Trimin1|144928|gw1.21.123.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|144928
Unique Name	Trimin1\|144928\|gw1.21.123.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	289

Homology

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BLAST of jgi.p|Trimin1|144928 vs. uniprot
Match: A0A836CHT0_9STRA (Armadillo-type protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHT0_9STRA)

HSP 1 Score: 179 bits (455), Expect = 1.830e-51
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0

Query:    1 DGAAVVSIMHHCSSVGAVQARCAQLLADMAVDAASRTKLSADGACEGVVAGMITHVQNADVQWQCAGAVSSLSDGCFSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHKMSFDFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIWLSFENVANTIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIGDLAVDAA 208
            DGAAVVSIMHHCSSVGAVQARCAQLLADMAVDAASRTKLSADGACEGVVAGMITHVQNADVQWQCAGAVSSLSDGCFSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHKMSFDFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIWLSFENVANTIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIGDLAVDAA
Sbjct:    1 DGAAVVSIMHHCSSVGAVQARCAQLLADMAVDAASRTKLSADGACEGVVAGMITHVQNADVQWQCAGAVSSLSDGCFSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHKMSFDFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIWLSFENVANTIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIGDLAVDAA 208

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|144928 vs. uniprot

BLAST of jgi.p|Trimin1|144928 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A836CHT0_9STRA	1.830e-51	100.00	Armadillo-type protein (Fragment) n=1 Tax=Tribonem...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 3..289 e-value: 1.6E-29 score: 104.8
None	No IPR available	PANTHER	PTHR22895:SF7	PROTEIN AARDVARK	coord: 4..188
None	No IPR available	PANTHER	PTHR22895:SF7	PROTEIN AARDVARK	coord: 173..280
None	No IPR available	PANTHER	PTHR22895	UNCHARACTERIZED	coord: 173..280 coord: 4..188
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 16..288

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_21	contig	Contig_21:1085296..1086162 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|144928	mRNA_7220	Tribonema minus UTEX_B_3156	mRNA	Contig_21 1085296..1086162 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|144928|gw1.21.123.1 ID=Trimin1|144928|gw1.21.123.1|Name=jgi.p|Trimin1|144928|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=289bp
DGAAVVSIMHHCSSVGAVQARCAQLLADMAVDAASRTKLSADGACEGVVA
GMITHVQNADVQWQCAGAVSSLSDGCFSNRNKLRAAGVCNALVAGMAAHK
HNPAVQWRGACAVHKMSFDFDNRTELGKAGACEAAVTGMLKHKHNANVQQ
ACALAIIWLSFENVANTIRLGAAGACEAVLAGVLAHDHNVDVQDRCAQAI
GDLAVDAANCANLGAAGACETVVNVMLVHRPHANVQWHCARAVNNLANNT
ANNNQLGAAGACAAIVTAMRAHTDNPTVQQWCRSAVDRL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011989	ARM-like
IPR016024	ARM-type_fold