Trimin1|158846|e_gw1.7.168.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|158846
Unique Name	Trimin1\|158846\|e_gw1.7.168.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	225

Homology

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BLAST of jgi.p|Trimin1|158846 vs. uniprot
Match: A0A835YPB3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPB3_9STRA)

HSP 1 Score: 400 bits (1027), Expect = 3.950e-140
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0

Query:    1 MLVRQNAQELSDGGVCRLLLDALSTHPADARIQEAACRAVGYCAEASPGMRGELGDLTAGELDGCQLVCRALQLHPEQSLVQKWGLFAVMAMAQCQQNAVKLGCAGACTCAMEALRLHAGDRDVQETACQAVGKCSDASAALRDELGRLGACELVRTALQLHPASVLTQVWGLYAVACLAQSHSCALEXXXXXXXXXXXXXXXXXXXEADAQVRFRRRVPHHAS 224
            MLVRQNAQELSDGGVCRLLLDALSTHPADARIQEAACRAVGYCAEASPGMRGELGDLTAGELDGCQLVCRALQLHPEQSLVQKWGLFAVMAMAQCQQNAVKLGCAGACTCAMEALRLHAGDRDVQETACQAVGKCSDASAALRDELGRLGACELVRTALQLHPASVLTQVWGLYAVACLAQSHSCALEXXXXXXXXXXXXXXXXXXXEADAQVRFRRRVPHHAS
Sbjct:    1 MLVRQNAQELSDGGVCRLLLDALSTHPADARIQEAACRAVGYCAEASPGMRGELGDLTAGELDGCQLVCRALQLHPEQSLVQKWGLFAVMAMAQCQQNAVKLGCAGACTCAMEALRLHAGDRDVQETACQAVGKCSDASAALRDELGRLGACELVRTALQLHPASVLTQVWGLYAVACLAQSHSCALEXXXXXXXXXXXXXXXXXXXEADAQVRFRRRVPHHAS 224

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BLAST of jgi.p|Trimin1|158846 vs. uniprot
Match: A0A836CAT7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAT7_9STRA)

HSP 1 Score: 158 bits (400), Expect = 4.080e-41
Identity = 78/132 (59.09%), Postives = 100/132 (75.76%), Query Frame = 0

Query:    1 MLVRQNAQELSDGGVCRLLLDALSTHPADARIQEAACRAVGYCAEASPGMRGELGDLTAGELDGCQLVCRALQLHPEQSLVQKWGLFAVMAMAQCQQNAVKLGCAGACTCAMEALRLHAGDRDVQETACQAV 132
            MLV QN + L  GGVC+LLL+A+  +P DA IQEAAC+AVG CAEASP M+ +L +L AG LDGC+L+C+A+QLHP+ +L Q WGLFA+ AMAQCQQ+A++LG AGAC   ++ALR H    D+Q   C AV
Sbjct:   72 MLVGQNHEHLLQGGVCQLLLEAMVAYPNDAGIQEAACQAVGCCAEASPDMKNQLAELNAGGLDGCRLMCQAMQLHPQANLTQSWGLFAITAMAQCQQDALRLGRAGACVVTVQALRSHTQGADLQAHGCAAV 203

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BLAST of jgi.p|Trimin1|158846 vs. uniprot
Match: A0A836C9T8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9T8_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 7.590e-16
Identity = 53/126 (42.06%), Postives = 71/126 (56.35%), Query Frame = 0

Query:    1 MLVRQNAQELSDGGVCRLLLDALSTHPADARIQEAACRAVGYCAEASPGMRGELGDLTAGELDGCQLVCRALQLHPEQSLVQKWGLFAVMAMAQCQQNAVKLGCAGACTCAMEALRLHAGDRDVQE 126
            +L +QN + L +GGV  LL   L  H AD+ IQEAAC+AVG                            +ALQLHP++  VQ WG +AV  +AQ ++NA++LG AGAC   +EALR + GD +VQE
Sbjct:   50 VLAKQNYKVLFEGGVGGLLTHTLEAHSADSGIQEAACQAVG----------------------------KALQLHPQRVRVQTWGAYAVGCLAQGEENAIRLGRAGACEGVVEALRRYRGDAEVQE 147

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BLAST of jgi.p|Trimin1|158846 vs. uniprot
Match: A0A835YRP9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRP9_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 4.170e-10
Identity = 35/53 (66.04%), Postives = 40/53 (75.47%), Query Frame = 0

Query:   50 MRGELGDLTAGELDGCQLVCRALQLHPEQSLVQKWGLFAVMAMAQCQQNAVKL 102
            MR +L +L AG L GCQLVCRALQ H + S VQ WGL AVMA+A  QQNAV+L
Sbjct:    1 MRDQLAELKAGGLGGCQLVCRALQRHMKSSRVQAWGLSAVMALALSQQNAVRL 53

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|158846 vs. uniprot

BLAST of jgi.p|Trimin1|158846 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A835YPB3_9STRA	3.950e-140	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CAT7_9STRA	4.080e-41	59.09	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836C9T8_9STRA	7.590e-16	42.06	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YRP9_9STRA	4.170e-10	66.04	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 2..216 e-value: 1.2E-13 score: 52.6
None	No IPR available	PANTHER	PTHR22895:SF7	PROTEIN AARDVARK	coord: 11..131
None	No IPR available	PANTHER	PTHR22895	UNCHARACTERIZED	coord: 11..131
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 6..202

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_7	contig	Contig_7:1854577..1859454 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|158846	mRNA_2682	Tribonema minus UTEX_B_3156	mRNA	Contig_7 1854577..1859454 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|158846|e_gw1.7.168.1 ID=Trimin1|158846|e_gw1.7.168.1|Name=jgi.p|Trimin1|158846|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=225bp
MLVRQNAQELSDGGVCRLLLDALSTHPADARIQEAACRAVGYCAEASPGM
RGELGDLTAGELDGCQLVCRALQLHPEQSLVQKWGLFAVMAMAQCQQNAV
KLGCAGACTCAMEALRLHAGDRDVQETACQAVGKCSDASAALRDELGRLG
ACELVRTALQLHPASVLTQVWGLYAVACLAQSHSCALEFGRAGTCEVVLA
GIHAHPSEADAQVRFRRRVPHHAS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011989	ARM-like
IPR016024	ARM-type_fold