEDTTRDWLVPVNQRHDLETLMQPPPGT-PANGQ--RRLLVIQYTLLRGVNNSLEDGVRLGALARRLHCVVNLITFNDHPGTPFRRAEEHTAAAFSAAVSASGTLCTLRESKGDDGASACGQLGNMAIVAVAGRKPVPV 300
            A+DGT K+  K + G A GG +ETV+IP+++   Q+ R T+C+S+QVGCAMNCQFC+TGRMGLL NL  AQ+VEQ+V AKR+L E GD TP+T VVFMGMGEP  N E V  A+++M  K   GL +S G++TVSTVG+VP IR+F    + +  LAVSLHAT D  RDW+VPVN+RH+LE+L+       P +G+   R+++I+Y +LRGVN++ ED  RL  L  ++   +NLI FN H GT F  +E    + F + +   G +CT+R+S+GDD  +ACGQLG++ +      KP P+
Sbjct:  101 AKDGTRKMAFKLTEGPAKGGVIETVLIPVVREAGQRCRITICLSTQVGCAMNCQFCYTGRMGLLGNLSTAQVVEQIVHAKRYLAEQGDRTPLTNVVFMGMGEPLHNMEVVLNAIEIM--KCPLGLHMSPGKLTVSTVGLVPEIREFVSRSS-KVQLAVSLHATTDEVRDWIVPVNRRHNLESLVSCLGELFPIDGEDRSRIVLIEYIMLRGVNDTEEDAHRLLNLLSKVRAKINLILFNPHAGTKFLPSETEVVSRFRSILIQGGRVCTVRDSRGDDEMAACGQLGDIGLAF----KPAPM 394          
BLAST of jgi.p|Trimin1|160591 vs. uniprot
Match: D8UF95_VOLCA (Radical SAM core domain-containing protein (Fragment) n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UF95_VOLCA)

HSP 1 Score: 275 bits (702), Expect = 4.690e-88
Identity = 147/289 (50.87%), Postives = 196/289 (67.82%), Query Frame = 0
Query:    1 APAQDGTIKLVCKASHGTALGGAVETVVIPMLQGPQQKKRYTVCVSSQVGCAMNCQFCHTGRMGLLANLQAAQIVEQVVIAKRHLNEIGDTTPITGVVFMGMGEPFDNYENVSKAVQVMTEKSGTGLRLSAGRVTVSTVGIVPRIRQFCEDPNMRANLAVSLHATEDTTRDWLVPVNQRHDLETLMQPPPGTPANGQRRLLVIQYTLLRGVNNSLEDGVRLGALARRLHCVVNLITFNDHPGTPFRRAEEHTAAAFSAAVSASGTLCTLRESKGDDGASACGQLGNMAI 289
            A A DGT KLV   + G A GG+VETV+IP+++    + R T+CVSSQVGCAMNCQFC+TGRMGLL NL  AQIVEQVV A+R L + G+ T +T +VFMGMGEP  N E V  A  +++     GL +S  +VT+STVG+VP +R        R  +A+SLHAT D  RDW+VPVN+R+DL TL         N   R L+I+YT+L G+N++L+D  RL A+  R++C VNLI FN H GT F+ + E    AF +A+  +G +CT+R+S+GDD  +ACGQLGN+ +
Sbjct:    9 ARAADGTRKLVFTLTEGEAAGGSVETVLIPIVRQQGLRDRLTICVSSQVGCAMNCQFCYTGRMGLLGNLTTAQIVEQVVEARRFLAQEGERTQLTNLVFMGMGEPLHNTEAVLAAADIVSHY--LGLHISHNKVTISTVGLVPEMRSVVA--RSRVQMALSLHATTDEVRDWIVPVNRRYDLATLTAALEEL-GNSSSRSLLIEYTMLHGINDTLQDAHRLVAMLARVNCKVNLIMFNPHAGTRFQPSTEEAVTAFRSALVQAGMVCTIRDSRGDDEMAACGQLGNVGL 292          
BLAST of jgi.p|Trimin1|160591 vs. uniprot
Match: A0A8J4CAH3_9CHLO (Radical SAM core domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4CAH3_9CHLO)

HSP 1 Score: 269 bits (688), Expect = 2.900e-83
Identity = 155/308 (50.32%), Postives = 199/308 (64.61%), Query Frame = 0
Query:    3 AQDGTIKLV---CKASHGTALGGA---VETVVIPMLQGPQQKKRYTVCVSSQVGCAMNCQFCHTGRMGLLANLQAAQIVEQVVIAKRHLNEIGDTTPITGVVFMGMGEPFDNYENVSKAVQVMTEKSGTGLRLSAGRVTVSTVGIVPRIRQFCEDPNMRANLAVSLHATEDTTRDWLVPVNQRHDLETLM----QPPPGTPANGQRRLLVIQYTLLRGVNNSLEDGVRLGALARRLHCVVNLITFNDHPGTPFRRAEEHTAAAFSAAVSASGTLCTLRESKGDDGASACGQLGNMAIVAVAGRKPVPV 300
            A+DGT KLV    +  HG+  GG    VETV+IPM     Q  RYT C+S+QVGCAMNCQFC+TGRMGLLANL  AQIVEQVV A+R+L E      I  +VFMGMGEP  NY+ V  A++++     TGL LS  ++ VSTVG+VP +R+F       A LAVSLHAT D  RDW+VP N+R+ L+ L+    +  P     G    +VI+Y LL GVN++LED  RL A+   ++C+VNLI FN H GTPFRR+ E +  AF     A+G  CT+R SKGDD  +ACGQLG++ + A    +P P+
Sbjct:  185 ARDGTRKLVFALLEGEHGSPAGGTHGTVETVLIPMTNRSGQNLRYTACLSTQVGCAMNCQFCYTGRMGLLANLATAQIVEQVVEARRYLAEQSVPIRIANIVFMGMGEPLHNYDAVMAAIEILA----TGLELSRNKIIVSTVGLVPEMRKFIAAGT--AKLAVSLHATTDEVRDWIVPTNRRYPLDQLLGALREAFPYDKRKGDN-FVVIEYVLLAGVNDTLEDAQRLLAITTDIYCLVNLIVFNPHEGTPFRRSTEESVRAFRGVFLAAGRPCTVRTSKGDDEMAACGQLGDVNLSA----RPAPM 481          
BLAST of jgi.p|Trimin1|160591 vs. uniprot
Match: A0A061QU93_9CHLO (23S rRNA (Adenine2503-C2)-methyltransferase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QU93_9CHLO)

HSP 1 Score: 263 bits (671), Expect = 5.640e-81
Identity = 141/289 (48.79%), Postives = 189/289 (65.40%), Query Frame = 0
Query:    3 AQDGTIKLVCKASHGTALGGAVETVVIPMLQGPQQKKRYTVCVSSQVGCAMNCQFCHTGRMGLLANLQAAQIVEQVVIAKRHLNEIGDTTPITGVVFMGMGEPFDNYENVSKAVQVMTEKSGTGLRLSAGRVTVSTVGIVPRIRQFCEDPNMRANLAVSLHATEDTTRDWLVPVNQRHDLETLMQP-----PPGTPANGQRRLLVIQYTLLRGVNNSLEDGVRLGALARRLHCVVNLITFNDHPGTPFRRAEEHTAAAFSAAVSASGTLCTLRESKGDDGASACGQLGN 286
            A DGT KLV + S G A GG VE V+IP+L+   +K+R T+CVSSQ+GCAMNCQFC TGRMGL  NL  AQIVEQ+V A+R+L  +GD TPIT VVFMGMGEP  N + V  A  +     G  L +S  +++VSTVG+VP + +FC + +  A LAVSLHAT D  RDW+VPVN+R+ +  LM       P    A   RR ++I+Y +LRG+N++ +D  RL  L   +   +NL+ FN H GT F  + +   A F + +   G +CT+R+S+GDD  +ACGQLG+
Sbjct:  174 ASDGTRKLVFRVSEGPAAGGKVEAVLIPILRSSGRKERITLCVSSQLGCAMNCQFCLTGRMGLGGNLLTAQIVEQLVEARRYLASVGDKTPITNVVFMGMGEPLHNLDAVLAATSIFCHPMG--LHMSHNKISVSTVGLVPEMERFCRESS--AQLAVSLHATTDEVRDWIVPVNRRYPIHELMASLRSLFPSQDGAGSTRRHVLIEYLMLRGINDTEDDARRLLELLEGIEAKINLLIFNPHVGTMFAASTDEQIARFRSILIQGGRVCTVRDSRGDDQMAACGQLGD 458          
BLAST of jgi.p|Trimin1|160591 vs. uniprot
Match: A0A2K3E2V3_CHLRE (Radical SAM core domain-containing protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3E2V3_CHLRE)

HSP 1 Score: 262 bits (670), Expect = 7.350e-81
Identity = 150/296 (50.68%), Postives = 191/296 (64.53%), Query Frame = 0
Query:    3 AQDGTIKLVC------KASHGTA--LGGAVETVVIPMLQGPQQKKRYTVCVSSQVGCAMNCQFCHTGRMGLLANLQAAQIVEQVVIAKRHLNEIGDTTPITGVVFMGMGEPFDNYENVSKAVQVMTEKSGTGLRLSAGRVTVSTVGIVPRIRQFCEDPNMRANLAVSLHATEDTTRDWLVPVNQRHDLETLMQPPPGTPANGQRR---LLVIQYTLLRGVNNSLEDGVRLGALARRLHCVVNLITFNDHPGTPFRRAEEHTAAAFSAAVSASGTLCTLRESKGDDGASACGQLGNM 287
            A+DGT KLV       +   G A    G VETV+IPM     Q  RYT C+S+QVGCAMNCQFC+TGRMGLL NL  AQIVEQVV A+R+L E     PI  +VFMGMGEP  NY+ V  A++++     TGL LS  ++ VSTVG+VP +R+F      RA LAVSLHAT D  RDW+VP N+R+ L+ L+         G+R+    +VI+Y LL GVN++L D  RL AL   ++C+VNLI FN H GT F+R+ +    AF A   A+G  CT+R SKGDD  +ACGQLG++
Sbjct:  174 ARDGTRKLVFALVGDWEGGDGPAGSARGTVETVLIPMTNRQGQNLRYTACLSTQVGCAMNCQFCYTGRMGLLGNLSTAQIVEQVVEARRYLAEQEVQIPIANIVFMGMGEPLHNYDAVMSAIEILA----TGLELSRNKIIVSTVGLVPEMRRFIASG--RAKLAVSLHATTDEVRDWIVPTNRRYPLDQLLGALREAFPYGKRKGDDFVVIEYVLLAGVNDTLADAERLLALTSDIYCLVNLIVFNPHDGTQFKRSSDDDVRAFRAVFLAAGRPCTVRASKGDDEMAACGQLGDV 463          
BLAST of jgi.p|Trimin1|160591 vs. uniprot
Match: A0A8J4FD97_9CHLO (Radical SAM core domain-containing protein n=3 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4FD97_9CHLO)

HSP 1 Score: 261 bits (667), Expect = 4.060e-80
Identity = 151/307 (49.19%), Postives = 197/307 (64.17%), Query Frame = 0
Query:    3 AQDGTIKLVCKA----SHGTALG--GAVETVVIPMLQGPQQKKRYTVCVSSQVGCAMNCQFCHTGRMGLLANLQAAQIVEQVVIAKRHLNEIGDTTPITGVVFMGMGEPFDNYENVSKAVQVMTEKSGTGLRLSAGRVTVSTVGIVPRIRQFCEDPNMRANLAVSLHATEDTTRDWLVPVNQRHDLETLMQPPPGTPANGQRR---LLVIQYTLLRGVNNSLEDGVRLGALARRLHCVVNLITFNDHPGTPFRRAEEHTAAAFSAAVSASGTLCTLRESKGDDGASACGQLGNMAIVAVAGRKPVPV 300
            A+DGT KLV         G A G  G VETV+IPM     +  RYT C+S+QVGCAMNCQFC+TGRMGLLANL  AQIVEQVV A+R+L E      I  +VFMGMGEP  NY++V   ++++     TGL LS  ++ VSTVG+VP +R+F       A LAVSLHAT D  RDW+VP N+R+ L+ L+     +    +R+    +VI+Y LL GVN++LED  RL AL   ++C+VNLI FN H GTPFRR+ + +  AF      +G  CT+R SKGDD  +ACGQLG++ + A    +P P+
Sbjct:  186 ARDGTRKLVFALLGAEQGGPARGTHGTVETVLIPMTNRSGENLRYTACLSTQVGCAMNCQFCYTGRMGLLANLTTAQIVEQVVEARRYLAEQSVPIRIANIVFMGMGEPLHNYDSVMATIEILA----TGLELSRNKIIVSTVGLVPEMRKFIAAGT--AKLAVSLHATTDEVRDWIVPTNRRYPLDQLLGALRESFPYDKRKGDDFVVIEYVLLAGVNDTLEDAQRLLALTSDIYCLVNLIVFNPHEGTPFRRSADESVRAFRGVFLTAGRPCTVRTSKGDDEMAACGQLGDVNLSA----RPAPM 482          
BLAST of jgi.p|Trimin1|160591 vs. uniprot
Match: A0A383WDR8_TETOB (Radical SAM core domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WDR8_TETOB)

HSP 1 Score: 257 bits (657), Expect = 4.820e-79
Identity = 147/293 (50.17%), Postives = 192/293 (65.53%), Query Frame = 0
Query:    1 APAQDGTIKLVCKASHGTALGGAVETVVIPMLQGPQQKKRYTVCVSSQVGCAMNCQFCHTGRMGLLANLQAAQIVEQVVIAKRHLN-EIGDTTPITGVVFMGMGEPFDNYENVSKAVQVMTEKSGTGLRLSAGRVTVSTVGIVPRIRQFCEDPNMRANLAVSLHATEDTTRDWLVPVNQRHDLETL---MQPPPGTPANGQRRLLVIQYTLLRGVNNSLEDGVRLGALARRLHCVVNLITFNDHPGTPFRRAEEHTAAAFSAAVSASGTLCTLRESKGDDGASACGQLGNMAI 289
            A A+DGT KLV K + G   GG+VE V+IPM      +K  T+CVSSQVGCAMNCQFC+TGRMGL  NL  AQI+EQ+V+A R L  +      IT VVFMGMGEP  NYE V  AV+VM +    GL +S  +VTVSTVG+V  + +F    N++  LA+SLHAT D  RDW+VPVN+RH+L  L   ++   GT  N   R ++++YT+L GVN+SL+D  RL AL   +   VNLI FN   GT F+ +      AF + +  +G +CT+R+S+GDD  +ACGQLGN A+
Sbjct:  176 AAAKDGTTKLVFKLTEGEGAGGSVEAVLIPMTHRRGSRKHITLCVSSQVGCAMNCQFCYTGRMGLSGNLTTAQIIEQMVVACRVLAADPSADASITNVVFMGMGEPLHNYEAVMAAVEVMCQP--LGLHMSHNKVTVSTVGLVDVLERFAASSNVQ--LALSLHATTDEVRDWIVPVNRRHNLAALTAVLRQHYGT-GNAAGRRVLVEYTMLAGVNDSLQDAQRLVALLEGVDAKVNLIMFNPFQGTRFKPSTIEQVLAFRSVLIQAGRICTIRDSRGDDEMAACGQLGNPAL 463          
BLAST of jgi.p|Trimin1|160591 vs. uniprot
Match: A0A250X327_9CHLO (Radical SAM core domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X327_9CHLO)

HSP 1 Score: 256 bits (654), Expect = 2.170e-78
Identity = 146/299 (48.83%), Postives = 192/299 (64.21%), Query Frame = 0
Query:    3 AQDGTIKLVCKASHGTALG-GAVETVVIPMLQGPQQKKRYTVCVSSQVGCAMNCQFCHTGRMGLLANLQAAQIVEQVVIAKRHLN-EIGDTT-----PITGVVFMGMGEPFDNYENVSKAVQVMTEKSGTGLRLSAGRVTVSTVGIVPRIRQFCEDPNMRANLAVSLHATEDTTRDWLVPVNQRHDLETLMQPPPG-------TPANGQRRLLVIQYTLLRGVNNSLEDGVRLGALARRLHCVVNLITFNDHPGTPFRRAEEHTAAAFSAAVSASGTLCTLRESKGDDGASACGQLGNM 287
            AQDGT KLV   + G     G VETV+IPM        RYT C+S+QVGCAMNCQFC+TGRMGLL NL  AQIVEQVV A+R L+ E  D+      PI  +VFMGMGEP  NY  +  A+ ++ E    GL LS  ++ VS+VG+VP IR F +    +A LAVSLHAT D  RDW+VPVN+R+ ++ L+    G         +N   + +VI+Y LLR +N++ ED VRL  L + ++C+VNLI FN H GT F+ +EE +   F + +  +G +CT+R SKGDD  SACGQLG++
Sbjct:  174 AQDGTKKLVFALNQGEGSAMGTVETVLIPMPNKNGINSRYTACLSTQVGCAMNCQFCYTGRMGLLGNLTTAQIVEQVVEARRMLSQEASDSAGASEIPIGNIVFMGMGEPLHNYNALLAAIDILAE----GLCLSRSKIIVSSVGLVPEIRSFLD--TKKAKLAVSLHATTDEVRDWIVPVNRRYPIKELISLLQGYFPMSNAKQSNTSDKFVVIEYVLLRHINDTAEDAVRLSDLLKDVYCMVNLIVFNPHEGTQFKGSEEESVKTFRSILVKAGKVCTVRVSKGDDTMSACGQLGDL 466          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|160591 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CLG8_9STRA2.500e-221100.00Radical SAM core domain-containing protein (Fragme... [more]
D8LLN5_ECTSI1.300e-9445.06Radical SAM core domain-containing protein n=2 Tax... [more]
A0A250XDL1_9CHLO1.140e-8849.83Radical SAM core domain-containing protein n=1 Tax... [more]
D8UF95_VOLCA4.690e-8850.87Radical SAM core domain-containing protein (Fragme... [more]
A0A8J4CAH3_9CHLO2.900e-8350.32Radical SAM core domain-containing protein n=1 Tax... [more]
A0A061QU93_9CHLO5.640e-8148.7923S rRNA (Adenine2503-C2)-methyltransferase n=1 Ta... [more]
A0A2K3E2V3_CHLRE7.350e-8150.68Radical SAM core domain-containing protein n=3 Tax... [more]
A0A8J4FD97_9CHLO4.060e-8049.19Radical SAM core domain-containing protein n=3 Tax... [more]
A0A383WDR8_TETOB4.820e-7950.17Radical SAM core domain-containing protein n=1 Tax... [more]
A0A250X327_9CHLO2.170e-7848.83Radical SAM core domain-containing protein n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004383Ribosomal RNA large subunit methyltransferase RlmN/CfrPIRSFPIRSF006004Cfrcoord: 1..297
e-value: 1.8E-88
score: 293.7
IPR004383Ribosomal RNA large subunit methyltransferase RlmN/CfrSFLDSFLDF00275adenosine_C2_methyltransferascoord: 3..286
e-value: 0.0
score: 302.3
IPR007197Radical SAMPFAMPF04055Radical_SAMcoord: 46..186
e-value: 1.6E-10
score: 41.6
IPR007197Radical SAMSFLDSFLDS00029Radical_SAMcoord: 3..286
e-value: 0.0
score: 302.3
IPR007197Radical SAMPROSITEPS51918RADICAL_SAMcoord: 37..276
score: 24.312153
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70Aldolase class Icoord: 1..292
e-value: 9.3E-92
score: 309.1
IPR040072Methyltransferase (Class A)PANTHERPTHR3054423S RRNA METHYLTRANSFERASEcoord: 2..287
NoneNo IPR availableCDDcd01335Radical_SAMcoord: 50..252
e-value: 5.42362E-8
score: 50.4097
NoneNo IPR availableSUPERFAMILY102114Radical SAM enzymescoord: 40..257

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_14contigContig_14:623095..627287 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|160591mRNA_3183Tribonema minus UTEX_B_3156 mRNAContig_14 623095..627287 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|160591|e_gw1.14.11.1 ID=Trimin1|160591|e_gw1.14.11.1|Name=jgi.p|Trimin1|160591|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=313bp
APAQDGTIKLVCKASHGTALGGAVETVVIPMLQGPQQKKRYTVCVSSQVG
CAMNCQFCHTGRMGLLANLQAAQIVEQVVIAKRHLNEIGDTTPITGVVFM
GMGEPFDNYENVSKAVQVMTEKSGTGLRLSAGRVTVSTVGIVPRIRQFCE
DPNMRANLAVSLHATEDTTRDWLVPVNQRHDLETLMQPPPGTPANGQRRL
LVIQYTLLRGVNNSLEDGVRLGALARRLHCVVNLITFNDHPGTPFRRAEE
HTAAAFSAAVSASGTLCTLRESKGDDGASACGQLGNMAIVAVAGRKPVPV
GKAARAATASVS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004383rRNA_lsu_MTrfase_RlmN/Cfr
IPR007197rSAM
IPR013785Aldolase_TIM
IPR040072Methyltransferase_A