Trimin1|159141|e_gw1.8.246.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|159141
Unique NameTrimin1|159141|e_gw1.8.246.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length665
Homology
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BLAST of jgi.p|Trimin1|159141 vs. uniprot
Match: A0A835YKY7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKY7_9STRA)

HSP 1 Score: 499 bits (1285), Expect = 9.180e-166
Identity = 664/664 (100.00%), Postives = 664/664 (100.00%), Query Frame = 0 
Query:    1 MSICRGVEWLPHCVGDLSALTDLWVCRDAERARLPDSVGDLVTLTTLQISGRLCTLPASIGNLYALTKLFIVDCDWLTAXXXXXXXXXXXXXXXXASCAMTGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDALTALPSSLGSQRSLRKLFLEELPITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVFSPLLXXXXXXXXXXXXXXXLNLWRCEDLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVHGCAWLLDGAPDAIRAAASDLPLLRALVRVTEAGPCADALALAKSMSIRGGMEWLPHCVGDLSALTDLDLSDAERARLXXXXXXXXXXXXXXXSGCGRLRTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLASCAMTGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVLTALPGSLGSLRSLRKLFLEELPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARTPVSNACLAVXXXXXXXXXXXXXXXXXXXDELXXXXXXXXXXXXLRVLDVGCCRTLKRXXXXXXXXXXXXXXXXHGCEWLLDGAPDSVRAAASNFNPYAEDW 664
            MSICRGVEWLPHCVGDLSALTDLWVCRDAERARLPDSVGDLVTLTTLQISGRLCTLPASIGNLYALTKLFIVDCDWLTAXXXXXXXXXXXXXXXXASCAMTGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDALTALPSSLGSQRSLRKLFLEELPITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVFSPLLXXXXXXXXXXXXXXXLNLWRCEDLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVHGCAWLLDGAPDAIRAAASDLPLLRALVRVTEAGPCADALALAKSMSIRGGMEWLPHCVGDLSALTDLDLSDAERARLXXXXXXXXXXXXXXXSGCGRLRTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLASCAMTGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVLTALPGSLGSLRSLRKLFLEELPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARTPVSNACLAVXXXXXXXXXXXXXXXXXXXDELXXXXXXXXXXXXLRVLDVGCCRTLKRXXXXXXXXXXXXXXXXHGCEWLLDGAPDSVRAAASNFNPYAEDW
Sbjct:    1 MSICRGVEWLPHCVGDLSALTDLWVCRDAERARLPDSVGDLVTLTTLQISGRLCTLPASIGNLYALTKLFIVDCDWLTAXXXXXXXXXXXXXXXXASCAMTGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDALTALPSSLGSQRSLRKLFLEELPITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVFSPLLXXXXXXXXXXXXXXXLNLWRCEDLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVHGCAWLLDGAPDAIRAAASDLPLLRALVRVTEAGPCADALALAKSMSIRGGMEWLPHCVGDLSALTDLDLSDAERARLXXXXXXXXXXXXXXXSGCGRLRTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLASCAMTGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVLTALPGSLGSLRSLRKLFLEELPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARTPVSNACLAVXXXXXXXXXXXXXXXXXXXDELXXXXXXXXXXXXLRVLDVGCCRTLKRXXXXXXXXXXXXXXXXHGCEWLLDGAPDSVRAAASNFNPYAEDW 664
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|159141 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YKY7_9STRA9.180e-166100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 580..604
e-value: 280.0
score: 1.4
coord: 275..299
e-value: 350.0
score: 0.6
coord: 228..251
e-value: 24.0
score: 10.1
coord: 369..392
e-value: 180.0
score: 3.0
coord: 440..463
e-value: 13.0
score: 12.4
coord: 87..110
e-value: 25.0
score: 10.0
coord: 511..534
e-value: 68.0
score: 6.4
coord: 205..227
e-value: 110.0
score: 4.7
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 1..320
e-value: 2.6E-60
score: 205.7
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 351..563
e-value: 2.4E-46
score: 159.7
coord: 564..650
e-value: 4.7E-14
score: 53.6
NoneNo IPR availablePANTHERPTHR47186LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57coord: 145..309
coord: 476..639
coord: 360..591
coord: 9..193
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 359..642
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 8..322

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_8contigContig_8:1611917..1615797 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|159141mRNA_2881Tribonema minus UTEX_B_3156 mRNAContig_8 1611917..1615797 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|159141|e_gw1.8.246.1 ID=Trimin1|159141|e_gw1.8.246.1|Name=jgi.p|Trimin1|159141|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=665bp
MSICRGVEWLPHCVGDLSALTDLWVCRDAERARLPDSVGDLVTLTTLQIS
GRLCTLPASIGNLYALTKLFIVDCDWLTALPATIGNLKSLSRLHLASCAM
TGLPACLSQLEALTKLSIVLLSELKSLPPRLGDLAALTELTISQCDALTA
LPSSLGSQRSLRKLFLEELPITTLPDSIGGLAALTSLEVHTCRAFSRLPH
GVGELRALTRLSLVECGLTALPGALCRLSALVHLDVFSPLLTALPTRLCD
LRALTRLNLWRCEDLVALPDSICDLQSLRVLDVGCCRTLKRLPARMGELT
ALSGLGVHGCAWLLDGAPDAIRAAASDLPLLRALVRVTEAGPCADALALA
KSMSIRGGMEWLPHCVGDLSALTDLDLSDAERARLPDSIGDLVTLTTLQI
SGCGRLRTLPASIGSLHALTQLFIEDCDELTALPSTIGNLKSLTSLDLAS
CAMTGLPARLIQLEALTELSIVSLSELKSLPPRLGDLAALTELTLSQCDV
LTALPGSLGSLRSLRKLFLEELPIKTLPTSIGGLAALTSLDVHACHNFSR
LPHGVSELRAARTPVSNACLAVLPARLGDLRALTRLDLSMCDELVALPDS
ICDLQSLRVLDVGCCRTLKRLPARMGELTALSALGVHGCEWLLDGAPDSV
RAAASNFNPYAEDW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf