Trimin1|160219|e_gw1.12.112.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|160219
Unique NameTrimin1|160219|e_gw1.12.112.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length295
Homology
[Close]
BLAST of jgi.p|Trimin1|160219 vs. uniprot
Match: A0A836CMN1_9STRA (Cysteine-rich protein with zinc finger protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMN1_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 4.370e-5
Identity = 22/22 (100.00%), Postives = 22/22 (100.00%), Query Frame = 0 
Query:    1 MPAGLCEHGRQRHMCKDCGGAD 22
            MPAGLCEHGRQRHMCKDCGGAD
Sbjct:    1 MPAGLCEHGRQRHMCKDCGGAD 22
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|160219 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CMN1_9STRA4.370e-5100.00Cysteine-rich protein with zinc finger protein n=1... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_12contigContig_12:263987..267890 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|160219mRNA_3711Tribonema minus UTEX_B_3156 mRNAContig_12 263987..267890 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|160219|e_gw1.12.112.1 ID=Trimin1|160219|e_gw1.12.112.1|Name=jgi.p|Trimin1|160219|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=295bp
MPAGLCEHGRQRHMCKDCGGADICRHGRRRSGCRDCGGGHICEHDRERRK
CTLCSGSSICAHGRRRYYCKDCGGKGICEHGHYRSGCKGRRSSAVCLHGH
WRVQCTECGGTSICAHGRRRFHCKDCGGLGICVHGRRQSYCRDCGGRGIC
DHGKRGTSCKDCKQRLLCPHNRQRYYCKPCGGKGICKHDRIRSSCKDCGG
GGLCKHSRQRHRCKDCGGRGICRHGTRHSGCRDCGGGQICEHDRERRKCT
YCGGSSICVHGRRRYYCGDCGGRGMCVHGKRRVSCKDCEQRRGT*
back to top