Trimin1|144030|gw1.33.106.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|144030
Unique NameTrimin1|144030|gw1.33.106.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length78
Homology
BLAST of jgi.p|Trimin1|144030 vs. uniprot
Match: A0A835Z4W2_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4W2_9STRA)

HSP 1 Score: 176 bits (447), Expect = 1.960e-56
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0
Query:    1 WAEISKHLPGRDAKQCRERYINHLDPSLRKAPWTPEEEAALVAHCRETNCHWAEVWRRFPGRSYNDVKNRYYLLERRA 78
            WAEISKHLPGRDAKQCRERYINHLDPSLRKAPWTPEEEAALVAHCRETNCHWAEVWRRFPGRSYNDVKNRYYLLERRA
Sbjct:    1 WAEISKHLPGRDAKQCRERYINHLDPSLRKAPWTPEEEAALVAHCRETNCHWAEVWRRFPGRSYNDVKNRYYLLERRA 78          
BLAST of jgi.p|Trimin1|144030 vs. uniprot
Match: A0A836CND7_9STRA (Homeodomain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CND7_9STRA)

HSP 1 Score: 114 bits (286), Expect = 1.340e-30
Identity = 48/77 (62.34%), Postives = 60/77 (77.92%), Query Frame = 0
Query:    1 WAEISKHLPGRDAKQCRERYINHLDPSLRKAPWTPEEEAALVAHCRETNCHWAEVWRRFPGRSYNDVKNRYYLLERR 77
            WA +++ +PGR AKQCRERY+NHLDP L++ PWTPEEE  L+  C   N  WAE+ R+ PGRSYNDVKNRY L++RR
Sbjct:   42 WALVARSMPGRVAKQCRERYLNHLDPKLQRGPWTPEEEQVLLRLCEGQNRQWAEICRQLPGRSYNDVKNRYNLIQRR 118          
BLAST of jgi.p|Trimin1|144030 vs. uniprot
Match: A0A835YSH7_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSH7_9STRA)

HSP 1 Score: 106 bits (265), Expect = 1.000e-27
Identity = 46/77 (59.74%), Postives = 58/77 (75.32%), Query Frame = 0
Query:    1 WAEISKHLPGRDAKQCRERYINHLDPSLRKAPWTPEEEAALVAHCRETNCHWAEVWRRFPGRSYNDVKNRYYLLERR 77
            WA+I  H+PGR  KQCRERY+NHLDPSL+K PWTPEE+A L     + N  WA++ R+ PGR  NDVKNR+ L++RR
Sbjct:   78 WAQICMHMPGRVGKQCRERYLNHLDPSLKKTPWTPEEDALLTELHTKMNNSWADIARQMPGRCDNDVKNRWNLIQRR 154          
BLAST of jgi.p|Trimin1|144030 vs. uniprot
Match: A0A6H5JMK3_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMK3_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 1.180e-25
Identity = 48/78 (61.54%), Postives = 61/78 (78.21%), Query Frame = 0
Query:    1 WAEISKHLPGRDAKQCRERYINHLDPSLRK-APWTPEEEAALVAHCRETNCHWAEVWRRFPGRSYNDVKNRYYLLERR 77
            W++++KH+PGR AKQCRERY+NHLDPSLRK  PWT +EEA L+  C      WAE+ R+  GRSYNDVKNR+ L++RR
Sbjct: 1056 WSDLAKHIPGRIAKQCRERYLNHLDPSLRKDMPWTEDEEALLMRLCFAKQNQWAEICRQLHGRSYNDVKNRFNLIQRR 1133          
BLAST of jgi.p|Trimin1|144030 vs. uniprot
Match: D7FJZ9_ECTSI (Putative c-myb-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJZ9_ECTSI)

HSP 1 Score: 105 bits (262), Expect = 5.920e-25
Identity = 46/78 (58.97%), Postives = 61/78 (78.21%), Query Frame = 0
Query:    1 WAEISKHLPGRDAKQCRERYINHLDPSLRK-APWTPEEEAALVAHCRETNCHWAEVWRRFPGRSYNDVKNRYYLLERR 77
            W+++++H+PGR AKQCRERY+NHLDPSLRK  PWT +EEA L+  C      WAE+ R+  GRSYNDV+NR+ L++RR
Sbjct:  318 WSDLARHIPGRIAKQCRERYLNHLDPSLRKDMPWTEDEEALLMRLCFAKQNQWAEICRQLHGRSYNDVQNRFNLIQRR 395          
BLAST of jgi.p|Trimin1|144030 vs. uniprot
Match: D7G0Z5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z5_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 3.610e-24
Identity = 47/77 (61.04%), Postives = 57/77 (74.03%), Query Frame = 0
Query:    1 WAEISKHLPGRDAKQCRERYINHLDPSLRKAPWTPEEEAALVAHCRETNCHWAEVWRRFPGRSYNDVKNRYYLLERR 77
            W++IS H+PGR  KQCRERY+NHLDPSLR  PWT EEE  L++     N  WAE+ R+ PGRS NDVKNR+ L+ RR
Sbjct:  649 WSQISDHMPGRVGKQCRERYLNHLDPSLRHGPWTEEEERLLLSLHARLNNQWAEIARQIPGRSDNDVKNRWNLVCRR 725          
BLAST of jgi.p|Trimin1|144030 vs. uniprot
Match: A0A6H5L2W7_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2W7_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 3.630e-24
Identity = 47/77 (61.04%), Postives = 57/77 (74.03%), Query Frame = 0
Query:    1 WAEISKHLPGRDAKQCRERYINHLDPSLRKAPWTPEEEAALVAHCRETNCHWAEVWRRFPGRSYNDVKNRYYLLERR 77
            W++IS H+PGR  KQCRERY+NHLDPSLR  PWT EEE  L++     N  WAE+ R+ PGRS NDVKNR+ L+ RR
Sbjct: 1037 WSQISDHMPGRVGKQCRERYLNHLDPSLRHGPWTEEEERLLLSLHARLNNQWAEIARQIPGRSDNDVKNRWNLVCRR 1113          
BLAST of jgi.p|Trimin1|144030 vs. uniprot
Match: A0A836CML2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CML2_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 1.770e-23
Identity = 46/78 (58.97%), Postives = 53/78 (67.95%), Query Frame = 0
Query:    1 WAEISKHLPGRDAKQCRERYINHLDPSLRKAPWTPEEEAALVAHCRETNCHWAEVWRRFPGRSYNDVKNRYYLLERRA 78
            W +I+K LPGR AKQ R RY NHLDP L KAPWTPEE+  LV     T   WA + R  PGRS NDVKNR++ +ER A
Sbjct:   56 WKKIAKLLPGRSAKQARTRYTNHLDPRLTKAPWTPEEDQLLVETVEGTGAGWAVIARSMPGRSDNDVKNRWHTIERYA 133          
BLAST of jgi.p|Trimin1|144030 vs. uniprot
Match: A0A7S1G6Z8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G6Z8_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 2.330e-23
Identity = 40/78 (51.28%), Postives = 56/78 (71.79%), Query Frame = 0
Query:    1 WAEISKHLPGRDAKQCRERYINHLDPSLRKAPWTPEEEAALVAHCRETNCHWAEVWRRFPGRSYNDVKNRYYLLERRA 78
            W  ++  +PGR AKQCRER++N+LDP L+K PW+PEE+A LVA  +E   HW+E+ +  PGR  N VKNR+Y +  R+
Sbjct:  120 WGRVAASIPGRTAKQCRERWVNNLDPQLKKTPWSPEEDAILVAKQKEIGNHWSEIAQFLPGRPDNSVKNRWYCMINRS 197          
BLAST of jgi.p|Trimin1|144030 vs. uniprot
Match: A0A1E7EVM5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EVM5_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 2.910e-23
Identity = 40/72 (55.56%), Postives = 51/72 (70.83%), Query Frame = 0
Query:    1 WAEISKHLPGRDAKQCRERYINHLDPSLRKAPWTPEEEAALVAHCRETNCHWAEVWRRFPGRSYNDVKNRYY 72
            WA+I+ HLPGR  KQCRER++NHLDP L+K  WT +EEA L+A        WA + ++ PGRS NDVKN +Y
Sbjct:   54 WAKIAAHLPGRQGKQCRERFVNHLDPELKKGEWTDDEEAILIAMHELHGNRWANISKQLPGRSDNDVKNHWY 125          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|144030 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z4W2_9STRA1.960e-56100.00Homeodomain-like protein (Fragment) n=1 Tax=Tribon... [more]
A0A836CND7_9STRA1.340e-3062.34Homeodomain-like protein n=1 Tax=Tribonema minus T... [more]
A0A835YSH7_9STRA1.000e-2759.74Homeodomain-like protein (Fragment) n=1 Tax=Tribon... [more]
A0A6H5JMK3_9PHAE1.180e-2561.54MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FJZ9_ECTSI5.920e-2558.97Putative c-myb-like transcription factor n=1 Tax=E... [more]
D7G0Z5_ECTSI3.610e-2461.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2W7_9PHAE3.630e-2461.04MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A836CML2_9STRA1.770e-2358.97Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1G6Z8_9STRA2.330e-2351.28Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A1E7EVM5_9STRA2.910e-2355.56Uncharacterized protein (Fragment) n=1 Tax=Fragila... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 29..77
e-value: 2.2E-8
score: 43.8
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 1..24
score: 7.015297
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 25..71
score: 7.770103
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 32..74
e-value: 2.55866E-6
score: 38.3254
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 1..24
e-value: 1.27961E-5
score: 36.3994
NoneNo IPR availableGENE3D1.10.10.60coord: 1..29
e-value: 2.8E-11
score: 45.2
NoneNo IPR availablePFAMPF13921Myb_DNA-bind_6coord: 1..41
e-value: 1.3E-11
score: 44.5
NoneNo IPR availableGENE3D1.10.10.60coord: 32..78
e-value: 3.2E-11
score: 44.8
NoneNo IPR availablePANTHERPTHR45614MYB PROTEIN-RELATEDcoord: 1..76
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 29..78
score: 9.87442
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 1..28
score: 16.207584
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 3..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_33contigContig_33:1022011..1022244 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|144030mRNA_6022Tribonema minus UTEX_B_3156 mRNAContig_33 1022011..1022244 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|144030|gw1.33.106.1 ID=Trimin1|144030|gw1.33.106.1|Name=jgi.p|Trimin1|144030|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=78bp
WAEISKHLPGRDAKQCRERYINHLDPSLRKAPWTPEEEAALVAHCRETNC
HWAEVWRRFPGRSYNDVKNRYYLLERRA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeobox-like_sf