Trimin1|156088|gw1.3.553.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|156088
Unique NameTrimin1|156088|gw1.3.553.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length60
Homology
BLAST of jgi.p|Trimin1|156088 vs. uniprot
Match: A0A835YYR9_9STRA (Ribosomal protein S16 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYR9_9STRA)

HSP 1 Score: 124 bits (311), Expect = 3.200e-36
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0
Query:    1 LKKLRLKRCGRKKQPFYKIVVMNSSSRRDGYAIEELGFYNPLNKTFKIDKGRTIYRLQQG 60
            LKKLRLKRCGRKKQPFYKIVVMNSSSRRDGYAIEELGFYNPLNKTFKIDKGRTIYRLQQG
Sbjct:    1 LKKLRLKRCGRKKQPFYKIVVMNSSSRRDGYAIEELGFYNPLNKTFKIDKGRTIYRLQQG 60          
BLAST of jgi.p|Trimin1|156088 vs. uniprot
Match: B7T1T4_VAULI (30S ribosomal protein S16, chloroplastic n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T1T4_VAULI)

HSP 1 Score: 114 bits (284), Expect = 7.980e-32
Identity = 53/58 (91.38%), Postives = 58/58 (100.00%), Query Frame = 0
Query:    3 KLRLKRCGRKKQPFYKIVVMNSSSRRDGYAIEELGFYNPLNKTFKIDKGRTIYRLQQG 60
            KLRLKRCGRKKQPFYKIVVMN++SRRDG+AIEELGFYNPLNKTFKI+KGRTIYRL+QG
Sbjct:    3 KLRLKRCGRKKQPFYKIVVMNANSRRDGFAIEELGFYNPLNKTFKINKGRTIYRLKQG 60          
BLAST of jgi.p|Trimin1|156088 vs. uniprot
Match: A0A7S6UA28_9STRA (30S ribosomal protein S16, chloroplastic n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6UA28_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 2.980e-22
Identity = 39/58 (67.24%), Postives = 52/58 (89.66%), Query Frame = 0
Query:    3 KLRLKRCGRKKQPFYKIVVMNSSSRRDGYAIEELGFYNPLNKTFKIDKGRTIYRLQQG 60
            KLRLKRCGRKK+PFY+IVVMN+ ++RDG AIE+LG+YNP+ KTF +++ RT+ RL+QG
Sbjct:    3 KLRLKRCGRKKRPFYRIVVMNNKTKRDGKAIEQLGYYNPITKTFSLNRLRTLERLEQG 60          
BLAST of jgi.p|Trimin1|156088 vs. uniprot
Match: A0A8F0F7A6_9PHAE (Ribosomal protein S16 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F7A6_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 3.910e-22
Identity = 39/58 (67.24%), Postives = 50/58 (86.21%), Query Frame = 0
Query:    3 KLRLKRCGRKKQPFYKIVVMNSSSRRDGYAIEELGFYNPLNKTFKIDKGRTIYRLQQG 60
            K+R KRCGRKKQPFY+IV+M++ ++RDG  +EELGFYNPLNKTF+I++ RTI RL  G
Sbjct:    3 KIRFKRCGRKKQPFYRIVLMDNKTKRDGNVVEELGFYNPLNKTFQINRVRTIIRLDNG 60          
BLAST of jgi.p|Trimin1|156088 vs. uniprot
Match: A0A1I9LW03_9PHAE (30S ribosomal protein S16, chloroplastic n=2 Tax=Chordariaceae TaxID=66220 RepID=A0A1I9LW03_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 1.070e-19
Identity = 38/58 (65.52%), Postives = 49/58 (84.48%), Query Frame = 0
Query:    3 KLRLKRCGRKKQPFYKIVVMNSSSRRDGYAIEELGFYNPLNKTFKIDKGRTIYRLQQG 60
            K+R KR GRKKQPFY+IVVM+  ++RDG A+EELGFY+P+NKTF+I++ RTI RL  G
Sbjct:    3 KIRFKRGGRKKQPFYRIVVMDVKTKRDGKALEELGFYDPMNKTFQINRERTIIRLANG 60          
BLAST of jgi.p|Trimin1|156088 vs. uniprot
Match: A0A8E5XRF9_9PHAE (30S ribosomal protein S16, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRF9_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 2.290e-19
Identity = 38/58 (65.52%), Postives = 50/58 (86.21%), Query Frame = 0
Query:    3 KLRLKRCGRKKQPFYKIVVMNSSSRRDGYAIEELGFYNPLNKTFKIDKGRTIYRLQQG 60
            K+RLKR GRKK+PFY+IV+M++S++RDG AIEELGFYNPLNK F I++ R I R++ G
Sbjct:    3 KIRLKRFGRKKKPFYRIVLMDASTKRDGKAIEELGFYNPLNKIFYINRERIIMRIKTG 60          
BLAST of jgi.p|Trimin1|156088 vs. uniprot
Match: A0A8F0FAS3_9PHAE (Ribosomal protein S16 n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAS3_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 3.080e-19
Identity = 37/58 (63.79%), Postives = 46/58 (79.31%), Query Frame = 0
Query:    3 KLRLKRCGRKKQPFYKIVVMNSSSRRDGYAIEELGFYNPLNKTFKIDKGRTIYRLQQG 60
            K+R K CGRKKQPFY+IVVM+  ++RDG  +EELGFYNP+NKT  I++ RTI RL  G
Sbjct:    3 KIRFKLCGRKKQPFYRIVVMDVRTKRDGKVLEELGFYNPMNKTLHINRERTISRLNHG 60          
BLAST of jgi.p|Trimin1|156088 vs. uniprot
Match: A0A141BSI6_9PHAE (30S ribosomal protein S16, chloroplastic n=16 Tax=Fucales TaxID=3009 RepID=A0A141BSI6_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 1.780e-18
Identity = 38/58 (65.52%), Postives = 46/58 (79.31%), Query Frame = 0
Query:    3 KLRLKRCGRKKQPFYKIVVMNSSSRRDGYAIEELGFYNPLNKTFKIDKGRTIYRLQQG 60
            K+R KR GRKKQPFYKIVVM+  ++RDG A+EELGFYNP+ KT  I+  RTI RL+ G
Sbjct:    3 KIRFKRTGRKKQPFYKIVVMDVRTKRDGKALEELGFYNPITKTLNINCERTISRLKNG 60          
BLAST of jgi.p|Trimin1|156088 vs. uniprot
Match: A0A410D2P4_9STRA (Ribosomal protein S16 n=1 Tax=Pseudellipsoidion edaphicum TaxID=1431838 RepID=A0A410D2P4_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 3.790e-18
Identity = 37/58 (63.79%), Postives = 45/58 (77.59%), Query Frame = 0
Query:    3 KLRLKRCGRKKQPFYKIVVMNSSSRRDGYAIEELGFYNPLNKTFKIDKGRTIYRLQQG 60
            K+RLKRCGRKK P Y+IV++ S SRRDG AIEELGFYNPL+     +K R ++RL QG
Sbjct:    3 KIRLKRCGRKKSPSYRIVLVPSQSRRDGRAIEELGFYNPLSNQLVYNKERIVFRLNQG 60          
BLAST of jgi.p|Trimin1|156088 vs. uniprot
Match: A0A6F8SGL4_NEODN (30S ribosomal protein S16, chloroplastic n=1 Tax=Neoporphyra dentata TaxID=76160 RepID=A0A6F8SGL4_NEODN)

HSP 1 Score: 79.0 bits (193), Expect = 5.830e-18
Identity = 37/58 (63.79%), Postives = 46/58 (79.31%), Query Frame = 0
Query:    3 KLRLKRCGRKKQPFYKIVVMNSSSRRDGYAIEELGFYNPLNKTFKIDKGRTIYRLQQG 60
            KLRLKR GRKKQP Y+IVVM+S ++RDG AIEELGFYNP+N   ++D  + + RL QG
Sbjct:    3 KLRLKRYGRKKQPSYRIVVMDSRNKRDGKAIEELGFYNPINNETRVDISKVLQRLAQG 60          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|156088 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YYR9_9STRA3.200e-36100.00Ribosomal protein S16 domain-containing protein (F... [more]
B7T1T4_VAULI7.980e-3291.3830S ribosomal protein S16, chloroplastic n=1 Tax=V... [more]
A0A7S6UA28_9STRA2.980e-2267.2430S ribosomal protein S16, chloroplastic n=1 Tax=S... [more]
A0A8F0F7A6_9PHAE3.910e-2267.24Ribosomal protein S16 n=1 Tax=Protohalopteris sp. ... [more]
A0A1I9LW03_9PHAE1.070e-1965.5230S ribosomal protein S16, chloroplastic n=2 Tax=C... [more]
A0A8E5XRF9_9PHAE2.290e-1965.5230S ribosomal protein S16, chloroplastic n=1 Tax=I... [more]
A0A8F0FAS3_9PHAE3.080e-1963.79Ribosomal protein S16 n=1 Tax=Desmarestia aculeata... [more]
A0A141BSI6_9PHAE1.780e-1865.5230S ribosomal protein S16, chloroplastic n=16 Tax=... [more]
A0A410D2P4_9STRA3.790e-1863.79Ribosomal protein S16 n=1 Tax=Pseudellipsoidion ed... [more]
A0A6F8SGL4_NEODN5.830e-1863.7930S ribosomal protein S16, chloroplastic n=1 Tax=N... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000307Ribosomal protein S16PFAMPF00886Ribosomal_S16coord: 8..60
e-value: 1.4E-17
score: 63.4
IPR000307Ribosomal protein S16TIGRFAMTIGR00002TIGR00002coord: 3..60
e-value: 3.5E-23
score: 79.4
IPR000307Ribosomal protein S16PANTHERPTHR1291930S RIBOSOMAL PROTEIN S16coord: 3..60
IPR023803Ribosomal protein S16 domain superfamilyGENE3D3.30.1320.10coord: 1..60
e-value: 3.5E-20
score: 74.0
IPR023803Ribosomal protein S16 domain superfamilySUPERFAMILY54565Ribosomal protein S16coord: 3..60
NoneNo IPR availablePANTHERPTHR12919:SF3830S RIBOSOMAL PROTEIN S16, CHLOROPLASTICcoord: 3..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_3contigContig_3:1862034..1862213 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|156088mRNA_491Tribonema minus UTEX_B_3156 mRNAContig_3 1862034..1862213 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|156088|gw1.3.553.1 ID=Trimin1|156088|gw1.3.553.1|Name=jgi.p|Trimin1|156088|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=60bp
LKKLRLKRCGRKKQPFYKIVVMNSSSRRDGYAIEELGFYNPLNKTFKIDK
GRTIYRLQQG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000307Ribosomal_S16
IPR023803Ribosomal_S16_dom_sf