Trimin1|145800|gw1.47.156.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|145800
Unique NameTrimin1|145800|gw1.47.156.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length75
Homology
BLAST of jgi.p|Trimin1|145800 vs. uniprot
Match: A0A835YR85_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR85_9STRA)

HSP 1 Score: 155 bits (393), Expect = 2.770e-48
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0
Query:    1 RFVWPDALHAAFVTAIFDVGLKLASPRVLLDMMPDPQGLTTEHVKSHLQKFRLHRDKSREEFLTKHADGLSKGFD 75
            RFVWPDALHAAFVTAIFDVGLKLASPRVLLDMMPDPQGLTTEHVKSHLQKFRLHRDKSREEFLTKHADGLSKGFD
Sbjct:    1 RFVWPDALHAAFVTAIFDVGLKLASPRVLLDMMPDPQGLTTEHVKSHLQKFRLHRDKSREEFLTKHADGLSKGFD 75          
BLAST of jgi.p|Trimin1|145800 vs. uniprot
Match: D7FKE9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKE9_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 4.070e-21
Identity = 44/63 (69.84%), Postives = 52/63 (82.54%), Query Frame = 0
Query:    1 RFVWPDALHAAFVTAIFDVGLKLASPRVLLDMMPDPQGLTTEHVKSHLQKFRLHRDKSREEFL 63
            RFVW   LH  FV A+FDVGLK ASP++LL+MMP   GLT+EH+KSHLQK+RLHR +SREEFL
Sbjct:  133 RFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFL 195          
BLAST of jgi.p|Trimin1|145800 vs. uniprot
Match: A0A6S6I5N2_9STRA (Phosphorus starvation response 1 n=1 Tax=Nannochloropsis oceanica TaxID=145522 RepID=A0A6S6I5N2_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 6.760e-21
Identity = 42/63 (66.67%), Postives = 53/63 (84.13%), Query Frame = 0
Query:    1 RFVWPDALHAAFVTAIFDVGLKLASPRVLLDMMPDPQGLTTEHVKSHLQKFRLHRDKSREEFL 63
            RFVWPD LH  FV AIFDVGLK ASP+ +L+MM + + LT +H+KSHLQK+RLHR+++REEFL
Sbjct:   78 RFVWPDDLHRDFVAAIFDVGLKCASPKTILEMMNNTKDLTPDHIKSHLQKYRLHRERAREEFL 140          
BLAST of jgi.p|Trimin1|145800 vs. uniprot
Match: A0A7S3LD31_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LD31_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 9.010e-21
Identity = 41/72 (56.94%), Postives = 55/72 (76.39%), Query Frame = 0
Query:    1 RFVWPDALHAAFVTAIFDVGLKLASPRVLLDMMPDPQGLTTEHVKSHLQKFRLHRDKSREEFLTKHADGLSK 72
            RF WPD LH  FV AIFDVGLK +SP  +L+ MP  + +T+E VKSHLQK+R+HR KS++EF++ + +GL K
Sbjct:   85 RFTWPDDLHRDFVAAIFDVGLKHSSPSTILEHMPKHEQITSERVKSHLQKYRIHRIKSKKEFMSSYDEGLKK 156          
BLAST of jgi.p|Trimin1|145800 vs. uniprot
Match: W7U4E9_9STRA (Two-component response regulator arr12 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U4E9_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 1.080e-20
Identity = 41/63 (65.08%), Postives = 53/63 (84.13%), Query Frame = 0
Query:    1 RFVWPDALHAAFVTAIFDVGLKLASPRVLLDMMPDPQGLTTEHVKSHLQKFRLHRDKSREEFL 63
            RFVWPD LH  FV AIFDVGLK ASP+ +++MM + + LT +H+KSHLQK+RLHR+++REEFL
Sbjct:   57 RFVWPDDLHRDFVAAIFDVGLKCASPKTIMEMMSNTKELTPDHIKSHLQKYRLHRERAREEFL 119          
BLAST of jgi.p|Trimin1|145800 vs. uniprot
Match: T0Q2V8_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0Q2V8_SAPDV)

HSP 1 Score: 90.5 bits (223), Expect = 1.570e-19
Identity = 44/74 (59.46%), Postives = 56/74 (75.68%), Query Frame = 0
Query:    1 RFVWPDALHAAFVTAIFDVGLKLASPRVLLDMMPDP---QGLTTEHVKSHLQKFRLHRDKSREEFLTKHADGLS 71
            RF+WPD LH  FV A+FDVGLK ASP+ LL +M +P    GLTTEH+KSHLQK+RL+ D+SR EFL  + + +S
Sbjct:   74 RFIWPDELHRLFVAAVFDVGLKNASPKALLTLMGNPACSNGLTTEHLKSHLQKYRLNYDRSRVEFLKFYDESVS 147          
BLAST of jgi.p|Trimin1|145800 vs. uniprot
Match: A0A397B8B0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397B8B0_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 1.750e-19
Identity = 43/66 (65.15%), Postives = 51/66 (77.27%), Query Frame = 0
Query:    1 RFVWPDALHAAFVTAIFDVGLKLASPRVLLDMMPDP---QGLTTEHVKSHLQKFRLHRDKSREEFL 63
            RF+WPD LH  FV A+FDVGLK ASP+ LL +M  P    GLTTEH+KSHLQK+RL+ D+SR EFL
Sbjct:  117 RFIWPDELHRLFVAAVFDVGLKNASPKALLTLMGTPACTNGLTTEHLKSHLQKYRLNYDRSRVEFL 182          
BLAST of jgi.p|Trimin1|145800 vs. uniprot
Match: A0A1V9Y769_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y769_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 3.750e-19
Identity = 43/66 (65.15%), Postives = 52/66 (78.79%), Query Frame = 0
Query:    1 RFVWPDALHAAFVTAIFDVGLKLASPRVLLDMMPDP---QGLTTEHVKSHLQKFRLHRDKSREEFL 63
            RF+WPD LH  FV A+FDVGLK ASP+ LL +M +P    GLTTEH+KSHLQK+RL+ D+SR EFL
Sbjct:   66 RFIWPDELHRLFVAAVFDVGLKNASPKALLTLMGNPATSSGLTTEHLKSHLQKYRLNYDRSRVEFL 131          
BLAST of jgi.p|Trimin1|145800 vs. uniprot
Match: A0A024TY79_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TY79_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 4.040e-19
Identity = 44/74 (59.46%), Postives = 55/74 (74.32%), Query Frame = 0
Query:    1 RFVWPDALHAAFVTAIFDVGLKLASPRVLLDMMPDP---QGLTTEHVKSHLQKFRLHRDKSREEFLTKHADGLS 71
            RF+WPD LH  FV A+FDVGLK ASP+ LL +M +P    GLTTEH+KSHLQK+RL+ D+SR EFL    + +S
Sbjct:   73 RFIWPDELHRLFVAAVFDVGLKNASPKALLALMGNPACMNGLTTEHLKSHLQKYRLNYDRSRVEFLKYFDESVS 146          
BLAST of jgi.p|Trimin1|145800 vs. uniprot
Match: A0A485KRE8_9STRA (Aste57867_10584 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KRE8_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 4.070e-19
Identity = 43/66 (65.15%), Postives = 52/66 (78.79%), Query Frame = 0
Query:    1 RFVWPDALHAAFVTAIFDVGLKLASPRVLLDMMPDP---QGLTTEHVKSHLQKFRLHRDKSREEFL 63
            RF+WPD LH  FV A+FDVGLK ASP+ LL++M  P    GLTTEH+KSHLQK+RL+ D+SR EFL
Sbjct:  117 RFIWPDELHRLFVAAVFDVGLKNASPKALLNLMGTPACMSGLTTEHLKSHLQKYRLNYDRSRVEFL 182          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|145800 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YR85_9STRA2.770e-48100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
D7FKE9_ECTSI4.070e-2169.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6S6I5N2_9STRA6.760e-2166.67Phosphorus starvation response 1 n=1 Tax=Nannochlo... [more]
A0A7S3LD31_9STRA9.010e-2156.94Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
W7U4E9_9STRA1.080e-2065.08Two-component response regulator arr12 n=2 Tax=Mon... [more]
T0Q2V8_SAPDV1.570e-1959.46Uncharacterized protein n=2 Tax=Saprolegnia diclin... [more]
A0A397B8B0_9STRA1.750e-1965.15Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A1V9Y769_9STRA3.750e-1965.15Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A024TY79_9STRA4.040e-1959.46Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A485KRE8_9STRA4.070e-1965.15Aste57867_10584 protein n=1 Tax=Aphanomyces stella... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.10.60coord: 1..58
e-value: 4.0E-19
score: 70.3
NoneNo IPR availablePANTHERPTHR31442:SF21HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 1..56
IPR006447Myb domain, plantsTIGRFAMTIGR01557TIGR01557coord: 1..54
e-value: 2.8E-13
score: 48.0
IPR044841Transcription factor LUX/BOA-likePANTHERPTHR31442HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 1..56
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 1..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_47contigContig_47:158113..158337 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|145800mRNA_6193Tribonema minus UTEX_B_3156 mRNAContig_47 158113..158337 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|145800|gw1.47.156.1 ID=Trimin1|145800|gw1.47.156.1|Name=jgi.p|Trimin1|145800|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=75bp
RFVWPDALHAAFVTAIFDVGLKLASPRVLLDMMPDPQGLTTEHVKSHLQK
FRLHRDKSREEFLTKHADGLSKGFD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006447Myb_dom_plants
IPR044841LUX/BOA-like
IPR009057Homeobox-like_sf