Trimin1|160148|e_gw1.12.87.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|160148
Unique Name	Trimin1\|160148\|e_gw1.12.87.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	289

Homology

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BLAST of jgi.p|Trimin1|160148 vs. uniprot
Match: A0A835ZDB3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDB3_9STRA)

HSP 1 Score: 159 bits (402), Expect = 1.430e-43
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0

Query:    1 MDAATCAVAARNGHLHSLQWLREQGCEWDERAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADAGLQIDSDEISAAAAERGHLEALQWLLARGCPVSWRAAVAAARGGHLQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCVLRY 161
            MDAATCAVAARNGHLHSLQWLREQGCEWDERAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADAGLQIDSDEISAAAAERGHLEALQWLLARGCPVSWRAAVAAARGGHLQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCVLRY
Sbjct:    1 MDAATCAVAARNGHLHSLQWLREQGCEWDERAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADAGLQIDSDEISAAAAERGHLEALQWLLARGCPVSWRAAVAAARGGHLQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCVLRY 161

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BLAST of jgi.p|Trimin1|160148 vs. uniprot
Match: A0A835ZLA1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLA1_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.700e-9
Identity = 31/41 (75.61%), Postives = 37/41 (90.24%), Query Frame = 0

Query:   77 DAGLQIDSDEISAAAAERGHLEALQWLLARGCPVSWRAAVA 117
            +AGLQ+DS+ +  AAAERGHLEALQWL ARGCPVSW+AA+A
Sbjct:   32 EAGLQMDSEGVGTAAAERGHLEALQWLRARGCPVSWKAALA 72

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|160148 vs. uniprot

BLAST of jgi.p|Trimin1|160148 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835ZDB3_9STRA	1.430e-43	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZLA1_9STRA	1.700e-9	75.61	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 3..288 e-value: 2.5E-20 score: 74.4
None	No IPR available	PANTHER	PTHR46586	ANKYRIN REPEAT-CONTAINING PROTEIN	coord: 1..280
None	No IPR available	PANTHER	PTHR46586:SF3	ANKYRIN REPEAT-CONTAINING PROTEIN	coord: 1..280
None	No IPR available	SUPERFAMILY	140860	Pseudo ankyrin repeat-like	coord: 149..256
None	No IPR available	SUPERFAMILY	140860	Pseudo ankyrin repeat-like	coord: 6..116

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_12	contig	Contig_12:306397..310274 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|160148	mRNA_3715	Tribonema minus UTEX_B_3156	mRNA	Contig_12 306397..310274 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|160148|e_gw1.12.87.1 ID=Trimin1|160148|e_gw1.12.87.1|Name=jgi.p|Trimin1|160148|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=289bp
MDAATCAVAARNGHLHSLQWLREQGCEWDERACSEAARRGDLAMLQWARA
HNCPWDSTTATEIARRGDLTMLEWAADAGLQIDSDEISAAAAERGHLEAL
QWLLARGCPVSWRAAVAAARGGHLQTGQLKVVKWLNSLGCAWHSEICTAA
ARGGHLCVLRYLRTNGCPSNASILSAAVCGGHIEVLEWALPNRCEWNESL
CRRAAKRWETAVVDWAAARGCTMSAATCAVAARKGPLRSLQWLRKQGCEW
DERTCSEAARRGDVAMLQWARAHNCPWDRTTATELARR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036770	Ankyrin_rpt-contain_sf