Trimin1|14739|CE14738_224 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|14739
Unique NameTrimin1|14739|CE14738_224
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length308
Homology
BLAST of jgi.p|Trimin1|14739 vs. uniprot
Match: A0A836CP79_9STRA (RING-CH-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP79_9STRA)

HSP 1 Score: 561 bits (1447), Expect = 2.240e-201
Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 0
Query:    1 MLSDKMARPLAPLQRRRLHHLVLLLLCVAVAHGVKLGGAKAVSSARGHGRAAVESXXXXXXXXXDPAAASPVDKEMAEWIMQQASMYQTRVALLSVELDKKGYGLKGVIPQPPGLICAKSTKEHPLRCRVYMEPEEGSKVVAPCRCKGSQRWIAIRALNQQRRREPLKWSKCPTCQAHIDYSLYEAHMAGLDRVPTAVLNNRGAGRAALAXXXXXXXXXXALIFQGLIIRVVISKVVWGNWDRIQGVWGQSLPLYILGFQWLRKRAAAAFARLEEWVRGELTEVESAVMERTLPETVSAAEAEALAG 307
            MLSDKMARPLAPLQRRRLHHLVLLLLCVAVAHGVKLGGAKAVSSARGHGRAAVESXXXXXXXXXDPAAASPVDKEMAEWIMQQASMYQTRVALLSVELDKKGYGLKGVIPQPPGLICAKSTKEHPLRCRVYMEPEEGSKVVAPCRCKGSQRWIAIRALNQQRRREPLKWSKCPTCQAHIDYSLYEAHMAGLDRVPTAVLNNRGAGRAALAXXXXXXXXXXALIFQGLIIRVVISKVVWGNWDRIQGVWGQSLPLYILGFQWLRKRAAAAFARLEEWVRGELTEVESAVMERTLPETVSAAEAEALAG
Sbjct:    1 MLSDKMARPLAPLQRRRLHHLVLLLLCVAVAHGVKLGGAKAVSSARGHGRAAVESXXXXXXXXXDPAAASPVDKEMAEWIMQQASMYQTRVALLSVELDKKGYGLKGVIPQPPGLICAKSTKEHPLRCRVYMEPEEGSKVVAPCRCKGSQRWIAIRALNQQRRREPLKWSKCPTCQAHIDYSLYEAHMAGLDRVPTAVLNNRGAGRAALAXXXXXXXXXXALIFQGLIIRVVISKVVWGNWDRIQGVWGQSLPLYILGFQWLRKRAAAAFARLEEWVRGELTEVESAVMERTLPETVSAAEAEALAG 307          
BLAST of jgi.p|Trimin1|14739 vs. uniprot
Match: D7G587_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G587_ECTSI)

HSP 1 Score: 204 bits (520), Expect = 5.100e-61
Identity = 101/229 (44.10%), Postives = 142/229 (62.01%), Query Frame = 0
Query:   73 DKEMAEWIMQQASMYQTRVALLSVELDKKGYGLKGVIPQPPGLICAKSTKEHPLRCRVYMEPEEGSKVVAPCRCKGSQRWIAIRALNQQRRREPLKWSKCPTCQAHIDYSLYEAHMAGLDRVPTAVLNNRGAGRAALAXXXXXXXXXXALIFQGLIIRVVISKVVWGNWDRIQGVWGQSLPLYILGFQWLRKRAAAAFARLEEWVRGELTEVESAVMERTLPETVSAAE 301
            D++  EW+M Q  MYQTR AL+S  L +KGY L+ ++P P GL+CA ST+E  + CR+Y+E E G KVVAPC+CKG+Q+WI+  ALN +RR+E  KW  CPTCQ  IDY+LYEA+  G  +  +A+LNN  A R A+           + +   LI+RV+ S V+W N+ R+  +    LPL I+G ++L          +E  VR  LT++ES ++E  LP TV   E
Sbjct:   43 DEKAVEWMMHQLCMYQTRTALISNPLAEKGYKLREIVPSPRGLLCAVSTEERRMDCRMYVEAEVGKKVVAPCKCKGTQKWISFSALNSERRKEAAKWKNCPTCQGPIDYALYEAYGGGAGKAVSAILNNSRATRVAIGVLATMVLWLLSPLLHVLIVRVLTSGVLWKNYHRLTFIVNLPLPLQIMGIRFLMTWTNDQLLLVESMVRQSLTDIESRILESRLPVTVEVRE 271          
BLAST of jgi.p|Trimin1|14739 vs. uniprot
Match: A0A6H5KUK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUK4_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 3.770e-56
Identity = 99/229 (43.23%), Postives = 141/229 (61.57%), Query Frame = 0
Query:   73 DKEMAEWIMQQASMYQTRVALLSVELDKKGYGLKGVIPQPPGLICAKSTKEHPLRCRVYMEPEEGSKVVAPCRCKGSQRWIAIRALNQQRRREPLKWSKCPTCQAHIDYSLYEAHMAGLDRVPTAVLNNRGAGRAALAXXXXXXXXXXALIFQGLIIRVVISKVVWGNWDRIQGVWGQSLPLYILGFQWLRKRAAAAFARLEEWVRGELTEVESAVMERTLPETVSAAE 301
            D++  EW+MQQ  MYQTR AL+S  L +KGY L+ ++P P GL+CA ST+E  + CR+Y+E E    VVAPC+CKG+Q+WI+  ALN +RR+E  KW  CPTCQ  IDY+LYEA+  G  +  +A+LNN  A R A+           + +   LI+RV+ S V+W N+ R+  +    LPL I+G ++L          +E  +R  LT++ES ++E  LP TV   E
Sbjct:  154 DEKAVEWMMQQLCMYQTRTALISNPLAEKGYKLREIVPSPRGLLCALSTEERRMDCRMYVEAE----VVAPCKCKGTQKWISFSALNSERRKEATKWKNCPTCQGPIDYALYEAYGGGAGKAVSAILNNSRATRIAIGVLATMVLWLLSPLLHLLIVRVLTSGVLWKNYHRLTFIVNLPLPLQIMGIRFLMTWTNDQLLLVESMLRQSLTDIESRILESRLPVTVEVRE 378          
BLAST of jgi.p|Trimin1|14739 vs. uniprot
Match: A0A7S3XMD3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMD3_HETAK)

HSP 1 Score: 162 bits (409), Expect = 4.450e-44
Identity = 94/238 (39.50%), Postives = 133/238 (55.88%), Query Frame = 0
Query:   65 DPAAASPVDKEMAEWIMQQASMYQTRVALLSVELDKKGY--GLKGVIPQPPG--LICAKSTKEHPLRCRVYMEPEEGSKVVAPCRCKGSQRWIAIRALNQQRRREPLKWSKCPTCQAHIDYSLYEAHMAGLDRVPTAVLNNRGAGRAALAXXXXXXXXXXALIFQGLIIRVVISKVVWGNWDRIQGVWGQSLPLYILGFQWLRKRAAAAFARLEEWVRGELTEVESAVMERTLPETVS 298
            D    +  D++ A W++ Q  +Y  R ALL+ EL K G+  GL  ++ +  G  L  A ST+E P+ CR+Y E E GSKVVAPC+CKG+Q+WI   ALNQQ R EP K+  C TC+  IDY LY +  AG  +  +A+L      +A +A           L+  GL+ R ++S  +W N+ R  GV    LPL I   Q   K    +F RL + +R  L E ESA++++ LP TV+
Sbjct:   71 DEEELTSYDQDTALWLLNQMHVYHARTALLAKELRKTGHLTGLAAIVQEERGNKLDIALSTEEKPMPCRIYYEAEAGSKVVAPCKCKGTQKWIQWSALNQQWRNEPHKFKNCNTCKTPIDYKLYYSFAAGSTQWLSALLERPARLQALVAAGLAGGAALLGLLLHGLVARALLSAALWRNYHRALGVVYAPLPLKIFVLQLTYKPVLKSFDRLVKRLRDRLVEWESALVQQALPVTVN 308          
BLAST of jgi.p|Trimin1|14739 vs. uniprot
Match: W7TIY3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIY3_9STRA)

HSP 1 Score: 112 bits (281), Expect = 1.280e-24
Identity = 77/242 (31.82%), Postives = 122/242 (50.41%), Query Frame = 0
Query:   74 KEMAEWIMQQASMYQTRVALLSVELDKK---------GYGLKGVIPQPPGLICAKSTKEHPLRCRVYMEPEEGSKVVAPCRCKGSQRWIAIRALNQQRRREPLKWSKCPTCQAHIDYSLYEAHMAGLDRVPTAVLNNRGAGRAALAXXXXXXXXXXALIFQGLIIRVVISKVVWGN---WDRIQGVWGQSLPLYILGFQWLRKRAAAAFARLEEWVRGELTEVESAVMERTLPETVSAAEAE 303
            +E A W+  Q   YQ  +AL +  L K+          +G K      P L   +++  HP  CR++ E + G+K+VAPC C+G+ +W+    +N++RRR+PL   +C TC A IDY  Y+   + L ++ +  L++    R  L                 L+IRV+ S + W     W R+  V+G  LPL I+ ++++ +   + F R E  VR  L E ES ++ER LP TV A + E
Sbjct:  199 EEDAAWLTNQVLTYQAHMALSAEALGKRHAVVGHTPFDFGFKHEEKYRPPLEIVEASPLHPYECRIHGEVDLGAKLVAPCLCRGTGKWMWFADMNRRRRRDPLSSRECGTCHAKIDYQAYQRFGSVLAQLVSWPLDHALTFRCLLLASFVFSSVLFVQPLSILVIRVLTSSLFWRQHSLWARV--VYGP-LPLKIVMYKYVGQLLWSYFLRAEGAVRETLAEAESILLERALPVTVVAEDKE 437          
BLAST of jgi.p|Trimin1|14739 vs. uniprot
Match: A0A4D9D8S7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8S7_9STRA)

HSP 1 Score: 102 bits (255), Expect = 1.800e-22
Identity = 67/204 (32.84%), Postives = 107/204 (52.45%), Query Frame = 0
Query:  103 YGLKGVIPQPPGLICAKSTKEHPLRCRVYMEPEEGSKVVAPCRCKGSQRWIAIRALNQQRRREPLKWSKCPTCQAHIDYSLYEAHMAGLDRVPTAVLNNRGAGRAALAXXXXXXXXXXALIFQGLIIRVVISKVVWGN---WDRIQGVWGQSLPLYILGFQWLRKRAAAAFARLEEWVRGELTEVESAVMERTLPETVSAAEAE 303
            +G K      P L   +++  HP  CR++ E + G+K+VAPC C+G+ +W+    +N++RRR+PL   +C TC A IDY  Y+   + L ++ +  L++    R  L                 L+IRV+ S + W     W R+  V+G  LPL I+ ++++ +   + F R E  VR  L E ES ++ER LP TV A + E
Sbjct:   22 FGFKHEEKYRPPLEIVEASPLHPYECRIHGEVDMGAKLVAPCLCRGTGKWMWFADMNRRRRRDPLSSRECGTCHAKIDYQAYQRFGSVLAQLVSWPLDHALTFRCLLLASFVFSSVLFVQPLSILVIRVLTSSLFWRQHSLWARV--VYGP-LPLKIVMYKYVGQLLWSYFLRAEGAVRETLAEAESILLERALPVTVVAEDKE 222          
BLAST of jgi.p|Trimin1|14739 vs. uniprot
Match: A0A0G4HLA3_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HLA3_9ALVE)

HSP 1 Score: 89.7 bits (221), Expect = 1.600e-16
Identity = 63/190 (33.16%), Postives = 98/190 (51.58%), Query Frame = 0
Query:  118 AKSTKEHPLRCRVYMEPEEGSKVVAPCRCKGSQRWIAIRALNQQRRREPLKWSKCPTCQAHIDYSLYEAHMAGLDRVPTAVLNNRGAGRAALAXXXXXXXXXXALIFQGLIIRVVISKVVWGNWDRIQGVWGQSL----PLYILGFQWLRKRAAAAFARLEEWVRGELTEVESAVMERTLPETVSAAEAE 303
            A S++E P  C +Y+E E+G KVV P   +G+ +W+  RALN  RR+EP K       Q  ID+     H +    + +++L++R   R  LA          A    GL++R+ +S  VW +W+    +W +SL    P  ++   ++  +A AAF  LEE V   L  +ES ++ER LP +   AE E
Sbjct:  227 ALSSEEDPKSCLMYVEAEDGWKVVGP---RGTGKWVTFRALNSMRRKEPDKVKDLWFGQYIIDFDSLIEHASTPTLMVSSLLDSRAGVRTLLAAGLLSGGVAMAPSLWGLLLRLALSGPVWRSWN----LWSRSLSTPAPFKVMTAAYVYWKAQAAFRFLEERVVDRLVALESRMLERDLPVSKGGAEEE 409          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|14739 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A836CP79_9STRA2.240e-201100.00RING-CH-type domain-containing protein n=1 Tax=Tri... [more]
D7G587_ECTSI5.100e-6144.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KUK4_9PHAE3.770e-5643.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3XMD3_HETAK4.450e-4439.50Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
W7TIY3_9STRA1.280e-2431.82Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A4D9D8S7_9STRA1.800e-2232.84Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A0G4HLA3_9ALVE1.600e-1633.16Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..69
IPR011016Zinc finger, RING-CH-typePROSITEPS51292ZF_RING_CHcoord: 120..182
score: 12.161689

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_127contigContig_127:323530..325766 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|14739mRNA_14868Tribonema minus UTEX_B_3156 mRNAContig_127 323530..325815 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|14739|CE14738_224 ID=Trimin1|14739|CE14738_224|Name=jgi.p|Trimin1|14739|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=308bp
MLSDKMARPLAPLQRRRLHHLVLLLLCVAVAHGVKLGGAKAVSSARGHGR
AAVESSEEDDDDAADPAAASPVDKEMAEWIMQQASMYQTRVALLSVELDK
KGYGLKGVIPQPPGLICAKSTKEHPLRCRVYMEPEEGSKVVAPCRCKGSQ
RWIAIRALNQQRRREPLKWSKCPTCQAHIDYSLYEAHMAGLDRVPTAVLN
NRGAGRAALAAAIAAAVAAAALIFQGLIIRVVISKVVWGNWDRIQGVWGQ
SLPLYILGFQWLRKRAAAAFARLEEWVRGELTEVESAVMERTLPETVSAA
EAEALAG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011016Znf_RING-CH