Trimin1|144543|gw1.16.150.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|144543
Unique Name	Trimin1\|144543\|gw1.16.150.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	180

Homology

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BLAST of jgi.p|Trimin1|144543 vs. uniprot
Match: A0A835Z8I9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8I9_9STRA)

HSP 1 Score: 117 bits (294), Expect = 3.610e-30
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0

Query:    1 GPKICEIEGCTKKAQHGGDVTRLCVGHGGGPRCVHVDDDGAPCTKSARAGTD 52
            GPKICEIEGCTKKAQHGGDVTRLCVGHGGGPRCVHVDDDGAPCTKSARAGTD
Sbjct:    1 GPKICEIEGCTKKAQHGGDVTRLCVGHGGGPRCVHVDDDGAPCTKSARAGTD 52

[Close]

BLAST of jgi.p|Trimin1|144543 vs. uniprot
Match: A0A835Z7U3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7U3_9STRA)

HSP 1 Score: 49.3 bits (116), Expect = 8.590e-5
Identity = 23/33 (69.70%), Postives = 25/33 (75.76%), Query Frame = 0

Query:   20 VTRLCVGHGGGPRCVHVDDDGAPCTKSARAGTD 52
             T LC  HGG  RC+HVD DGAPCTKSA+A TD
Sbjct:    9 ATDLCKAHGG-KRCLHVDGDGAPCTKSAQAPTD 40

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|144543 vs. uniprot

BLAST of jgi.p|Trimin1|144543 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835Z8I9_9STRA	3.610e-30	100.00	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A835Z7U3_9STRA	8.590e-5	69.70	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31827	EMB\|CAB89363.1	coord: 1..180
None	No IPR available	PANTHER	PTHR31827:SF40	F22C12.10	coord: 1..180

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_16	contig	Contig_16:1412665..1413204 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|144543	mRNA_3089	Tribonema minus UTEX_B_3156	mRNA	Contig_16 1412665..1413204 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|144543|gw1.16.150.1 ID=Trimin1|144543|gw1.16.150.1|Name=jgi.p|Trimin1|144543|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=180bp
GPKICEIEGCTKKAQHGGDVTRLCVGHGGGPRCVHVDDDGAPCTKSARAG
TDLCQRHGGGKRCAHVDDDGAPCTNGAQAPTDLCVGHGGGPRCVHVDDDG
APCTNGAKGGTDTCKAHGGGKRCLHVDGDGAPCTKSAQAPTDLCKIHGGG
PRCLHVDEDGTPCTKSAAGATDLCKAHGGG