Trimin1|151488|gw1.6.288.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|151488
Unique NameTrimin1|151488|gw1.6.288.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length221
Homology
BLAST of jgi.p|Trimin1|151488 vs. uniprot
Match: A0A836CB37_9STRA (FA_FANCE domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB37_9STRA)

HSP 1 Score: 375 bits (962), Expect = 2.430e-130
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0
Query:    1 AVCTKAVTPALGLRACTEFVRGALLPRAAALSAPAPRTLVSGVTAAAKQRPQAVVEGLLVPLLHGDAAAGDGSAXXXXXXXXXXXXXXSGGRMAPGSAQCELLLRTARSALPPHAAAPLVAAACDPRCAWNDGTVALVTSLLGMKLVLDDSAVAALAGRIEAEAERAEQCKSLKFATLLHTLVLKYGPQAGPHAAVLRTAAEKNTTFMKKSALSALQRLKS 221
            AVCTKAVTPALGLRACTEFVRGALLPRAAALSAPAPRTLVSGVTAAAKQRPQAVVEGLLVPLLHGDAAAGDGSAXXXXXXXXXXXXXXSGGRMAPGSAQCELLLRTARSALPPHAAAPLVAAACDPRCAWNDGTVALVTSLLGMKLVLDDSAVAALAGRIEAEAERAEQCKSLKFATLLHTLVLKYGPQAGPHAAVLRTAAEKNTTFMKKSALSALQRLKS
Sbjct:    1 AVCTKAVTPALGLRACTEFVRGALLPRAAALSAPAPRTLVSGVTAAAKQRPQAVVEGLLVPLLHGDAAAGDGSAXXXXXXXXXXXXXXSGGRMAPGSAQCELLLRTARSALPPHAAAPLVAAACDPRCAWNDGTVALVTSLLGMKLVLDDSAVAALAGRIEAEAERAEQCKSLKFATLLHTLVLKYGPQAGPHAAVLRTAAEKNTTFMKKSALSALQRLKS 221          
BLAST of jgi.p|Trimin1|151488 vs. uniprot
Match: D7FQ65_ECTSI (FA_FANCE domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ65_ECTSI)

HSP 1 Score: 132 bits (333), Expect = 9.400e-35
Identity = 102/236 (43.22%), Postives = 128/236 (54.24%), Query Frame = 0
Query:    1 AVCTKAVTPALGLRACTEFVRGALLPRAAALSAPAPRTLVSGVTAAAKQRPQAVVEGLLVPLL-HGDAAAGDGSAXXXXXXXXXXXXXXSGGRMAP-----GSAQCELLLRTARSALPP---------HAAAPLV--AAACDPRCAWNDGTVALVTSLLGMKLVLDDSAVAALAGRIEAEAERAEQCKSLKFATLLHTLVLKYGPQAGPHAAVLRTAAEKNTTFMKKSALSALQRL 219
            A+C   VTPAL LR C  FVR  L+PRA AL+APA R LV+ V+   K RP  V++GL++PLL  GD A+  GSA                   A      G A+ E           P         +AAA     AA    RC W + TV ++T+ L +K  L D A+AAL   +EA AERA   KSLKF TL+H+LV +YGPQ  PH  VLRTA  + +TFM K+ L+ALQRL
Sbjct:    2 AICDGFVTPALSLRNCLAFVRAVLVPRARALNAPASRLLVTAVSGIGKARPGVVIDGLVLPLLCGGDPASAVGSAQCELCTRLIKQILPKDTLEAVLVGLCGPAEDESAQTAGGWIEGPSGGSGGNGTNAAAGRRHDAAGSSSRCVWTELTVPVMTTALNLKPALSDRAIAALVRGVEAAAERAALQKSLKFTTLIHSLVTRYGPQLKPHVPVLRTAVGRCSTFMVKAVLAALQRL 237          
BLAST of jgi.p|Trimin1|151488 vs. uniprot
Match: A0A6H5KA87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA87_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 1.830e-21
Identity = 54/101 (53.47%), Postives = 68/101 (67.33%), Query Frame = 0
Query:  119 LVAAACDPRCAWNDGTVALVTSLLGMKLVLDDSAVAALAGRIEAEAERAEQCKSLKFATLLHTLVLKYGPQAGPHAAVLRTAAEKNTTFMKKSALSALQRL 219
            L AA    RC W + TV ++T+ L +K  L D A+AAL   +EA AERA   KSLKF TL+H+LV +YGPQ  PH  VLRTA  + +TFM K+ L+ALQRL
Sbjct:   62 LYAAGSSLRCVWTELTVPVMTTALNLKPALSDRAIAALVRGVEAAAERAALQKSLKFTTLIHSLVTRYGPQLKPHVPVLRTAVGRCSTFMVKAVLAALQRL 162          
BLAST of jgi.p|Trimin1|151488 vs. uniprot
Match: A0A7R9Z4A9_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z4A9_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 1.160e-7
Identity = 67/224 (29.91%), Postives = 104/224 (46.43%), Query Frame = 0
Query:   17 TEFVRGALLPRAAAL--SAPAPRTLVSGVTAAAKQRPQAVVEGLLVPLLHGDAAAGDGSAXXXXXXXXXXXXXXSGGRMAPGSAQCELLLRTARSALPPHAAAPLVAA-AC-DP--------------RCAWNDGTVALVTSLLGMKLVLDDSAVAALAGRIEAEAERAEQCKSLKFATLLHTLVLKYGPQAGPHAAV--LRTAAEKNTTFMKKSALSALQRLK 220
            T ++R  +LP  + L  S PA RTL+S  +  A++RP   V+ LL+P L        GS+              +GG   P  A C+L+ R  + A      A L+    C DP              +  W D ++ ++TS +  +  L D+ ++ L+ +++         KS+KF+TL H LV KYG Q    + V  L  +AE   TFM K+  S L++LK
Sbjct:  259 TAYLRSFVLPLLSNLNGSKPASRTLISTTSWLARERPSETVKALLIPSLCVPIDVRKGSS--------------NGG---PNKALCDLVGRVVKGAKEKEPIAELLTGLVCGDPAGVKIISGGSCSSDKMVWTDESIPIMTSCINKRATLPDATISELSRQVQLLVPNMR--KSMKFSTLFHALVTKYGNQLRKLSMVGDLTQSAEMLETFMGKTITSVLRKLK 463          
BLAST of jgi.p|Trimin1|151488 vs. uniprot
Match: A0A8K1FLS5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FLS5_PYTOL)

HSP 1 Score: 59.3 bits (142), Expect = 9.690e-7
Identity = 67/209 (32.06%), Postives = 95/209 (45.45%), Query Frame = 0
Query:   18 EFVRGALLPRAAALSAPAPRTLVSGVTAAAKQRPQ-AVVEGLLVPLLHGDAAAGDGSAXXXXXXXXXXXXXXSGGRMAPGSAQCELLLRTARSALPPHAAAPLVAAACDPRCAWNDGTVALVTSLLGMKLVLD----DSAVAALAGRIEAEAERAEQCKSLKFATLLHTLVLKYGPQAGPHAAVLRTAAEKNTTFMKKSALSALQRLKS 221
             F++ ALLPR  A ++   R L+  V   AK   Q A+++GL+VP+L   + +G  SA              +       + Q + L+  + S                     N+  V +  S+L +K  L     +  +  L G +E EAE     KS KFATLL TLV KYG Q   HA  L   A K T+ M K+AL A+Q+LKS
Sbjct:  299 SFLQAALLPRVLAATSVISRVLLQTVLLYAKPSYQTALIDGLIVPVL---STSGISSAQGEALTRILREKGVA-------AEQLDTLVNQSLSQ--------------STSILANEAVVLVFQSVLNLKPSLSAATIERLITVLNGSVENEAEI---LKSAKFATLLFTLVSKYGEQCAAHADDLEAVATKLTSVMAKAALRAIQKLKS 480          
BLAST of jgi.p|Trimin1|151488 vs. uniprot
Match: A0A329T1M1_9STRA (FA_FANCE domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329T1M1_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 2.670e-5
Identity = 39/99 (39.39%), Postives = 53/99 (53.54%), Query Frame = 0
Query:  125 DPRCAWNDGTVALVTSLLGMKLVLDDSAVAALAGRIEAEAER--AEQCK-SLKFATLLHTLVLKYGPQAGPHAAVLRTAAEKNTTFMKKSALSALQRLK 220
            DP    N+  + +  ++L  K VL    V  L G  EA  ER  AEQ + SLKFAT++ TL+ KY  Q   H   L   A + T+ M K+ L +LQ+LK
Sbjct:  411 DPHLLSNESALLVFQNILNTKPVLSALTVERLVGACEAVLERPEAEQVRGSLKFATVIFTLISKYPQQCAGHVETLEAIATQLTSIMAKTTLRSLQKLK 509          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|151488 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A836CB37_9STRA2.430e-130100.00FA_FANCE domain-containing protein (Fragment) n=1 ... [more]
D7FQ65_ECTSI9.400e-3543.22FA_FANCE domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KA87_9PHAE1.830e-2153.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7R9Z4A9_9STRA1.160e-729.91Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A8K1FLS5_PYTOL9.690e-732.06Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A329T1M1_9STRA2.670e-539.39FA_FANCE domain-containing protein n=2 Tax=Phytoph... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.25.40.480coord: 1..220
e-value: 1.5E-51
score: 177.2
IPR021025Fanconi Anaemia group E protein, C-terminalPFAMPF11510FA_FANCEcoord: 96..219
e-value: 5.1E-11
score: 42.4
IPR039685Fanconi anemia group E proteinPANTHERPTHR32094FANCONI ANEMIA GROUP E PROTEINcoord: 8..64
coord: 94..221

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_6contigContig_6:446706..447368 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|151488mRNA_2090Tribonema minus UTEX_B_3156 mRNAContig_6 446706..447368 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|151488|gw1.6.288.1 ID=Trimin1|151488|gw1.6.288.1|Name=jgi.p|Trimin1|151488|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=221bp
AVCTKAVTPALGLRACTEFVRGALLPRAAALSAPAPRTLVSGVTAAAKQR
PQAVVEGLLVPLLHGDAAAGDGSAAAAGDSGAGVGDSSSGGRMAPGSAQC
ELLLRTARSALPPHAAAPLVAAACDPRCAWNDGTVALVTSLLGMKLVLDD
SAVAALAGRIEAEAERAEQCKSLKFATLLHTLVLKYGPQAGPHAAVLRTA
AEKNTTFMKKSALSALQRLKS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021025Fanconi_anaemia_gr_E_prot_C
IPR039685FANCE