Trimin1|156773|e_gw1.1.16.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|156773
Unique NameTrimin1|156773|e_gw1.1.16.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length102
Homology
BLAST of jgi.p|Trimin1|156773 vs. uniprot
Match: A0A835ZKR4_9STRA (Histone H4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKR4_9STRA)

HSP 1 Score: 197 bits (500), Expect = 8.840e-64
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0
Query:    1 MPNAQAVKQPPAAKRHRKKVVDKMKAARTKPGVRRLCRRGGVKRISGLVYEEARIVYRKFLGDVLKDTATMVEFGKRKTATPMDVVYALKRQGRTLHGFGG 101
            MPNAQAVKQPPAAKRHRKKVVDKMKAARTKPGVRRLCRRGGVKRISGLVYEEARIVYRKFLGDVLKDTATMVEFGKRKTATPMDVVYALKRQGRTLHGFGG
Sbjct:    1 MPNAQAVKQPPAAKRHRKKVVDKMKAARTKPGVRRLCRRGGVKRISGLVYEEARIVYRKFLGDVLKDTATMVEFGKRKTATPMDVVYALKRQGRTLHGFGG 101          
BLAST of jgi.p|Trimin1|156773 vs. uniprot
Match: A0A3B4F7D7_9CICH (Histone H4 n=2 Tax=Percomorphaceae TaxID=1489872 RepID=A0A3B4F7D7_9CICH)

HSP 1 Score: 113 bits (282), Expect = 1.340e-30
Identity = 60/93 (64.52%), Postives = 71/93 (76.34%), Query Frame = 0
Query:    9 QPPAAKRHRKKVVDKMKAARTKPGVRRLCRRGGVKRISGLVYEEARIVYRKFLGDVLKDTATMVEFGKRKTATPMDVVYALKRQGRTLHGFGG 101
            QP +AKRHRK + D ++   TKP +RRL RRGGVKRISGL+YEE R V + FL +V++D  T  E  KRKT T MDVVYALKRQGRTL+GFGG
Sbjct:    6 QPKSAKRHRKVLRDNIQGI-TKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 97          
BLAST of jgi.p|Trimin1|156773 vs. uniprot
Match: A0A7L3HM68_9PASS (Histone H4 (Fragment) n=1 Tax=Buphagus erythrorhynchus TaxID=245048 RepID=A0A7L3HM68_9PASS)

HSP 1 Score: 112 bits (281), Expect = 2.260e-30
Identity = 59/89 (66.29%), Postives = 69/89 (77.53%), Query Frame = 0
Query:   13 AKRHRKKVVDKMKAARTKPGVRRLCRRGGVKRISGLVYEEARIVYRKFLGDVLKDTATMVEFGKRKTATPMDVVYALKRQGRTLHGFGG 101
            AKRHRK + D ++   TKP +RRL RRGGVKRISGL+YEE R V + FL +V++D  T  E  KRKT TPMDVVYALKRQGRTL+GFGG
Sbjct:   16 AKRHRKVLRDNIQGI-TKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTPMDVVYALKRQGRTLYGFGG 103          
BLAST of jgi.p|Trimin1|156773 vs. uniprot
Match: UPI001E272227 (histone H4-like n=1 Tax=Melitaea cinxia TaxID=113334 RepID=UPI001E272227)

HSP 1 Score: 112 bits (281), Expect = 2.260e-30
Identity = 59/89 (66.29%), Postives = 69/89 (77.53%), Query Frame = 0
Query:   13 AKRHRKKVVDKMKAARTKPGVRRLCRRGGVKRISGLVYEEARIVYRKFLGDVLKDTATMVEFGKRKTATPMDVVYALKRQGRTLHGFGG 101
            AKRHRK + D ++   TKP +RRL RRGGVKRISGL+YEE R + R FLG+V++D  T  E  KRKT T MDVVYALKRQGRTL+GFGG
Sbjct:   16 AKRHRKVLRDNIQGI-TKPAIRRLARRGGVKRISGLMYEETRGILRLFLGNVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103          
BLAST of jgi.p|Trimin1|156773 vs. uniprot
Match: A0A672FMS9_SALFA (Histone H4 n=2 Tax=Percomorphaceae TaxID=1489872 RepID=A0A672FMS9_SALFA)

HSP 1 Score: 112 bits (279), Expect = 3.710e-30
Identity = 59/91 (64.84%), Postives = 69/91 (75.82%), Query Frame = 0
Query:   11 PAAKRHRKKVVDKMKAARTKPGVRRLCRRGGVKRISGLVYEEARIVYRKFLGDVLKDTATMVEFGKRKTATPMDVVYALKRQGRTLHGFGG 101
            P AKRHRK + D ++   TKP +RRL RRGGVKRISGL+YEE R V + FL +V++D  T  E  KRKT T MDVVYALKRQGRTL+GFGG
Sbjct:    7 PGAKRHRKVLRDNIQGI-TKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 96          
BLAST of jgi.p|Trimin1|156773 vs. uniprot
Match: UPI001EEC1A37 (histone H4-like n=1 Tax=Daphnia pulicaria TaxID=35523 RepID=UPI001EEC1A37)

HSP 1 Score: 112 bits (279), Expect = 4.550e-30
Identity = 59/89 (66.29%), Postives = 68/89 (76.40%), Query Frame = 0
Query:   13 AKRHRKKVVDKMKAARTKPGVRRLCRRGGVKRISGLVYEEARIVYRKFLGDVLKDTATMVEFGKRKTATPMDVVYALKRQGRTLHGFGG 101
            AKRHRK + D ++   TKP +RRL RRGGVKRISGL+YEE R V + FL +V++D  T  E  KRKT T MDVVYALKRQGRTLHGFGG
Sbjct:   16 AKRHRKVLRDNIQGI-TKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLHGFGG 103          
BLAST of jgi.p|Trimin1|156773 vs. uniprot
Match: A0A8C3RS76_CHESE (Histone H4 n=1 Tax=Chelydra serpentina TaxID=8475 RepID=A0A8C3RS76_CHESE)

HSP 1 Score: 111 bits (278), Expect = 6.460e-30
Identity = 59/89 (66.29%), Postives = 68/89 (76.40%), Query Frame = 0
Query:   13 AKRHRKKVVDKMKAARTKPGVRRLCRRGGVKRISGLVYEEARIVYRKFLGDVLKDTATMVEFGKRKTATPMDVVYALKRQGRTLHGFGG 101
            AKRHRK + D ++   TKP +RRL RRGGVKRISGL+YEE R V + FL DV++D  T  E  KRKT T MDVVYALKRQGRTL+GFGG
Sbjct:   16 AKRHRKVLRDNIQGI-TKPAIRRLARRGGVKRISGLIYEETRGVLKVFLEDVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103          
BLAST of jgi.p|Trimin1|156773 vs. uniprot
Match: P91879_9HYME (Histone H4 n=2 Tax=Endopterygota TaxID=33392 RepID=P91879_9HYME)

HSP 1 Score: 111 bits (277), Expect = 9.170e-30
Identity = 59/89 (66.29%), Postives = 68/89 (76.40%), Query Frame = 0
Query:   13 AKRHRKKVVDKMKAARTKPGVRRLCRRGGVKRISGLVYEEARIVYRKFLGDVLKDTATMVEFGKRKTATPMDVVYALKRQGRTLHGFGG 101
            AKRHRK V D ++   TKP +RRL RRGGVKRISGL+YEE R V + FL +V++D  T  E  KRKT T MDVVYALKRQGRTL+GFGG
Sbjct:   16 AKRHRKAVRDNIQGI-TKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103          
BLAST of jgi.p|Trimin1|156773 vs. uniprot
Match: A0A672L853_SINGR (Histone H4 n=9 Tax=Vertebrata TaxID=7742 RepID=A0A672L853_SINGR)

HSP 1 Score: 110 bits (276), Expect = 9.470e-30
Identity = 59/92 (64.13%), Postives = 69/92 (75.00%), Query Frame = 0
Query:   10 PPAAKRHRKKVVDKMKAARTKPGVRRLCRRGGVKRISGLVYEEARIVYRKFLGDVLKDTATMVEFGKRKTATPMDVVYALKRQGRTLHGFGG 101
            P  AKRHRK + D ++   TKP +RRL RRGGVKRISGL+YEE R V + FL +V++D  T  E  KRKT T MDVVYALKRQGRTL+GFGG
Sbjct:    2 PGGAKRHRKVLRDNIQGI-TKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 92          
BLAST of jgi.p|Trimin1|156773 vs. uniprot
Match: A8JIN9_CHLRE (Histone H4 n=2 Tax=Viridiplantae TaxID=33090 RepID=A8JIN9_CHLRE)

HSP 1 Score: 110 bits (275), Expect = 1.650e-29
Identity = 57/89 (64.04%), Postives = 69/89 (77.53%), Query Frame = 0
Query:   13 AKRHRKKVVDKMKAARTKPGVRRLCRRGGVKRISGLVYEEARIVYRKFLGDVLKDTATMVEFGKRKTATPMDVVYALKRQGRTLHGFGG 101
            AKRHRK + D ++   TKP +RRL RRGGVKRISGL+YEE R V + FL +V++D+ T  E  +RKT T MDVVYALKRQGRTL+GFGG
Sbjct:   12 AKRHRKVLRDNIQGI-TKPAIRRLARRGGVKRISGLIYEETRTVLKTFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 99          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|156773 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZKR4_9STRA8.840e-64100.00Histone H4 n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
A0A3B4F7D7_9CICH1.340e-3064.52Histone H4 n=2 Tax=Percomorphaceae TaxID=1489872 R... [more]
A0A7L3HM68_9PASS2.260e-3066.29Histone H4 (Fragment) n=1 Tax=Buphagus erythrorhyn... [more]
UPI001E2722272.260e-3066.29histone H4-like n=1 Tax=Melitaea cinxia TaxID=1133... [more]
A0A672FMS9_SALFA3.710e-3064.84Histone H4 n=2 Tax=Percomorphaceae TaxID=1489872 R... [more]
UPI001EEC1A374.550e-3066.29histone H4-like n=1 Tax=Daphnia pulicaria TaxID=35... [more]
A0A8C3RS76_CHESE6.460e-3066.29Histone H4 n=1 Tax=Chelydra serpentina TaxID=8475 ... [more]
P91879_9HYME9.170e-3066.29Histone H4 n=2 Tax=Endopterygota TaxID=33392 RepID... [more]
A0A672L853_SINGR9.470e-3064.13Histone H4 n=9 Tax=Vertebrata TaxID=7742 RepID=A0A... [more]
A8JIN9_CHLRE1.650e-2964.04Histone H4 n=2 Tax=Viridiplantae TaxID=33090 RepID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001951Histone H4PRINTSPR00623HISTONEH4coord: 18..37
score: 38.53
coord: 75..87
score: 71.27
coord: 87..98
score: 89.46
coord: 60..74
score: 39.41
coord: 38..58
score: 73.39
IPR001951Histone H4SMARTSM00417h44coord: 27..88
e-value: 4.1E-14
score: 62.9
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 3..101
e-value: 6.0E-31
score: 108.6
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 26..99
NoneNo IPR availablePANTHERPTHR10484:SF185HISTONE H4coord: 12..101
NoneNo IPR availablePANTHERPTHR10484HISTONE H4coord: 12..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_1contigContig_1:45319..45624 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|156773mRNA_910Tribonema minus UTEX_B_3156 mRNAContig_1 45319..45624 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|156773|e_gw1.1.16.1 ID=Trimin1|156773|e_gw1.1.16.1|Name=jgi.p|Trimin1|156773|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=102bp
MPNAQAVKQPPAAKRHRKKVVDKMKAARTKPGVRRLCRRGGVKRISGLVY
EEARIVYRKFLGDVLKDTATMVEFGKRKTATPMDVVYALKRQGRTLHGFG
G*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001951Histone_H4
IPR009072Histone-fold