Trimin1|158604|e_gw1.6.263.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|158604
Unique NameTrimin1|158604|e_gw1.6.263.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length208
Homology
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BLAST of jgi.p|Trimin1|158604 vs. uniprot
Match: A0A836CAQ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAQ2_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 3.820e-13
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0 
Query:  175 LMNFLLAVILSGCQTVLATCRHCRHLTWMPVNR 207
            LMNFLLAVILSGCQTVLATCRHCRHLTWMPVNR
Sbjct:  175 LMNFLLAVILSGCQTVLATCRHCRHLTWMPVNR 207
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|158604 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CAQ2_9STRA3.820e-13100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 1..190
e-value: 1.8E-46
score: 160.1
NoneNo IPR availablePANTHERPTHR16083:SF25SUBFAMILY NOT NAMEDcoord: 45..189
coord: 2..106
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 2..106
coord: 45..189
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 3..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_6contigContig_6:392220..392843 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|158604mRNA_2078Tribonema minus UTEX_B_3156 mRNAContig_6 392220..392843 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|158604|e_gw1.6.263.1 ID=Trimin1|158604|e_gw1.6.263.1|Name=jgi.p|Trimin1|158604|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=208bp
VGGLSALIKLDLSRCTMLTRLPDSIGGLSTLTVLDLYECEQLTVLPDSVG
QLTALTALDLGWCESLVSLPESLGDLAALTRLRVCGCHALQALPESIGNL
AALTDLDASFCPALETLPNKVGALAALTTLDLSYDGALTDLPNGIANLAA
LTKLDLSSCHNVASLPESIGTMTALMNFLLAVILSGCQTVLATCRHCRHL
TWMPVNR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf