Trimin1|159246|e_gw1.8.94.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|159246
Unique Name	Trimin1\|159246\|e_gw1.8.94.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	114

Homology

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BLAST of jgi.p|Trimin1|159246 vs. uniprot
Match: A0A835YJU8_9STRA (PAS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJU8_9STRA)

HSP 1 Score: 238 bits (607), Expect = 1.010e-79
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0

Query:    1 MFCITDPVMHDNPIVFVSDGFIEMTGYNRYEINGINCRFLQGHDTSPEDVAVIRNAINERKHARVCLLNYRKDGTTFINQFNISPLRDANGRLAYFIGVQMEVEGESPVEARC 113
            MFCITDPVMHDNPIVFVSDGFIEMTGYNRYEINGINCRFLQGHDTSPEDVAVIRNAINERKHARVCLLNYRKDGTTFINQFNISPLRDANGRLAYFIGVQMEVEGESPVEARC
Sbjct:    1 MFCITDPVMHDNPIVFVSDGFIEMTGYNRYEINGINCRFLQGHDTSPEDVAVIRNAINERKHARVCLLNYRKDGTTFINQFNISPLRDANGRLAYFIGVQMEVEGESPVEARC 113

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BLAST of jgi.p|Trimin1|159246 vs. uniprot
Match: A0A836CEL0_9STRA (Structural basis For light-dependent signaling in the dimeric Lov Photosensor Ytva n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEL0_9STRA)

HSP 1 Score: 199 bits (505), Expect = 8.520e-64
Identity = 92/104 (88.46%), Postives = 97/104 (93.27%), Query Frame = 0

Query:    1 MFCITDPVMHDNPIVFVSDGFIEMTGYNRYEINGINCRFLQGHDTSPEDVAVIRNAINERKHARVCLLNYRKDGTTFINQFNISPLRDANGRLAYFIGVQMEVE 104
            MFCITDP MHDNPIV+VSDGFI+MTGYNRYEINGINCRFLQGHDTSPEDV VIR A+ ERKHARVCLLNYRKDGT FINQFNISPLRD +G LAYFIGVQM+VE
Sbjct:    1 MFCITDPAMHDNPIVYVSDGFIDMTGYNRYEINGINCRFLQGHDTSPEDVDVIRTALKERKHARVCLLNYRKDGTRFINQFNISPLRDVDGELAYFIGVQMQVE 104

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BLAST of jgi.p|Trimin1|159246 vs. uniprot
Match: A0A126X2B5_9PHAE (Putative LOV domain-containing protein n=4 Tax=Sargassum TaxID=3015 RepID=A0A126X2B5_9PHAE)

HSP 1 Score: 166 bits (420), Expect = 2.670e-47
Identity = 77/104 (74.04%), Postives = 90/104 (86.54%), Query Frame = 0

Query:    1 MFCITDPVMHDNPIVFVSDGFIEMTGYNRYEINGINCRFLQGHDTSPEDVAVIRNAINERKHARVCLLNYRKDGTTFINQFNISPLRDANGRLAYFIGVQMEVE 104
            MFCITDP ++DNPIVFVSD F++MTGY+R EINGINCRFLQG  TSPEDV VIR  I E+   RVCLLNYRK+GT F+NQFN+SPLRD +G+LA+FIGVQ+EVE
Sbjct:  240 MFCITDPELYDNPIVFVSDDFVDMTGYDREEINGINCRFLQGEMTSPEDVEVIRYGIREQTDMRVCLLNYRKNGTAFLNQFNLSPLRDVSGKLAFFIGVQIEVE 343

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BLAST of jgi.p|Trimin1|159246 vs. uniprot
Match: A0A126WYY5_9PHAE (Putative LOV domain-containing protein n=2 Tax=Sargassum TaxID=3015 RepID=A0A126WYY5_9PHAE)

HSP 1 Score: 166 bits (419), Expect = 4.060e-47
Identity = 77/104 (74.04%), Postives = 89/104 (85.58%), Query Frame = 0

Query:    1 MFCITDPVMHDNPIVFVSDGFIEMTGYNRYEINGINCRFLQGHDTSPEDVAVIRNAINERKHARVCLLNYRKDGTTFINQFNISPLRDANGRLAYFIGVQMEVE 104
            MFCITDP ++DNPIVFVSD F++MTGY+R EINGINCRFLQG  TSPEDV VIR  I E+   RVCLLNYRK+GT F+NQFN+SPLRD  G+LA+FIGVQ+EVE
Sbjct:  241 MFCITDPELYDNPIVFVSDDFVDMTGYDREEINGINCRFLQGEMTSPEDVEVIRYGIREQTDMRVCLLNYRKNGTAFLNQFNLSPLRDVTGKLAFFIGVQIEVE 344

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BLAST of jgi.p|Trimin1|159246 vs. uniprot
Match: A0A126WUS3_9PHAE (Putative LOV domain-containing protein n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A126WUS3_9PHAE)

HSP 1 Score: 163 bits (413), Expect = 1.840e-46
Identity = 77/104 (74.04%), Postives = 87/104 (83.65%), Query Frame = 0

Query:    1 MFCITDPVMHDNPIVFVSDGFIEMTGYNRYEINGINCRFLQGHDTSPEDVAVIRNAINERKHARVCLLNYRKDGTTFINQFNISPLRDANGRLAYFIGVQMEVE 104
            MFCITDP ++DNPIVFVSD F++MTGYNR EINGINCRFLQG  TS EDV VIR  I E    RVCLLNYRK+GT F+NQFN+SPLRD  G+LA+FIGVQ+EVE
Sbjct:  226 MFCITDPDLYDNPIVFVSDDFVDMTGYNREEINGINCRFLQGEMTSTEDVDVIRYGIREEADMRVCLLNYRKNGTAFLNQFNLSPLRDTEGKLAFFIGVQIEVE 329

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BLAST of jgi.p|Trimin1|159246 vs. uniprot
Match: A0A126WZ23_9PHAE (Putative LOV domain-containing protein n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A126WZ23_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 2.160e-46
Identity = 76/104 (73.08%), Postives = 87/104 (83.65%), Query Frame = 0

Query:    1 MFCITDPVMHDNPIVFVSDGFIEMTGYNRYEINGINCRFLQGHDTSPEDVAVIRNAINERKHARVCLLNYRKDGTTFINQFNISPLRDANGRLAYFIGVQMEVE 104
            MFCITDP ++DNPIVFVSD F++MTGYNR EINGINCRFLQG  TS EDV VIR  + E    RVCLLNYRK+GT F+NQFN+SPLRD  G+LA+FIGVQ+EVE
Sbjct:  231 MFCITDPELYDNPIVFVSDDFVDMTGYNREEINGINCRFLQGEMTSTEDVDVIRYGLREETDMRVCLLNYRKNGTAFLNQFNLSPLRDTEGKLAFFIGVQIEVE 334

[Close]

BLAST of jgi.p|Trimin1|159246 vs. uniprot
Match: A0A126WYG5_9PHAE (Putative LOV domain-containing protein n=1 Tax=Desmarestia viridis TaxID=62313 RepID=A0A126WYG5_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 2.800e-46
Identity = 76/104 (73.08%), Postives = 88/104 (84.62%), Query Frame = 0

Query:    1 MFCITDPVMHDNPIVFVSDGFIEMTGYNRYEINGINCRFLQGHDTSPEDVAVIRNAINERKHARVCLLNYRKDGTTFINQFNISPLRDANGRLAYFIGVQMEVE 104
            MFCITDP ++DNPIVFVSD F++MTGYNR EINGINCRFLQG  TS EDV VIR  + E    RVCLLNYRK+GT F+NQFN+SPLRD +G+LA+FIGVQ+EVE
Sbjct:  228 MFCITDPDLYDNPIVFVSDDFVDMTGYNREEINGINCRFLQGEMTSTEDVDVIRYGLREETDMRVCLLNYRKNGTAFLNQFNLSPLRDTSGKLAFFIGVQIEVE 331

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BLAST of jgi.p|Trimin1|159246 vs. uniprot
Match: A0A126X116_9PHAE (Putative LOV domain-containing protein n=1 Tax=Colpomenia sinuosa TaxID=87236 RepID=A0A126X116_9PHAE)

HSP 1 Score: 162 bits (411), Expect = 4.350e-46
Identity = 75/104 (72.12%), Postives = 88/104 (84.62%), Query Frame = 0

Query:    1 MFCITDPVMHDNPIVFVSDGFIEMTGYNRYEINGINCRFLQGHDTSPEDVAVIRNAINERKHARVCLLNYRKDGTTFINQFNISPLRDANGRLAYFIGVQMEVE 104
            MFCITDP ++DNPI+FVSD F++MTGYNR EINGINCRFLQG  TS EDV VIR  + E    RVCLLNYRK+GT F+NQFN+SPLRD +G+LA+FIGVQ+EVE
Sbjct:  230 MFCITDPDLYDNPIIFVSDDFVDMTGYNREEINGINCRFLQGEMTSTEDVDVIRYGLREETDMRVCLLNYRKNGTAFLNQFNLSPLRDTSGKLAFFIGVQIEVE 333

[Close]

BLAST of jgi.p|Trimin1|159246 vs. uniprot
Match: A0A126X2X3_PETFA (Putative LOV domain-containing protein n=2 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A126X2X3_PETFA)

HSP 1 Score: 162 bits (411), Expect = 4.520e-46
Identity = 75/104 (72.12%), Postives = 88/104 (84.62%), Query Frame = 0

Query:    1 MFCITDPVMHDNPIVFVSDGFIEMTGYNRYEINGINCRFLQGHDTSPEDVAVIRNAINERKHARVCLLNYRKDGTTFINQFNISPLRDANGRLAYFIGVQMEVE 104
            MFCITDP ++DNPI+FVSD F++MTGYNR EINGINCRFLQG  TS EDV VIR  + E    RVCLLNYRK+GT F+NQFN+SPLRD +G+LA+FIGVQ+EVE
Sbjct:  231 MFCITDPDLYDNPIIFVSDDFVDMTGYNREEINGINCRFLQGEMTSTEDVDVIRYGLREETDMRVCLLNYRKNGTAFLNQFNLSPLRDTSGKLAFFIGVQIEVE 334

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BLAST of jgi.p|Trimin1|159246 vs. uniprot
Match: A0A126WVB3_9PHAE (Putative LOV domain-containing protein n=1 Tax=Punctaria latifolia TaxID=90013 RepID=A0A126WVB3_9PHAE)

HSP 1 Score: 162 bits (411), Expect = 4.890e-46
Identity = 75/104 (72.12%), Postives = 88/104 (84.62%), Query Frame = 0

Query:    1 MFCITDPVMHDNPIVFVSDGFIEMTGYNRYEINGINCRFLQGHDTSPEDVAVIRNAINERKHARVCLLNYRKDGTTFINQFNISPLRDANGRLAYFIGVQMEVE 104
            MFCITDP ++DNPI+FVSD F++MTGYNR EINGINCRFLQG  TS EDV VIR  + E    RVCLLNYRK+GT F+NQFN+SPLRD +G+LA+FIGVQ+EVE
Sbjct:  229 MFCITDPDLYDNPIIFVSDDFVDMTGYNREEINGINCRFLQGEMTSSEDVDVIRYGLREETDMRVCLLNYRKNGTAFLNQFNLSPLRDTSGKLAFFIGVQIEVE 332

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|159246 vs. uniprot

BLAST of jgi.p|Trimin1|159246 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YJU8_9STRA	1.010e-79	100.00	PAS domain-containing protein n=1 Tax=Tribonema mi...	[more]
A0A836CEL0_9STRA	8.520e-64	88.46	Structural basis For light-dependent signaling in ...	[more]
A0A126X2B5_9PHAE	2.670e-47	74.04	Putative LOV domain-containing protein n=4 Tax=Sar...	[more]
A0A126WYY5_9PHAE	4.060e-47	74.04	Putative LOV domain-containing protein n=2 Tax=Sar...	[more]
A0A126WUS3_9PHAE	1.840e-46	74.04	Putative LOV domain-containing protein n=1 Tax=Ish...	[more]
A0A126WZ23_9PHAE	2.160e-46	73.08	Putative LOV domain-containing protein n=1 Tax=Dic...	[more]
A0A126WYG5_9PHAE	2.800e-46	73.08	Putative LOV domain-containing protein n=1 Tax=Des...	[more]
A0A126X116_9PHAE	4.350e-46	72.12	Putative LOV domain-containing protein n=1 Tax=Col...	[more]
A0A126X2X3_PETFA	4.520e-46	72.12	Putative LOV domain-containing protein n=2 Tax=Scy...	[more]
A0A126WVB3_9PHAE	4.890e-46	72.12	Putative LOV domain-containing protein n=1 Tax=Pun...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001610	PAC motif	SMART	SM00086	pac_2	coord: 64..106 e-value: 5.0E-5 score: 32.7
IPR000014	PAS domain	PFAM	PF13426	PAS_9	coord: 8..100 e-value: 2.4E-19 score: 69.6
IPR000014	PAS domain	TIGRFAM	TIGR00229	TIGR00229	coord: 11..100 e-value: 9.3E-12 score: 43.2
IPR000014	PAS domain	CDD	cd00130	PAS	coord: 2..103 e-value: 5.31536E-6 score: 39.9239
None	No IPR available	GENE3D	3.30.450.20	PAS domain	coord: 1..112 e-value: 3.1E-41 score: 142.8
None	No IPR available	PANTHER	PTHR47429	PROTEIN TWIN LOV 1	coord: 2..106
IPR000700	PAS-associated, C-terminal	PROSITE	PS50113	PAC	coord: 61..113 score: 10.374741
IPR035965	PAS domain superfamily	SUPERFAMILY	55785	PYP-like sensor domain (PAS domain)	coord: 2..101

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_8	contig	Contig_8:480951..484061 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|159246	mRNA_2768	Tribonema minus UTEX_B_3156	mRNA	Contig_8 480951..484061 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|159246|e_gw1.8.94.1 ID=Trimin1|159246|e_gw1.8.94.1|Name=jgi.p|Trimin1|159246|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=114bp
MFCITDPVMHDNPIVFVSDGFIEMTGYNRYEINGINCRFLQGHDTSPEDV
AVIRNAINERKHARVCLLNYRKDGTTFINQFNISPLRDANGRLAYFIGVQ
MEVEGESPVEARC*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001610	PAC
IPR000014	PAS
IPR000700	PAS-assoc_C
IPR035965	PAS-like_dom_sf