Trimin1|160091|e_gw1.12.306.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|160091
Unique NameTrimin1|160091|e_gw1.12.306.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length191
Homology
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BLAST of jgi.p|Trimin1|160091 vs. uniprot
Match: A0A835ZDN5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDN5_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 6.870e-6
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0 
Query:    1 LAANALTALPDEICGLAALRELNLLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLRCTHLSLNFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEIGAAP 131
            LAANALTALPDEICGLAALRELNLLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLRCTHLSLNFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEIGAAP
Sbjct:    1 LAANALTALPDEICGLAALRELNLLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLRCTHLSLNFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEIGAAP 131
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|160091 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835ZDN5_9STRA6.870e-6100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00364LRR_bac_2coord: 130..149
e-value: 43.0
score: 8.9
coord: 107..126
e-value: 290.0
score: 2.5
coord: 39..58
e-value: 140.0
score: 5.0
coord: 62..81
e-value: 38.0
score: 9.3
coord: 153..172
e-value: 390.0
score: 1.6
coord: 16..35
e-value: 120.0
score: 5.5
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 4..137
coord: 89..185
NoneNo IPR availablePANTHERPTHR16083:SF26LEUCINE-RICH REPEAT-CONTAINING PROTEIN SOG2coord: 4..137
coord: 89..185
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 2..184
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 39..61
e-value: 0.14
score: 21.2
coord: 107..130
e-value: 4.9
score: 15.8
coord: 62..85
e-value: 3.4
score: 16.6
coord: 16..38
e-value: 16.0
score: 11.7
coord: 153..175
e-value: 1.1
score: 18.3
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 131..185
e-value: 1.5E-6
score: 27.8
coord: 41..97
e-value: 1.1E-6
score: 28.3
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 1..187
e-value: 1.2E-46
score: 160.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_12contigContig_12:1235351..1237900 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|160091mRNA_3813Tribonema minus UTEX_B_3156 mRNAContig_12 1235351..1237900 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|160091|e_gw1.12.306.1 ID=Trimin1|160091|e_gw1.12.306.1|Name=jgi.p|Trimin1|160091|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=191bp
LAANALTALPDEICGLAALRELNLLGNALRELPARIGALAQLRRLELAGN
KLEALPPSFGNLTRLKRIVLDCNRLRALPETLGTLRCTHLSLNFNRLGAL
PRCVKDMPRLRALRVDGNGLRALPGEIGAAPRLATLSACGNRITQLPDSL
CALAALRRLWLDHNFLASLPSDFHRLEALEELRLEVRAID*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf