Trimin1|152047|gw1.32.181.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|152047
Unique NameTrimin1|152047|gw1.32.181.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length77
Homology
BLAST of jgi.p|Trimin1|152047 vs. uniprot
Match: A0A836CDE2_9STRA (GRAM domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDE2_9STRA)

HSP 1 Score: 160 bits (406), Expect = 3.310e-50
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0
Query:    1 QDFSCAVQSRVLMHGRLYITPGHLLFYSNIFGFEKIIRIPFTHVRGVARASTALFIPNAIAITTSRRAYVFRSFWDR 77
            QDFSCAVQSRVLMHGRLYITPGHLLFYSNIFGFEKIIRIPFTHVRGVARASTALFIPNAIAITTSRRAYVFRSFWDR
Sbjct:    1 QDFSCAVQSRVLMHGRLYITPGHLLFYSNIFGFEKIIRIPFTHVRGVARASTALFIPNAIAITTSRRAYVFRSFWDR 77          
BLAST of jgi.p|Trimin1|152047 vs. uniprot
Match: F0Y4G3_AURAN (GRAM domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4G3_AURAN)

HSP 1 Score: 111 bits (278), Expect = 1.370e-30
Identity = 45/77 (58.44%), Postives = 64/77 (83.12%), Query Frame = 0
Query:    1 QDFSCAVQSRVLMHGRLYITPGHLLFYSNIFGFEKIIRIPFTHVRGVARASTALFIPNAIAITTSRRAYVFRSFWDR 77
            +DFSCA++ ++L+HGRLY+T   + FYSN+FGFEK I+IP++H+  + +  TA+FIPNAIA+ T+R+ YVFRSFWDR
Sbjct:    1 RDFSCAIERKILLHGRLYVTERFICFYSNLFGFEKKIKIPYSHITCITKEYTAVFIPNAIAVITARKEYVFRSFWDR 77          
BLAST of jgi.p|Trimin1|152047 vs. uniprot
Match: D7FKF6_ECTSI (VASt domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKF6_ECTSI)

HSP 1 Score: 120 bits (301), Expect = 5.270e-30
Identity = 51/77 (66.23%), Postives = 66/77 (85.71%), Query Frame = 0
Query:    1 QDFSCAVQSRVLMHGRLYITPGHLLFYSNIFGFEKIIRIPFTHVRGVARASTALFIPNAIAITTSRRAYVFRSFWDR 77
            +DFSCAV+SR+L+HGR+Y+T   + FYSN+FGFEKII+IPF H+R + +  TALFIPNAIAI TS++ Y+FRSFWDR
Sbjct:   35 EDFSCAVESRILLHGRMYVTNTFVCFYSNLFGFEKIIKIPFCHMRCITKEKTALFIPNAIAIITSKKEYIFRSFWDR 111          
BLAST of jgi.p|Trimin1|152047 vs. uniprot
Match: A0A6H5L0Q2_9PHAE (VASt domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Q2_9PHAE)

HSP 1 Score: 120 bits (301), Expect = 5.340e-30
Identity = 51/77 (66.23%), Postives = 66/77 (85.71%), Query Frame = 0
Query:    1 QDFSCAVQSRVLMHGRLYITPGHLLFYSNIFGFEKIIRIPFTHVRGVARASTALFIPNAIAITTSRRAYVFRSFWDR 77
            +DFSCAV+SR+L+HGR+Y+T   + FYSN+FGFEKII+IPF H+R + +  TALFIPNAIAI TS++ Y+FRSFWDR
Sbjct:   74 EDFSCAVESRILLHGRMYVTNTFVCFYSNLFGFEKIIKIPFCHMRCITKEKTALFIPNAIAIITSKKEYIFRSFWDR 150          
BLAST of jgi.p|Trimin1|152047 vs. uniprot
Match: A0A8J2ST97_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2ST97_9STRA)

HSP 1 Score: 113 bits (283), Expect = 6.260e-28
Identity = 47/77 (61.04%), Postives = 65/77 (84.42%), Query Frame = 0
Query:    1 QDFSCAVQSRVLMHGRLYITPGHLLFYSNIFGFEKIIRIPFTHVRGVARASTALFIPNAIAITTSRRAYVFRSFWDR 77
            +DFSCA++ ++L+HGRLY+T   + FYSN+FGFEK I+IP++HV  V + +TA+FIPNAIA+ T+R+ YVFRSFWDR
Sbjct:   62 RDFSCAIERKILLHGRLYVTERFICFYSNLFGFEKKIKIPYSHVTCVTKENTAVFIPNAIAVITARKEYVFRSFWDR 138          
BLAST of jgi.p|Trimin1|152047 vs. uniprot
Match: A0A7S2STC3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STC3_9STRA)

HSP 1 Score: 109 bits (273), Expect = 2.180e-26
Identity = 45/77 (58.44%), Postives = 63/77 (81.82%), Query Frame = 0
Query:    1 QDFSCAVQSRVLMHGRLYITPGHLLFYSNIFGFEKIIRIPFTHVRGVARASTALFIPNAIAITTSRRAYVFRSFWDR 77
            +DFSCAV+ ++L+HGR+Y+T   + FYSN+FGFEK I+IP++H+  V +  TA+FIPNAIA+ T++R Y FRSFWDR
Sbjct:   43 KDFSCAVERKILLHGRMYVTDKFICFYSNLFGFEKKIKIPYSHIACVTKEYTAVFIPNAIAVITAKREYFFRSFWDR 119          
BLAST of jgi.p|Trimin1|152047 vs. uniprot
Match: A0A7S3NLX8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NLX8_9STRA)

HSP 1 Score: 108 bits (271), Expect = 5.910e-26
Identity = 43/77 (55.84%), Postives = 64/77 (83.12%), Query Frame = 0
Query:    1 QDFSCAVQSRVLMHGRLYITPGHLLFYSNIFGFEKIIRIPFTHVRGVARASTALFIPNAIAITTSRRAYVFRSFWDR 77
            +DFSCA++ ++L+HGRLY+T   + FYSN+FGFEK I+IP++++  + +  TA+FIPNAIA+ T+R+ Y+FRSFWDR
Sbjct:  166 RDFSCAIERKILLHGRLYVTERFICFYSNLFGFEKKIKIPYSYITCITKEYTAVFIPNAIAVITARKEYIFRSFWDR 242          
BLAST of jgi.p|Trimin1|152047 vs. uniprot
Match: W7TDU9_9STRA (Gram domain-containing protein 1a n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TDU9_9STRA)

HSP 1 Score: 101 bits (252), Expect = 1.100e-23
Identity = 45/76 (59.21%), Postives = 58/76 (76.32%), Query Frame = 0
Query:    2 DFSCAVQSRVLMHGRLYITPGHLLFYSNIFGFEKIIRIPFTHVRGVARASTALFIPNAIAITTSRRAYVFRSFWDR 77
            D SCAV+S++L+HGR+YIT   + FYSN FGFEK I+IPF+ VR +++ +TAL IPN I I T  + Y FRSFWDR
Sbjct:  119 DASCAVESKILLHGRIYITDKFVCFYSNFFGFEKKIKIPFSQVRTLSKGNTALLIPNCIIIQTHGKEYCFRSFWDR 194          
BLAST of jgi.p|Trimin1|152047 vs. uniprot
Match: A0A482S830_9ARCH (GRAM domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S830_9ARCH)

HSP 1 Score: 88.2 bits (217), Expect = 1.810e-21
Identity = 37/63 (58.73%), Postives = 52/63 (82.54%), Query Frame = 0
Query:    2 DFSCAVQSRVLMHGRLYITPGHLLFYSNIFGFEKIIRIPFTHVRGVARASTALFIPNAIAITT 64
            DFSCAV+S VL+HGR+YI+   + FYSN+FG EK IRIP++H++ + + +TA+ IPNAIAI+T
Sbjct:    6 DFSCAVESTVLLHGRMYISTRFICFYSNLFGLEKKIRIPYSHIKNITKENTAMVIPNAIAIST 68          
BLAST of jgi.p|Trimin1|152047 vs. uniprot
Match: A0A7S1U683_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U683_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.610e-19
Identity = 32/76 (42.11%), Postives = 56/76 (73.68%), Query Frame = 0
Query:    2 DFSCAVQSRVLMHGRLYITPGHLLFYSNIFGFEKIIRIPFTHVRGVARASTALFIPNAIAITTSRRAYVFRSFWDR 77
            DFSC+V+S++ +HG +Y+T   + FYSN FG+EK I +P+  +  +++ S ++F+   + I+T+++ YVFR+FWDR
Sbjct:   43 DFSCSVESKMTLHGHMYVTTRFICFYSNFFGYEKKILLPYKTINCISKTSDSVFLSPGVEISTAKQGYVFRNFWDR 118          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|152047 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CDE2_9STRA3.310e-50100.00GRAM domain-containing protein (Fragment) n=1 Tax=... [more]
F0Y4G3_AURAN1.370e-3058.44GRAM domain-containing protein (Fragment) n=1 Tax=... [more]
D7FKF6_ECTSI5.270e-3066.23VASt domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5L0Q2_9PHAE5.340e-3066.23VASt domain-containing protein (Fragment) n=1 Tax=... [more]
A0A8J2ST97_9STRA6.260e-2861.04Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2STC3_9STRA2.180e-2658.44Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3NLX8_9STRA5.910e-2655.84Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
W7TDU9_9STRA1.100e-2359.21Gram domain-containing protein 1a n=1 Tax=Nannochl... [more]
A0A482S830_9ARCH1.810e-2158.73GRAM domain-containing protein n=1 Tax=archaeon Ta... [more]
A0A7S1U683_9STRA1.610e-1942.11Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 1..77
e-value: 4.2E-21
score: 76.8
IPR004182GRAM domainPFAMPF02893GRAMcoord: 2..76
e-value: 8.3E-11
score: 41.8
NoneNo IPR availablePANTHERPTHR23319UNCHARACTERIZEDcoord: 2..77
IPR040147Membrane-anchored lipid-binding protein Ysp2/Lam4-likePANTHERPTHR23319:SF4AT22714Pcoord: 2..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_32contigContig_32:22709..23688 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|152047mRNA_5156Tribonema minus UTEX_B_3156 mRNAContig_32 22709..23688 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|152047|gw1.32.181.1 ID=Trimin1|152047|gw1.32.181.1|Name=jgi.p|Trimin1|152047|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=77bp
QDFSCAVQSRVLMHGRLYITPGHLLFYSNIFGFEKIIRIPFTHVRGVARA
STALFIPNAIAITTSRRAYVFRSFWDR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011993PH-like_dom_sf
IPR004182GRAM
IPR040147Ysp2/Lam4-like