Trimin1|144692|gw1.96.41.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|144692
Unique NameTrimin1|144692|gw1.96.41.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length65
Homology
BLAST of jgi.p|Trimin1|144692 vs. uniprot
Match: A0A835YH74_9STRA (HECT domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH74_9STRA)

HSP 1 Score: 140 bits (352), Expect = 2.490e-42
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0
Query:    1 DADVSVDQQLPRAHTCFFSINLPRYSCDNVMAERLKYAMYNCIEMDADFRLADTETTGWGNAEVV 65
            DADVSVDQQLPRAHTCFFSINLPRYSCDNVMAERLKYAMYNCIEMDADFRLADTETTGWGNAEVV
Sbjct:    1 DADVSVDQQLPRAHTCFFSINLPRYSCDNVMAERLKYAMYNCIEMDADFRLADTETTGWGNAEVV 65          
BLAST of jgi.p|Trimin1|144692 vs. uniprot
Match: A0A835YUD8_9STRA (HECT domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUD8_9STRA)

HSP 1 Score: 118 bits (296), Expect = 9.560e-34
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
Query:    1 DADVSVDQQLPRAHTCFFSINLPRYSCDNVMAERLKYAMYNCIEMDADFRLADTE 55
            DADVSVDQQLPRAHTCFFSINLPRYSCDNVMAERLKYAMYNCIEMDADFRLADTE
Sbjct:   14 DADVSVDQQLPRAHTCFFSINLPRYSCDNVMAERLKYAMYNCIEMDADFRLADTE 68          
BLAST of jgi.p|Trimin1|144692 vs. uniprot
Match: A0A7S2R3W8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R3W8_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 2.540e-24
Identity = 41/57 (71.93%), Postives = 49/57 (85.96%), Query Frame = 0
Query:    7 DQQLPRAHTCFFSINLPRYSCDNVMAERLKYAMYNCIEMDADFRLADTETTGWGNAE 63
            D  LP+AHTCFFS+NLP+YS D +MA RL+YAMYNCIEMDADFRLA+ E TGWG+ +
Sbjct:   85 DVFLPKAHTCFFSLNLPKYSADEIMATRLRYAMYNCIEMDADFRLAENEMTGWGDLD 141          
BLAST of jgi.p|Trimin1|144692 vs. uniprot
Match: A0A6U3W0M3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3W0M3_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 7.470e-24
Identity = 42/61 (68.85%), Postives = 52/61 (85.25%), Query Frame = 0
Query:    5 SVDQQLPRAHTCFFSINLPRYSCDNVMAERLKYAMYNCIEMDADFRLADTETTGWGNAEVV 65
            S D  LP+AHTCFFS+NLPRYS D +MAE+L++AMYNCIEMDADFRLAD+E  GWG+ + +
Sbjct:  160 SPDTYLPKAHTCFFSLNLPRYSSDAIMAEKLRFAMYNCIEMDADFRLADSEMGGWGDIDEI 220          
BLAST of jgi.p|Trimin1|144692 vs. uniprot
Match: A0A6H5JS79_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS79_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 5.040e-21
Identity = 41/55 (74.55%), Postives = 45/55 (81.82%), Query Frame = 0
Query:    7 DQQLPRAHTCFFSINLPRYSCDNVMAERLKYAMYNCIEMDADFRLADTETTGWGN 61
            D+ LP+AHTCFFSINLPRYS D +MA +L Y MYNCIEMDADFRLAD E  GW N
Sbjct: 4533 DRFLPKAHTCFFSINLPRYSSDEIMANKLSYTMYNCIEMDADFRLADNEMPGWEN 4587          
BLAST of jgi.p|Trimin1|144692 vs. uniprot
Match: A0A2D4CIK0_PYTIN (HECT E3 ubiquitin ligase, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CIK0_PYTIN)

HSP 1 Score: 87.8 bits (216), Expect = 8.160e-19
Identity = 35/55 (63.64%), Postives = 46/55 (83.64%), Query Frame = 0
Query:    5 SVDQQLPRAHTCFFSINLPRYSCDNVMAERLKYAMYNCIEMDADFRLADTETTGW 59
            + DQQLP++HTCFF++ LPRYS D +  ++L YA++NC+EMD DFRLADTE TGW
Sbjct:  386 TADQQLPKSHTCFFALQLPRYSTDEICRKQLLYAIHNCVEMDGDFRLADTEMTGW 440          
BLAST of jgi.p|Trimin1|144692 vs. uniprot
Match: A0A2D4CHI1_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CHI1_PYTIN)

HSP 1 Score: 87.8 bits (216), Expect = 9.960e-19
Identity = 35/55 (63.64%), Postives = 46/55 (83.64%), Query Frame = 0
Query:    5 SVDQQLPRAHTCFFSINLPRYSCDNVMAERLKYAMYNCIEMDADFRLADTETTGW 59
            + DQQLP++HTCFF++ LPRYS D +  ++L YA++NC+EMD DFRLADTE TGW
Sbjct:  912 TADQQLPKSHTCFFALQLPRYSTDEICRKQLLYAIHNCVEMDGDFRLADTEMTGW 966          
BLAST of jgi.p|Trimin1|144692 vs. uniprot
Match: A0A2D4CHZ9_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CHZ9_PYTIN)

HSP 1 Score: 87.8 bits (216), Expect = 9.980e-19
Identity = 35/55 (63.64%), Postives = 46/55 (83.64%), Query Frame = 0
Query:    5 SVDQQLPRAHTCFFSINLPRYSCDNVMAERLKYAMYNCIEMDADFRLADTETTGW 59
            + DQQLP++HTCFF++ LPRYS D +  ++L YA++NC+EMD DFRLADTE TGW
Sbjct: 1153 TADQQLPKSHTCFFALQLPRYSTDEICRKQLLYAIHNCVEMDGDFRLADTEMTGW 1207          
BLAST of jgi.p|Trimin1|144692 vs. uniprot
Match: A0A7S2RG93_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RG93_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 1.370e-18
Identity = 36/58 (62.07%), Postives = 48/58 (82.76%), Query Frame = 0
Query:    7 DQQLPRAHTCFFSINLPRYSCDNVMAERLKYAMYNCIEMDADFRLADTETTGWGNAEV 64
            D+ LP+AHTCFF+++LPRY+ D VM E+L YA+ NC+EMDADFRL +TE TGW + +V
Sbjct: 1813 DEWLPKAHTCFFALSLPRYTSDEVMKEKLLYAIQNCLEMDADFRLTETEMTGWDDQQV 1870          
BLAST of jgi.p|Trimin1|144692 vs. uniprot
Match: W2PWJ9_PHYPN (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2PWJ9_PHYPN)

HSP 1 Score: 87.0 bits (214), Expect = 1.880e-18
Identity = 35/54 (64.81%), Postives = 45/54 (83.33%), Query Frame = 0
Query:    6 VDQQLPRAHTCFFSINLPRYSCDNVMAERLKYAMYNCIEMDADFRLADTETTGW 59
            +D Q+P++HTCFF++ LPRYS D++  ERL YA+ NC+EMD DFRLADTE TGW
Sbjct: 4492 MDSQMPKSHTCFFALQLPRYSSDDICRERLLYAVRNCVEMDGDFRLADTEMTGW 4545          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|144692 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YH74_9STRA2.490e-42100.00HECT domain-containing protein (Fragment) n=1 Tax=... [more]
A0A835YUD8_9STRA9.560e-34100.00HECT domain-containing protein (Fragment) n=1 Tax=... [more]
A0A7S2R3W8_9STRA2.540e-2471.93Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A6U3W0M3_9STRA7.470e-2468.85Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6H5JS79_9PHAE5.040e-2174.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2D4CIK0_PYTIN8.160e-1963.64HECT E3 ubiquitin ligase, putative n=1 Tax=Pythium... [more]
A0A2D4CHI1_PYTIN9.960e-1963.64Uncharacterized protein n=2 Tax=Pythium insidiosum... [more]
A0A2D4CHZ9_PYTIN9.980e-1963.64Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A7S2RG93_9STRA1.370e-1862.07Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
W2PWJ9_PHYPN1.880e-1864.81Uncharacterized protein n=9 Tax=Phytophthora TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.2410.10Hect, E3 ligase catalytic domaincoord: 2..48
e-value: 4.0E-11
score: 44.9
NoneNo IPR availablePIRSRPIRSR001569-1PIRSR001569-1coord: 5..43
e-value: 8.4E-7
score: 25.8
IPR000569HECT domainPFAMPF00632HECTcoord: 6..43
e-value: 8.7E-9
score: 35.3
IPR000569HECT domainPROSITEPS50237HECTcoord: 1..52
score: 12.623292
IPR035983HECT, E3 ligase catalytic domainSUPERFAMILY56204Hect, E3 ligase catalytic domaincoord: 7..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_96contigContig_96:509884..510078 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|144692mRNA_13086Tribonema minus UTEX_B_3156 mRNAContig_96 509884..510078 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|144692|gw1.96.41.1 ID=Trimin1|144692|gw1.96.41.1|Name=jgi.p|Trimin1|144692|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=65bp
DADVSVDQQLPRAHTCFFSINLPRYSCDNVMAERLKYAMYNCIEMDADFR
LADTETTGWGNAEVV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000569HECT_dom
IPR035983Hect_E3_ubiquitin_ligase