Trimin1|145214|gw1.129.53.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|145214
Unique Name	Trimin1\|145214\|gw1.129.53.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	106

Homology

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BLAST of jgi.p|Trimin1|145214 vs. uniprot
Match: A0A836CM62_9STRA (Putative 30S ribosomal protein S16 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM62_9STRA)

HSP 1 Score: 220 bits (560), Expect = 8.570e-73
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0

Query:    1 MVVRLRLQRFGHKNQPFYRVVAADARAPRDGKFIEIVGTYNPIPTRDGYKEVRFNRQRIEYWLGVGAEPSERVAWLLGQFNILPLVPRRIFTQNHLPKKERAELLA 106
            MVVRLRLQRFGHKNQPFYRVVAADARAPRDGKFIEIVGTYNPIPTRDGYKEVRFNRQRIEYWLGVGAEPSERVAWLLGQFNILPLVPRRIFTQNHLPKKERAELLA
Sbjct:    1 MVVRLRLQRFGHKNQPFYRVVAADARAPRDGKFIEIVGTYNPIPTRDGYKEVRFNRQRIEYWLGVGAEPSERVAWLLGQFNILPLVPRRIFTQNHLPKKERAELLA 106

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BLAST of jgi.p|Trimin1|145214 vs. uniprot
Match: A0A7S1H3T9_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H3T9_9STRA)

HSP 1 Score: 148 bits (373), Expect = 2.660e-44
Identity = 67/101 (66.34%), Postives = 83/101 (82.18%), Query Frame = 0

Query:    1 MVVRLRLQRFGHKNQPFYRVVAADARAPRDGKFIEIVGTYNPIPTRDGYKEVRFNRQRIEYWLGVGAEPSERVAWLLGQFNILPLVPRRIFTQNHLPKKER 101
            MVVRLRLQRFG K+ PFYR+VAAD RAPRDGKF+E+VGTYNPI ++DG KE+R    R++YWL VGA+PS+RVAW+LG+F ILP  P+R   Q  +PKK+R
Sbjct:    1 MVVRLRLQRFGRKHLPFYRMVAADHRAPRDGKFLEVVGTYNPIASKDGIKEIRLKTDRLKYWLAVGAQPSDRVAWILGKFGILPPPPQRYSPQRMIPKKDR 101

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BLAST of jgi.p|Trimin1|145214 vs. uniprot
Match: A0A7S3PWJ7_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PWJ7_9STRA)

HSP 1 Score: 147 bits (372), Expect = 3.780e-44
Identity = 65/103 (63.11%), Postives = 85/103 (82.52%), Query Frame = 0

Query:    1 MVVRLRLQRFGHKNQPFYRVVAADARAPRDGKFIEIVGTYNPIPTRDGYKEVRFNRQRIEYWLGVGAEPSERVAWLLGQFNILPLVPRRIFTQNHLPKKERAE 103
            M VRLRLQRFG  ++PFYR+VAAD+RAPRDGKF+EIVGTYNPI T++G KE+R    R++YWLGVGA+PS+RV+W+LG+F +LP  P R+  Q  +PKK+R +
Sbjct:    1 MPVRLRLQRFGRTHRPFYRMVAADSRAPRDGKFLEIVGTYNPIATKEGIKEIRLKTDRLKYWLGVGAQPSDRVSWILGKFGVLPPPPPRVSLQKMIPKKDRED 103

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BLAST of jgi.p|Trimin1|145214 vs. uniprot
Match: A0A7S1VML7_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VML7_9STRA)

HSP 1 Score: 145 bits (367), Expect = 2.320e-43
Identity = 68/101 (67.33%), Postives = 81/101 (80.20%), Query Frame = 0

Query:    1 MVVRLRLQRFGHKNQPFYRVVAADARAPRDGKFIEIVGTYNPIPTRDGYKEVRFNRQRIEYWLGVGAEPSERVAWLLGQFNILPLVPRRIFTQNHLPKKER 101
            MVVRLRLQRFG +N+PFYR+VAA+ RAPRDGKF+EI+GTYNPI TR G KE+R    RI+YWL VGA+PS+RV+W+LG+F ILP  P R  TQ    KKER
Sbjct:    1 MVVRLRLQRFGKRNRPFYRMVAANVRAPRDGKFLEIIGTYNPIATRAGLKEIRLKTDRIKYWLSVGAQPSDRVSWILGKFGILPPPPPRFSTQAMFTKKER 101

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BLAST of jgi.p|Trimin1|145214 vs. uniprot
Match: K8ZAJ3_NANGC (Small subunit ribosomal protein S16 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8ZAJ3_NANGC)

HSP 1 Score: 147 bits (371), Expect = 4.570e-43
Identity = 66/105 (62.86%), Postives = 87/105 (82.86%), Query Frame = 0

Query:    1 MVVRLRLQRFGHKNQPFYRVVAADARAPRDGKFIEIVGTYNPIPTRDGYKEVRFNRQRIEYWLGVGAEPSERVAWLLGQFNILPLVPRRIFTQNHLPKKERAELL 105
            MVVRLRLQRFG  ++PFYR+VAAD+RAPRDG+FIE +G+Y+PI ++DG KEVR +  RI+YWL VGA+PS+RVAWL+ ++N+LP  P R  T  HLP+KER E++
Sbjct:    1 MVVRLRLQRFGRHDRPFYRIVAADSRAPRDGRFIERLGSYDPIASKDGVKEVRLHSDRIKYWLSVGAQPSDRVAWLMSKYNLLPEAPLRPMTLRHLPRKERKEVV 105

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BLAST of jgi.p|Trimin1|145214 vs. uniprot
Match: A0A7S0C1J3_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C1J3_9STRA)

HSP 1 Score: 144 bits (364), Expect = 6.260e-43
Identity = 65/103 (63.11%), Postives = 81/103 (78.64%), Query Frame = 0

Query:    1 MVVRLRLQRFGHKNQPFYRVVAADARAPRDGKFIEIVGTYNPIPTRDGYKEVRFNRQRIEYWLGVGAEPSERVAWLLGQFNILPLVPRRIFTQNHLPKKERAE 103
            MVVRLRLQRFG  + PFYR+VAA+ARAPRDGKF+EIVG+YNPIP + G KEVR    R+ YW+ VGA+PS+RVAW+LG+F +LP  P +   Q  +PKK+R E
Sbjct:    1 MVVRLRLQRFGRTHSPFYRMVAANARAPRDGKFLEIVGSYNPIPNKHGIKEVRLKTDRLRYWISVGAQPSDRVAWVLGKFGVLPPAPPKFSPQKMIPKKDRPE 103

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BLAST of jgi.p|Trimin1|145214 vs. uniprot
Match: A0A7R9W8Z9_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W8Z9_9STRA)

HSP 1 Score: 144 bits (363), Expect = 8.630e-43
Identity = 67/101 (66.34%), Postives = 81/101 (80.20%), Query Frame = 0

Query:    3 VRLRLQRFGHKNQPFYRVVAADARAPRDGKFIEIVGTYNPIPTRDGYKEVRFNRQRIEYWLGVGAEPSERVAWLLGQFNILPLVPRRIFTQNHLPKKERAE 103
            VRLRLQRFG K+ PFYR+VAA+ARAPRDGKF+EIVGTYNPI  + G KE+R    R++YWL VGA+PS+RVAW+LG+F ILP  P R   QN +PKK+R E
Sbjct:    1 VRLRLQRFGKKHCPFYRMVAANARAPRDGKFLEIVGTYNPIANKHGIKEIRLKTDRLKYWLSVGAQPSDRVAWILGKFGILPPPPPRYSPQNMIPKKDREE 101

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BLAST of jgi.p|Trimin1|145214 vs. uniprot
Match: A0A448ZHY9_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZHY9_9STRA)

HSP 1 Score: 142 bits (358), Expect = 4.990e-42
Identity = 67/103 (65.05%), Postives = 79/103 (76.70%), Query Frame = 0

Query:    1 MVVRLRLQRFGHKNQPFYRVVAADARAPRDGKFIEIVGTYNPIPTRDGYKEVRFNRQRIEYWLGVGAEPSERVAWLLGQFNILPLVPRRIFTQNHLPKKERAE 103
            MVVRLRLQRFG  + PFYR+VAA+ARAPRDGKF+EIVGTYNPI  RDG KE+R    R++YWLGVGA+PS+RVAW+LG+F ILP  P R   +    KK   E
Sbjct:    1 MVVRLRLQRFGRTHAPFYRMVAANARAPRDGKFLEIVGTYNPIANRDGMKEIRLKEDRLKYWLGVGAQPSDRVAWILGKFGILPPPPXRFNPEKSRVKKAEEE 103

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BLAST of jgi.p|Trimin1|145214 vs. uniprot
Match: A0A8K1FHQ9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHQ9_PYTOL)

HSP 1 Score: 141 bits (356), Expect = 1.040e-41
Identity = 66/101 (65.35%), Postives = 81/101 (80.20%), Query Frame = 0

Query:    1 MVVRLRLQRFGHKNQPFYRVVAADARAPRDGKFIEIVGTYNPIPTRDGYKEVRFNRQRIEYWLGVGAEPSERVAWLLGQFNILPLVPRRIFTQNHLPKKER 101
            MVVRLRL R+G K+ PFYR+VAADARAPRDGK +EIVGT+NPI   DG KE+R N +R+ YW+ VGA+PS+RVA LLG  NILP+ P R +T+  +PKKER
Sbjct:    1 MVVRLRLARWGRKDLPFYRIVAADARAPRDGKHLEIVGTFNPIAATDGVKELRVNSERVRYWISVGAQPSDRVAHLLGMANILPMPPTRQYTKKSVPKKER 101

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BLAST of jgi.p|Trimin1|145214 vs. uniprot
Match: A0A7S1ZG56_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZG56_TRICV)

HSP 1 Score: 141 bits (355), Expect = 1.560e-41
Identity = 66/101 (65.35%), Postives = 77/101 (76.24%), Query Frame = 0

Query:    1 MVVRLRLQRFGHKNQPFYRVVAADARAPRDGKFIEIVGTYNPIPTRDGYKEVRFNRQRIEYWLGVGAEPSERVAWLLGQFNILPLVPRRIFTQNHLPKKER 101
            MVVRLRLQRFG K  PFYR+VAA++RAPRDGKF EIVGTYNPI    G KE+R    R+ YWL VGA+PS+RVAW+LG+F ILP  P R   Q  +PKK+R
Sbjct:    1 MVVRLRLQRFGQKKLPFYRMVAANSRAPRDGKFFEIVGTYNPIANASGIKEIRLKTDRLRYWLSVGAQPSDRVAWILGKFGILPPPPPRYSPQRMIPKKDR 101

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|145214 vs. uniprot

BLAST of jgi.p|Trimin1|145214 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CM62_9STRA	8.570e-73	100.00	Putative 30S ribosomal protein S16 n=1 Tax=Tribone...	[more]
A0A7S1H3T9_9STRA	2.660e-44	66.34	Hypothetical protein n=1 Tax=Thalassionema nitzsch...	[more]
A0A7S3PWJ7_9STRA	3.780e-44	63.11	Hypothetical protein n=1 Tax=Chaetoceros debilis T...	[more]
A0A7S1VML7_9STRA	2.320e-43	67.33	Hypothetical protein n=1 Tax=Grammatophora oceanic...	[more]
K8ZAJ3_NANGC	4.570e-43	62.86	Small subunit ribosomal protein S16 n=3 Tax=Monodo...	[more]
A0A7S0C1J3_9STRA	6.260e-43	63.11	Hypothetical protein n=1 Tax=Proboscia inermis Tax...	[more]
A0A7R9W8Z9_9STRA	8.630e-43	66.34	Hypothetical protein n=1 Tax=Pseudictyota dubia Ta...	[more]
A0A448ZHY9_9STRA	4.990e-42	65.05	Uncharacterized protein n=1 Tax=Pseudo-nitzschia m...	[more]
A0A8K1FHQ9_PYTOL	1.040e-41	65.35	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A7S1ZG56_TRICV	1.560e-41	65.35	Hypothetical protein n=1 Tax=Trieres chinensis Tax...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023803	Ribosomal protein S16 domain superfamily	GENE3D	3.30.1320.10		coord: 1..105 e-value: 1.6E-39 score: 136.6
IPR023803	Ribosomal protein S16 domain superfamily	SUPERFAMILY	54565	Ribosomal protein S16	coord: 3..97
IPR000307	Ribosomal protein S16	TIGRFAM	TIGR00002	TIGR00002	coord: 3..82 e-value: 3.0E-30 score: 102.0
IPR000307	Ribosomal protein S16	PFAM	PF00886	Ribosomal_S16	coord: 9..70 e-value: 6.1E-27 score: 93.4
IPR000307	Ribosomal protein S16	PANTHER	PTHR12919	30S RIBOSOMAL PROTEIN S16	coord: 1..94
IPR000307	Ribosomal protein S16	HAMAP	MF_00385	Ribosomal_S16	coord: 2..80 score: 23.439758
None	No IPR available	PANTHER	PTHR12919:SF20	37S RIBOSOMAL PROTEIN S16, MITOCHONDRIAL	coord: 1..94

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_129	contig	Contig_129:192834..193588 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|145214	mRNA_9838	Tribonema minus UTEX_B_3156	mRNA	Contig_129 192834..193588 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|145214|gw1.129.53.1 ID=Trimin1|145214|gw1.129.53.1|Name=jgi.p|Trimin1|145214|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=106bp
MVVRLRLQRFGHKNQPFYRVVAADARAPRDGKFIEIVGTYNPIPTRDGYK
EVRFNRQRIEYWLGVGAEPSERVAWLLGQFNILPLVPRRIFTQNHLPKKE
RAELLA

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR023803	Ribosomal_S16_dom_sf
IPR000307	Ribosomal_S16