Trimin1|158914|e_gw1.7.340.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|158914
Unique NameTrimin1|158914|e_gw1.7.340.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length378
Homology
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BLAST of jgi.p|Trimin1|158914 vs. uniprot
Match: A0A835YP88_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP88_9STRA)

HSP 1 Score: 210 bits (534), Expect = 5.140e-61
Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 0 
Query:    1 MTTHAADVDVQRDALAAMERLCANDANNAKLGEAGACERLAESMRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAPDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYDAEVRWHAIXXXXXXXXXXXXXXXXXXXXXXGHLIDGMRTIAVATHMIIIGAXXXXXXXXXXXXXXXXXXXXXXXVLFMRGHSGSATIEQEALAVRVMTKLGXXXXXXXXXXXXXXXXLVADLMWLHVADVGVQRHVLKAVAML 273
            MTTHAADVDVQRDALAAMERLCANDANNAKLGEAGACERLAESMRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAPDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYDAEVRWHAIXXXXXXXXXXXXXXXXXXXXXXGHLIDGMRTIAVATHMIIIGAXXXXXXXXXXXXXXXXXXXXXXXVLFMRGHSGSATIEQEALAVRVMTKLGXXXXXXXXXXXXXXXXLVADLMWLHVADVGVQRHVLKAVAML
Sbjct:    1 MTTHAADVDVQRDALAAMERLCANDANNAKLGEAGACERLAESMRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAPDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYDAEVRWHAIXXXXXXXXXXXXXXXXXXXXXXGHLIDGMRTIAVATHMIIIGAXXXXXXXXXXXXXXXXXXXXXXXVLFMRGHSGSATIEQEALAVRVMTKLGXXXXXXXXXXXXXXXXLVADLMWLHVADVGVQRHVLKAVAML 273
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|158914 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YP88_9STRA5.140e-61100.00Armadillo-type protein n=1 Tax=Tribonema minus Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 2..96
e-value: 5.6E-10
score: 40.1
coord: 97..375
e-value: 1.3E-23
score: 85.1
IPR045156Vacuolar protein 8PANTHERPTHR47249VACUOLAR PROTEIN 8coord: 181..351
coord: 4..78
coord: 93..244
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 7..302

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_7contigContig_7:1507982..1509115 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|158914mRNA_2632Tribonema minus UTEX_B_3156 mRNAContig_7 1507982..1509115 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|158914|e_gw1.7.340.1 ID=Trimin1|158914|e_gw1.7.340.1|Name=jgi.p|Trimin1|158914|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=378bp
MTTHAADVDVQRDALAAMERLCANDANNAKLGEAGACERLAESMRAHVSS
AAIQQQALRAIAQLGKNVANRVKLGEAGVCDLLAERMREHAPDALRAVVT
LGKGSANRSKLGEAGVCKLVMRALTMHAYDAEVRWHAIQAIARLGENDAN
KVKLGEAGACGHLIDGMRTIAVATHMIIIGAVGTLCENDANNAKFGEAGA
CERLVLFMRGHSGSATIEQEALAVRVMTKLGKNSLNNAKLGEARACELVA
DLMWLHVADVGVQRHVLKAVAMLAENDANNAKLGEAGACGLLVESMRAHA
DDAAVQAFALCAIETFGRDGANRVELGQAGVCEVLVHAMRACAGHAVRLA
AVVRAIAVLSRNDANSARLGLLLSQPQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR045156Vac8
IPR016024ARM-type_fold