Trimin1|144805|gw1.21.121.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|144805
Unique NameTrimin1|144805|gw1.21.121.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length53
Homology
BLAST of jgi.p|Trimin1|144805 vs. uniprot
Match: A0A835ZB57_9STRA (AMP-binding domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB57_9STRA)

HSP 1 Score: 111 bits (277), Expect = 3.090e-31
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0
Query:    1 QTAETIDEEGWLHSGDVATFDDNNRTDMPAPSGFMRITGRIKELIITAGGENV 53
            QTAETIDEEGWLHSGDVATFDDNNRTDMPAPSGFMRITGRIKELIITAGGENV
Sbjct:    1 QTAETIDEEGWLHSGDVATFDDNNRTDMPAPSGFMRITGRIKELIITAGGENV 53          
BLAST of jgi.p|Trimin1|144805 vs. uniprot
Match: A0A835Z6J1_9STRA (Long chain acyl-CoA synthetase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6J1_9STRA)

HSP 1 Score: 109 bits (273), Expect = 1.120e-26
Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0
Query:    1 QTAETIDEEGWLHSGDVATFDDNNRTDMPAPSGFMRITGRIKELIITAGGENV 53
            +TAETIDEEGWLHSGDVATFDDNNRTDMPAPSGFMRITGRIKELIITAGGENV
Sbjct:  463 KTAETIDEEGWLHSGDVATFDDNNRTDMPAPSGFMRITGRIKELIITAGGENV 515          
BLAST of jgi.p|Trimin1|144805 vs. uniprot
Match: D7G3S9_ECTSI (Long chain acyl-coA synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3S9_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 1.070e-19
Identity = 41/53 (77.36%), Postives = 47/53 (88.68%), Query Frame = 0
Query:    1 QTAETIDEEGWLHSGDVATFDDNNRTDMPAPSGFMRITGRIKELIITAGGENV 53
            +TAETIDE+GW+HSGDVATFD++    +  PSGFMRITGRIKELIITAGGENV
Sbjct:   94 KTAETIDEDGWMHSGDVATFDEDGDPRIEGPSGFMRITGRIKELIITAGGENV 146          
BLAST of jgi.p|Trimin1|144805 vs. uniprot
Match: A0A6H5K7V3_9PHAE (AMP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7V3_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 1.510e-18
Identity = 40/53 (75.47%), Postives = 47/53 (88.68%), Query Frame = 0
Query:    1 QTAETIDEEGWLHSGDVATFDDNNRTDMPAPSGFMRITGRIKELIITAGGENV 53
            +TAETIDE+GW+HSGDVATFD++    +  PSGF+RITGRIKELIITAGGENV
Sbjct:  191 KTAETIDEDGWMHSGDVATFDEDGDPRITGPSGFVRITGRIKELIITAGGENV 243          
BLAST of jgi.p|Trimin1|144805 vs. uniprot
Match: D7G3T1_ECTSI (Long chain acyl-coA synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3T1_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 2.810e-18
Identity = 39/53 (73.58%), Postives = 47/53 (88.68%), Query Frame = 0
Query:    1 QTAETIDEEGWLHSGDVATFDDNNRTDMPAPSGFMRITGRIKELIITAGGENV 53
            +TAETIDE+GW+HSGDVATFD++    +  PSGF+RITGRIKELIITAGGEN+
Sbjct:  466 KTAETIDEDGWMHSGDVATFDEDGDPRIEGPSGFVRITGRIKELIITAGGENI 518          
BLAST of jgi.p|Trimin1|144805 vs. uniprot
Match: A0A6H5KWQ0_9PHAE (AMP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ0_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 3.830e-18
Identity = 40/53 (75.47%), Postives = 46/53 (86.79%), Query Frame = 0
Query:    1 QTAETIDEEGWLHSGDVATFDDNNRTDMPAPSGFMRITGRIKELIITAGGENV 53
            +TAETIDE+GW+HSGDVATFD++       PSGFM+ITGRIKELIITAGGENV
Sbjct:  466 KTAETIDEDGWMHSGDVATFDEDGDDRTEGPSGFMQITGRIKELIITAGGENV 518          
BLAST of jgi.p|Trimin1|144805 vs. uniprot
Match: A0A482RSC8_9ARCH (AMP-binding domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RSC8_9ARCH)

HSP 1 Score: 82.4 bits (202), Expect = 2.730e-17
Identity = 38/53 (71.70%), Postives = 47/53 (88.68%), Query Frame = 0
Query:    1 QTAETIDEEGWLHSGDVATFDDNNRTDMPAPSGFMRITGRIKELIITAGGENV 53
            +T+ETID +G+LHSGDVA FD ++  ++P PSGFMRITGRIKEL+ITAGGENV
Sbjct:  160 ETSETIDADGYLHSGDVAEFDSDHDPNVPKPSGFMRITGRIKELLITAGGENV 212          
BLAST of jgi.p|Trimin1|144805 vs. uniprot
Match: A0A7S2VCD9_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VCD9_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 1.420e-16
Identity = 38/53 (71.70%), Postives = 44/53 (83.02%), Query Frame = 0
Query:    1 QTAETIDEEGWLHSGDVATFDDNNRTDMPAPSGFMRITGRIKELIITAGGENV 53
            +T +TIDEEGW++SGDV  FDD+N   +  PSGFM ITGRIKELIITAGGENV
Sbjct:  240 ETKKTIDEEGWMYSGDVVKFDDHNDPAIAKPSGFMTITGRIKELIITAGGENV 292          
BLAST of jgi.p|Trimin1|144805 vs. uniprot
Match: A0A7S2Y6D0_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y6D0_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 1.620e-16
Identity = 38/53 (71.70%), Postives = 44/53 (83.02%), Query Frame = 0
Query:    1 QTAETIDEEGWLHSGDVATFDDNNRTDMPAPSGFMRITGRIKELIITAGGENV 53
            +T +TIDEEGW++SGDV  FDD+N   +  PSGFM ITGRIKELIITAGGENV
Sbjct:  467 ETKKTIDEEGWMYSGDVVKFDDHNDPAIAKPSGFMTITGRIKELIITAGGENV 519          
BLAST of jgi.p|Trimin1|144805 vs. uniprot
Match: A0A7S3M9T8_9STRA (Hypothetical protein n=3 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M9T8_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 4.090e-16
Identity = 38/53 (71.70%), Postives = 46/53 (86.79%), Query Frame = 0
Query:    1 QTAETIDEEGWLHSGDVATFDDNNRTDMPAPSGFMRITGRIKELIITAGGENV 53
            +TAETID++G+LHSGDVA FD++   D+  P GFM+ITGRIKELIITAGGENV
Sbjct:  348 KTAETIDDDGFLHSGDVAEFDNDVDKDIVGPGGFMKITGRIKELIITAGGENV 400          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|144805 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZB57_9STRA3.090e-31100.00AMP-binding domain-containing protein (Fragment) n... [more]
A0A835Z6J1_9STRA1.120e-2698.11Long chain acyl-CoA synthetase n=1 Tax=Tribonema m... [more]
D7G3S9_ECTSI1.070e-1977.36Long chain acyl-coA synthetase n=1 Tax=Ectocarpus ... [more]
A0A6H5K7V3_9PHAE1.510e-1875.47AMP-binding domain-containing protein n=1 Tax=Ecto... [more]
D7G3T1_ECTSI2.810e-1873.58Long chain acyl-coA synthetase n=1 Tax=Ectocarpus ... [more]
A0A6H5KWQ0_9PHAE3.830e-1875.47AMP-binding domain-containing protein n=1 Tax=Ecto... [more]
A0A482RSC8_9ARCH2.730e-1771.70AMP-binding domain-containing protein (Fragment) n... [more]
A0A7S2VCD9_9STRA1.420e-1671.70Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S2Y6D0_9STRA1.620e-1671.70Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S3M9T8_9STRA4.090e-1671.70Hypothetical protein n=3 Tax=Spumella elongata Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042099ANL, N-terminal domainGENE3D3.40.50.12780coord: 1..44
e-value: 9.5E-7
score: 29.6
IPR000873AMP-dependent synthetase/ligasePFAMPF00501AMP-bindingcoord: 1..47
e-value: 2.1E-7
score: 29.9
NoneNo IPR availablePANTHERPTHR43272LONG-CHAIN-FATTY-ACID--COA LIGASEcoord: 1..53
NoneNo IPR availablePANTHERPTHR43272:SF32LONG-CHAIN-FATTY-ACID--COA LIGASE ACSBG2coord: 1..53
NoneNo IPR availableSUPERFAMILY56801Acetyl-CoA synthetase-likecoord: 2..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_21contigContig_21:706286..706444 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|144805mRNA_7183Tribonema minus UTEX_B_3156 mRNAContig_21 706286..706444 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|144805|gw1.21.121.1 ID=Trimin1|144805|gw1.21.121.1|Name=jgi.p|Trimin1|144805|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=53bp
QTAETIDEEGWLHSGDVATFDDNNRTDMPAPSGFMRITGRIKELIITAGG
ENV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042099ANL_N_sf
IPR000873AMP-dep_Synth/Lig