Trimin1|160126|e_gw1.12.136.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|160126
Unique NameTrimin1|160126|e_gw1.12.136.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length127
Homology
BLAST of jgi.p|Trimin1|160126 vs. uniprot
Match: A0A835ZHY3_9STRA (Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHY3_9STRA)

HSP 1 Score: 235 bits (599), Expect = 4.400e-78
Identity = 125/126 (99.21%), Postives = 125/126 (99.21%), Query Frame = 0
Query:    1 MSKPLLVLGCRVKEKVEDKVQRKEQLDKEKWWRVILHNDDIHTFDYVTLSITKVVKKLTMKIAYEITMETHKAGKATVTQAWKSQAETYCLGLQQCGLTASIAPDSKFGKGGDEGXXXXXXXGGSS 126
            MSKPLLVLGCRVKEKVEDKVQRKEQLDKEKWWRVILHNDDIHTFDYVTLSITKVVKKLTMKIAYEITMETHKAGKATVTQAWKSQAETYCLGLQQCGLTASIAPDSKFGKGGDEGXXXXXX GGSS
Sbjct:    1 MSKPLLVLGCRVKEKVEDKVQRKEQLDKEKWWRVILHNDDIHTFDYVTLSITKVVKKLTMKIAYEITMETHKAGKATVTQAWKSQAETYCLGLQQCGLTASIAPDSKFGKGGDEGXXXXXXEGGSS 126          
BLAST of jgi.p|Trimin1|160126 vs. uniprot
Match: A0A835ZBL6_9STRA (Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBL6_9STRA)

HSP 1 Score: 184 bits (468), Expect = 8.900e-58
Identity = 92/93 (98.92%), Postives = 93/93 (100.00%), Query Frame = 0
Query:   11 RVKEKVEDKVQRKEQLDKEKWWRVILHNDDIHTFDYVTLSITKVVKKLTMKIAYEITMETHKAGKATVTQAWKSQAETYCLGLQQCGLTASIA 103
            RVKEKVED+VQRKEQLDKEKWWRVILHNDDIHTFDYVTLSITKVVKKLTMKIAYEITMETHKAGKATVTQAWKSQAETYCLGLQQCGLTASIA
Sbjct:   58 RVKEKVEDQVQRKEQLDKEKWWRVILHNDDIHTFDYVTLSITKVVKKLTMKIAYEITMETHKAGKATVTQAWKSQAETYCLGLQQCGLTASIA 150          
BLAST of jgi.p|Trimin1|160126 vs. uniprot
Match: D8LIY1_ECTSI (ClpS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIY1_ECTSI)

HSP 1 Score: 167 bits (423), Expect = 6.260e-50
Identity = 85/106 (80.19%), Postives = 97/106 (91.51%), Query Frame = 0
Query:   12 VKEKVEDKVQ--RKEQLDKEKWWRVILHNDDIHTFDYVTLSITKVVKKLTMKIAYEITMETHKAGKATVTQAWKSQAETYCLGLQQCGLTASIAPDSKFGKGGDEG 115
            VKEKV++ V+   KE+LDKE+WWRVILHND+IHTFDYVT SITKVVKKLTMK AYE+TMETHK+GKATVTQAWKS++E+YCL LQQCGLTASIAPDSKF +GG EG
Sbjct:   91 VKEKVKEMVEVDNKEELDKEQWWRVILHNDEIHTFDYVTQSITKVVKKLTMKKAYEVTMETHKSGKATVTQAWKSKSESYCLQLQQCGLTASIAPDSKF-EGGGEG 195          
BLAST of jgi.p|Trimin1|160126 vs. uniprot
Match: A0A7S1RIS0_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RIS0_ALECA)

HSP 1 Score: 132 bits (333), Expect = 1.190e-36
Identity = 66/106 (62.26%), Postives = 78/106 (73.58%), Query Frame = 0
Query:    9 GCRVKEKVEDKVQRKEQLDKEKWWRVILHNDDIHTFDYVTLSITKVVKKLTMKIAYEITMETHKAGKATVTQAWKSQAETYCLGLQQCGLTASIAPDSKF--GKGG 112
            G  + EK++ K Q KEQ DKEKWWRV+LHNDDIHTF+YVT  +T++V  LT + AY IT E H +GKATV   WKS +E YC+ LQQ GLT SIAPDSKF   KGG
Sbjct:   91 GIALDEKIDRKQQMKEQFDKEKWWRVLLHNDDIHTFEYVTGCLTRIVPHLTRRKAYNITWEAHSSGKATVACVWKSLSEQYCVNLQQLGLTVSIAPDSKFEGNKGG 196          
BLAST of jgi.p|Trimin1|160126 vs. uniprot
Match: A0A812W203_9DINO (CPLS1 protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812W203_9DINO)

HSP 1 Score: 128 bits (321), Expect = 3.140e-35
Identity = 66/106 (62.26%), Postives = 78/106 (73.58%), Query Frame = 0
Query:    9 GCRVKEKVEDKVQRKEQLDKEKWWRVILHNDDIHTFDYVTLSITKVVKKLTMKIAYEITMETHKAGKATVTQAWKSQAETYCLGLQQCGLTASIAPDSKF--GKGG 112
            G  V EKV+ K Q KEQ +KEKWWRV+LHNDDIHTF+YVT  + KVV+ L+ + AY IT E H +GKATV   WK+ AE +C+ LQQ GLT SIAPDSKF   KGG
Sbjct:   60 GIAVIEKVDRKTQMKEQFEKEKWWRVLLHNDDIHTFEYVTNCLVKVVQHLSRRKAYGITWEAHSSGKATVACVWKALAEQFCVKLQQDGLTVSIAPDSKFEGNKGG 165          
BLAST of jgi.p|Trimin1|160126 vs. uniprot
Match: A0A7S3M2P1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M2P1_9STRA)

HSP 1 Score: 129 bits (325), Expect = 8.580e-35
Identity = 66/107 (61.68%), Postives = 78/107 (72.90%), Query Frame = 0
Query:    9 GCRVKEKVEDKVQRKEQLDKEKWWRVILHNDDIHTFDYVTLSITKVVKKLTMKIAYEITMETHKAGKATVTQAWKSQAETYCLGLQQCGLTASIAPDSKF-GKGGDE 114
            G  + EKV+ K Q KEQ DKEKWWRV+LHNDDIHTF+YVT  +T+  + L+ + AY IT E H AGKATV+  WKS AE  C+ LQQ GLT SIAPDSKF G  GD+
Sbjct:  149 GIALIEKVDRKAQMKEQFDKEKWWRVLLHNDDIHTFEYVTSCLTRTCQHLSRRKAYNITWEAHSAGKATVSCVWKSLAEQQCVKLQQLGLTTSIAPDSKFEGNKGDQ 255          
BLAST of jgi.p|Trimin1|160126 vs. uniprot
Match: A0A813J9Y2_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813J9Y2_POLGL)

HSP 1 Score: 129 bits (323), Expect = 9.340e-35
Identity = 65/106 (61.32%), Postives = 79/106 (74.53%), Query Frame = 0
Query:    9 GCRVKEKVEDKVQRKEQLDKEKWWRVILHNDDIHTFDYVTLSITKVVKKLTMKIAYEITMETHKAGKATVTQAWKSQAETYCLGLQQCGLTASIAPDSKF--GKGG 112
            G  V +KV+ K + KE+ +KEKWWRV+LHNDDIHTF+YVT  +TKVV+ LT + AY IT E H +GKATV   WK+ AE +C+ LQQ GLT SIAPDSKF   KGG
Sbjct:  125 GIAVMDKVDMKTRMKEEFEKEKWWRVLLHNDDIHTFEYVTNCLTKVVQHLTRRKAYNITWEAHSSGKATVACVWKALAEQFCVKLQQDGLTVSIAPDSKFEGNKGG 230          
BLAST of jgi.p|Trimin1|160126 vs. uniprot
Match: A0A7S2GQ17_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GQ17_9STRA)

HSP 1 Score: 122 bits (306), Expect = 2.120e-33
Identity = 60/95 (63.16%), Postives = 73/95 (76.84%), Query Frame = 0
Query:   14 EKVEDKVQRKEQLDKEKWWRVILHNDDIHTFDYVTLSITKVVKKLTMKIAYEITMETHKAGKATVTQAWKSQAETYCLGLQQCGLTASIAPDSKF 108
            +KV+++VQ KE L++E WWRV+LHND+IHTF+YVT +I K+  +LT K AY IT  TH AG ATVT  WKS AE  CLGLQ  GLT SIAPD+KF
Sbjct:   26 DKVDNEVQEKEDLNEEGWWRVLLHNDEIHTFEYVTEAIVKICPQLTRKKAYMITRTTHGAGVATVTTVWKSLAEQMCLGLQTFGLTVSIAPDAKF 120          
BLAST of jgi.p|Trimin1|160126 vs. uniprot
Match: A0A7S1T7M9_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T7M9_9RHOD)

HSP 1 Score: 121 bits (303), Expect = 1.290e-32
Identity = 59/96 (61.46%), Postives = 72/96 (75.00%), Query Frame = 0
Query:   15 KVEDKVQRKEQLDKEKWWRVILHNDDIHTFDYVTLSITKVVKKLTMKIAYEITMETHKAGKATVTQAWKSQAETYCLGLQQCGLTASIAPDSKFGK 110
            K + K +R+EQ DKE  WRV+LHNDD+HTFDYVT+SI KVV+ ++ K A+ ITM+ H  G ATVT  WK+ AE YC GLQ  GLT+SIAPDS F K
Sbjct:   62 KKKPKTRREEQTDKEPSWRVLLHNDDVHTFDYVTMSIVKVVRTISRKKAHRITMQAHSQGVATVTTTWKALAEEYCKGLQMHGLTSSIAPDSSFKK 157          
BLAST of jgi.p|Trimin1|160126 vs. uniprot
Match: A0A7S3U5D7_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3U5D7_9SPIT)

HSP 1 Score: 118 bits (296), Expect = 5.360e-32
Identity = 61/98 (62.24%), Postives = 71/98 (72.45%), Query Frame = 0
Query:   19 KVQRKEQLDKEKWWRVILHNDDIHTFDYVTLSITKVVKKLTMKIAYEITMETHKAGKATVTQAWKSQAETYCLGLQQCGLTASIAPDSKF--GKGGDE 114
            K + KEQ  KEKWWRV+LHNDDIHTF+YVT  +TK V+ LT + AY IT E H +GKATV   WK+ AE + + LQQ GLT SIAPDSKF   KGG E
Sbjct:   25 KAKMKEQFAKEKWWRVLLHNDDIHTFEYVTGCLTKTVQHLTRRKAYNITWEAHSSGKATVACVWKNLAEQFSVKLQQDGLTVSIAPDSKFEGNKGGGE 122          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|160126 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZHY3_9STRA4.400e-7899.21Ribosomal protein L7/L12, C-terminal/adaptor prote... [more]
A0A835ZBL6_9STRA8.900e-5898.92Ribosomal protein L7/L12, C-terminal/adaptor prote... [more]
D8LIY1_ECTSI6.260e-5080.19ClpS domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A7S1RIS0_ALECA1.190e-3662.26Hypothetical protein n=1 Tax=Alexandrium catenella... [more]
A0A812W203_9DINO3.140e-3562.26CPLS1 protein n=2 Tax=Symbiodinium TaxID=2949 RepI... [more]
A0A7S3M2P1_9STRA8.580e-3561.68Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A813J9Y2_POLGL9.340e-3561.32Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
A0A7S2GQ17_9STRA2.120e-3363.16Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1T7M9_9RHOD1.290e-3261.46Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S3U5D7_9SPIT5.360e-3262.24Hypothetical protein n=1 Tax=Strombidinopsis acumi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003769Adaptor protein ClpS, corePFAMPF02617ClpScoord: 28..95
e-value: 8.5E-17
score: 60.7
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeGENE3D3.30.1390.10coord: 10..104
e-value: 1.4E-20
score: 74.8
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeSUPERFAMILY54736ClpS-likecoord: 25..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 107..126
NoneNo IPR availablePANTHERPTHR33473:SF1ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS1, CHLOROPLASTICcoord: 20..106
IPR022935ATP-dependent Clp protease adaptor protein ClpSPANTHERPTHR33473ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS1, CHLOROPLASTICcoord: 20..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_12contigContig_12:245257..246997 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|160126mRNA_3705Tribonema minus UTEX_B_3156 mRNAContig_12 245257..246997 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|160126|e_gw1.12.136.1 ID=Trimin1|160126|e_gw1.12.136.1|Name=jgi.p|Trimin1|160126|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=127bp
MSKPLLVLGCRVKEKVEDKVQRKEQLDKEKWWRVILHNDDIHTFDYVTLS
ITKVVKKLTMKIAYEITMETHKAGKATVTQAWKSQAETYCLGLQQCGLTA
SIAPDSKFGKGGDEGGDGGGPEGGSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003769ClpS_core
IPR014719Ribosomal_L7/12_C/ClpS-like
IPR022935ClpS