Trimin1|149626|gw1.204.34.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|149626
Unique NameTrimin1|149626|gw1.204.34.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length101
Homology
BLAST of jgi.p|Trimin1|149626 vs. uniprot
Match: A0A836CGP6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGP6_9STRA)

HSP 1 Score: 185 bits (469), Expect = 4.550e-59
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0
Query:    1 LARENAELLEQLKSELDGARQVEVKMAEISGLMSLFATRVAEQQEEMEAIYGAAMDAHDSLRRGGAHLGKAQQRGLAARKYYVAFMTVMTLLLLFLHLIAP 101
            LARENAELLEQLKSELDGARQVEVKMAEISGLMSLFATRVAEQQEEMEAIYGAAMDAHDSLRRGGAHLGKAQQRGLAARKYYVAFMTVMTLLLLFLHLIAP
Sbjct:    1 LARENAELLEQLKSELDGARQVEVKMAEISGLMSLFATRVAEQQEEMEAIYGAAMDAHDSLRRGGAHLGKAQQRGLAARKYYVAFMTVMTLLLLFLHLIAP 101          
BLAST of jgi.p|Trimin1|149626 vs. uniprot
Match: A0A7S3Y6Y2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6Y2_HETAK)

HSP 1 Score: 76.3 bits (186), Expect = 2.820e-14
Identity = 45/101 (44.55%), Postives = 63/101 (62.38%), Query Frame = 0
Query:    1 LARENAELLEQLKSELDGARQVEVKMAEISGLMSLFATRVAEQQEEMEAIYGAAMDAHDSLRRGGAHLGKAQQRGLAARKYYVAFMTVMTLLLLFLHLIAP 101
            L  EN  LL  L++ELD  +Q+E KMAEIS LMSLF+T+V EQQ E+E +   A  A  ++ +G  ++ KA +     RK YV F+  ++ +LLFLH   P
Sbjct:  231 LQEENHNLLADLQNELDSVKQIESKMAEISTLMSLFSTKVMEQQTEIEQLGTLAQKASTNIEQGNKYIDKASEIQGGFRKIYVTFIMTLSFILLFLHWYMP 331          
BLAST of jgi.p|Trimin1|149626 vs. uniprot
Match: A0A1J3H3J4_NOCCA (Syntaxin-81 n=2 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3H3J4_NOCCA)

HSP 1 Score: 60.1 bits (144), Expect = 1.840e-8
Identity = 34/86 (39.53%), Postives = 54/86 (62.79%), Query Frame = 0
Query:   11 QLKSELDGARQVEVKMAEISGLMSLFATRVAEQQEEMEAIYGAAMDAHDSLRRGGAHLGKAQQRGLAARKYYVAFMTVMTLLLLFL 96
            +L + LDGARQ+E K+ E+S L  L AT V +Q +++E IY  A++A +++  G   L +A QR   +R + + F  V+T  +LFL
Sbjct:  220 ELSNLLDGARQIETKIVEMSALNHLMATHVLQQAQQIEVIYYQALEATNNVELGNRELAQAIQRNRGSRTFLMLFFFVLTFSVLFL 305          
BLAST of jgi.p|Trimin1|149626 vs. uniprot
Match: A0A5N6PRH6_9ASTR (Syntaxin-18_N domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6PRH6_9ASTR)

HSP 1 Score: 59.7 bits (143), Expect = 2.840e-8
Identity = 34/86 (39.53%), Postives = 54/86 (62.79%), Query Frame = 0
Query:   11 QLKSELDGARQVEVKMAEISGLMSLFATRVAEQQEEMEAIYGAAMDAHDSLRRGGAHLGKAQQRGLAARKYYVAFMTVMTLLLLFL 96
            +L S LDGAR  E KM E+S L  L +T V +Q +++E +Y  A++A  ++  G   L +A QR  ++R + + F+ V+TL +LFL
Sbjct:  203 ELSSLLDGARDTETKMVEMSALNHLMSTHVLQQAQQIEYLYDQAVEATKNVEMGNKELTQAIQRNSSSRTFLLLFLVVLTLSVLFL 288          
BLAST of jgi.p|Trimin1|149626 vs. uniprot
Match: V4MG35_EUTSA (Syntaxin-18_N domain-containing protein n=2 Tax=Eutrema salsugineum TaxID=72664 RepID=V4MG35_EUTSA)

HSP 1 Score: 59.3 bits (142), Expect = 4.030e-8
Identity = 34/86 (39.53%), Postives = 53/86 (61.63%), Query Frame = 0
Query:   11 QLKSELDGARQVEVKMAEISGLMSLFATRVAEQQEEMEAIYGAAMDAHDSLRRGGAHLGKAQQRGLAARKYYVAFMTVMTLLLLFL 96
            +L + LDGARQ E KM E+S L  L AT V +Q +++E +Y  A++A  ++  G   L +A QR  ++R + + F  V+T  +LFL
Sbjct:  313 ELSNLLDGARQTETKMVEMSALNHLMATHVLQQAQQIEFLYDQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFFIVLTFSVLFL 398          
BLAST of jgi.p|Trimin1|149626 vs. uniprot
Match: SYP81_ARATH (Syntaxin-81 n=16 Tax=Brassicaceae TaxID=3700 RepID=SYP81_ARATH)

HSP 1 Score: 58.9 bits (141), Expect = 4.790e-8
Identity = 34/86 (39.53%), Postives = 53/86 (61.63%), Query Frame = 0
Query:   11 QLKSELDGARQVEVKMAEISGLMSLFATRVAEQQEEMEAIYGAAMDAHDSLRRGGAHLGKAQQRGLAARKYYVAFMTVMTLLLLFL 96
            +L + LDGARQ E KM E+S L  L AT V +Q +++E +Y  A++A  ++  G   L +A QR  ++R + + F  V+T  +LFL
Sbjct:  221 ELSNLLDGARQTETKMVEMSALNHLMATHVLQQAQQIEFLYDQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFFFVLTFSVLFL 306          
BLAST of jgi.p|Trimin1|149626 vs. uniprot
Match: UPI0006A6FB1B (LOW QUALITY PROTEIN: syntaxin-81 n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=UPI0006A6FB1B)

HSP 1 Score: 52.0 bits (123), Expect = 1.240e-5
Identity = 32/86 (37.21%), Postives = 52/86 (60.47%), Query Frame = 0
Query:   11 QLKSELDGARQVEVKMAEISGLMSLFATRVAEQQEEMEAIYGAAMDAHDSLRRGGAHLGKAQQRGLAARKYYVAFMTVMTLLLLFL 96
            +L + LDGARQ E KM E+S L  L AT V +Q +++E +Y  A++A  ++      L +A +R  ++R + + F  V+T  +LFL
Sbjct:  178 ELSNLLDGARQTETKMVEMSALNHLMATHVLQQAQQIEFLYDQAVEATKNV-----ELSQAIRRNSSSRNFLLLFCFVLTFSVLFL 258          
BLAST of jgi.p|Trimin1|149626 vs. uniprot
Match: A0A565BGT8_9BRAS (PWWP domain-containing protein n=1 Tax=Arabis nemorensis TaxID=586526 RepID=A0A565BGT8_9BRAS)

HSP 1 Score: 52.0 bits (123), Expect = 1.630e-5
Identity = 28/71 (39.44%), Postives = 44/71 (61.97%), Query Frame = 0
Query:   11 QLKSELDGARQVEVKMAEISGLMSLFATRVAEQQEEMEAIYGAAMDAHDSLRRGGAHLGKAQQRGLAARKY 81
            +L + LDGARQ E KM E+S L  L AT V +Q +++E +Y  A++A  ++  G   L +A QR  ++R +
Sbjct:  220 ELSNLLDGARQTETKMVEMSALNHLMATHVLQQAQQIEFLYDQAVEATKNVELGNKELSQAIQRNSSSRTF 290          
BLAST of jgi.p|Trimin1|149626 vs. uniprot
Match: A0A0D3CRK1_BRAOL (PWWP domain-containing protein n=4 Tax=Brassica TaxID=3705 RepID=A0A0D3CRK1_BRAOL)

HSP 1 Score: 52.0 bits (123), Expect = 1.640e-5
Identity = 32/86 (37.21%), Postives = 52/86 (60.47%), Query Frame = 0
Query:   11 QLKSELDGARQVEVKMAEISGLMSLFATRVAEQQEEMEAIYGAAMDAHDSLRRGGAHLGKAQQRGLAARKYYVAFMTVMTLLLLFL 96
            +L + LDGARQ E KM E+S L  L AT V +Q +++E +Y  A++A  ++      L +A +R  ++R + + F  V+T  +LFL
Sbjct:  514 ELSNLLDGARQTETKMVEMSALNHLMATHVLQQAQQIEFLYDQAVEATKNV-----ELSQAIRRNSSSRNFLLLFCFVLTFSVLFL 594          
BLAST of jgi.p|Trimin1|149626 vs. uniprot
Match: A0A7S2G2T6_9DINO (Hypothetical protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2G2T6_9DINO)

HSP 1 Score: 48.1 bits (113), Expect = 8.540e-5
Identity = 27/87 (31.03%), Postives = 51/87 (58.62%), Query Frame = 0
Query:    8 LLEQLKSELDGARQVEVKMAEISGLMSLFATRVAEQQEEMEAIYGAAMDAHDSLRRGGAHLGKAQQRGLAARKYYVAFMTVMTLLLL 94
            LL   +++LD   + + K+ E++ L+SLF+T+V EQQE+++ I+  A ++ + +   G HL +A +   + R + V +     L LL
Sbjct:   28 LLAAYETDLDKIVETQAKLGEVANLVSLFSTKVVEQQEQVDNIHELAEESTEIIENAGKHLDRAVENRSSYRAWLVCWFVGSALFLL 114          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|149626 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A836CGP6_9STRA4.550e-59100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A7S3Y6Y2_HETAK2.820e-1444.55Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1J3H3J4_NOCCA1.840e-839.53Syntaxin-81 n=2 Tax=Noccaea caerulescens TaxID=107... [more]
A0A5N6PRH6_9ASTR2.840e-839.53Syntaxin-18_N domain-containing protein n=1 Tax=Mi... [more]
V4MG35_EUTSA4.030e-839.53Syntaxin-18_N domain-containing protein n=2 Tax=Eu... [more]
SYP81_ARATH4.790e-839.53Syntaxin-81 n=16 Tax=Brassicaceae TaxID=3700 RepID... [more]
UPI0006A6FB1B1.240e-537.21LOW QUALITY PROTEIN: syntaxin-81 n=1 Tax=Brassica ... [more]
A0A565BGT8_9BRAS1.630e-539.44PWWP domain-containing protein n=1 Tax=Arabis nemo... [more]
A0A0D3CRK1_BRAOL1.640e-537.21PWWP domain-containing protein n=4 Tax=Brassica Ta... [more]
A0A7S2G2T6_9DINO8.540e-531.03Hypothetical protein n=1 Tax=Alexandrium andersoni... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 2..22
NoneNo IPR availableGENE3D1.20.5.110coord: 2..100
e-value: 2.7E-9
score: 38.6
NoneNo IPR availablePANTHERPTHR15959SYNTAXIN-18coord: 2..97
NoneNo IPR availablePANTHERPTHR15959:SF0SYNTAXIN-18coord: 2..97
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 10..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_204contigContig_204:96302..97705 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|149626mRNA_17293Tribonema minus UTEX_B_3156 mRNAContig_204 96302..97705 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|149626|gw1.204.34.1 ID=Trimin1|149626|gw1.204.34.1|Name=jgi.p|Trimin1|149626|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=101bp
LARENAELLEQLKSELDGARQVEVKMAEISGLMSLFATRVAEQQEEMEAI
YGAAMDAHDSLRRGGAHLGKAQQRGLAARKYYVAFMTVMTLLLLFLHLIA
P
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