Trimin1|158700|e_gw1.6.104.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|158700
Unique NameTrimin1|158700|e_gw1.6.104.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length164
Homology
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BLAST of jgi.p|Trimin1|158700 vs. uniprot
Match: A0A836CAR9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAR9_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 4.090e-13
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 0 
Query:    1 MRKHVDAVHLGIKSVPCTHEGCGQSFTTKQMM 32
            MRKHVDAVHLGIKSVPCTHEGCGQSFTTKQMM
Sbjct:    1 MRKHVDAVHLGIKSVPCTHEGCGQSFTTKQMM 32
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|158700 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CAR9_9STRA4.090e-13100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 15..40
e-value: 0.01
score: 25.0
coord: 46..71
e-value: 1.6
score: 17.7
coord: 108..133
e-value: 0.078
score: 22.1
coord: 139..164
e-value: 0.0074
score: 25.5
coord: 77..102
e-value: 0.0091
score: 25.2
IPR013087Zinc finger C2H2-typePFAMPF00096zf-C2H2coord: 17..40
e-value: 0.0055
score: 17.1
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 79..102
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 48..71
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 141..164
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 17..40
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 110..133
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 77..107
score: 9.99283
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 108..138
score: 8.558796
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 139..164
score: 9.847349
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 15..45
score: 10.387709
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 1..47
e-value: 7.2E-8
score: 34.0
coord: 103..137
e-value: 1.6E-5
score: 26.5
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 138..164
e-value: 4.0E-5
score: 25.6
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 75..102
e-value: 4.5E-6
score: 28.5
NoneNo IPR availablePANTHERPTHR46179ZINC FINGER PROTEINcoord: 108..164
coord: 2..133
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 138..164
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 87..145
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 8..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_6contigContig_6:849906..850397 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|158700mRNA_2140Tribonema minus UTEX_B_3156 mRNAContig_6 849906..850397 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|158700|e_gw1.6.104.1 ID=Trimin1|158700|e_gw1.6.104.1|Name=jgi.p|Trimin1|158700|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=164bp
MRKHVDAVHLGIKSVPCTHEGCGQSFTTKQMMRKHVDVVHLGIKDVMCSH
NGCIHAFDSKHSMLKHVNAVHLKIKDVPCPHDGCSQMFAQKQHMQKHVKS
LHLGIKDVPCTHEGCKQVFVTKSDMRAHANAVHLSIKDVPCSHDGCSQMF
NAKGNMQKHVREVH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf