Trimin1|143971|gw1.9.187.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|143971
Unique NameTrimin1|143971|gw1.9.187.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length201
Homology
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BLAST of jgi.p|Trimin1|143971 vs. uniprot
Match: A0A835YJ99_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ99_9STRA)

HSP 1 Score: 386 bits (991), Expect = 2.020e-135
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0 
Query:    1 VLSGKYRGKAYDDSPASLPGVLQLWRFDQGGAEIAFHTGGSSAQGLTSAFRQFEDKVQLPIYIEIVDGAGGAVAAGAVAQKGMAVSMLSSGDWLRFTVDVSSDAVLIPTWQIATVPPAGTRSVNIRTKIVVDSGSEAKPCQLQGAGGLDLTTPGSAALASYVGGAITLAQGQKQVLTICMQDVTNFKIASITFNEVKTSVI 201
            VLSGKYRGKAYDDSPASLPGVLQLWRFDQGGAEIAFHTGGSSAQGLTSAFRQFEDKVQLPIYIEIVDGAGGAVAAGAVAQKGMAVSMLSSGDWLRFTVDVSSDAVLIPTWQIATVPPAGTRSVNIRTKIVVDSGSEAKPCQLQGAGGLDLTTPGSAALASYVGGAITLAQGQKQVLTICMQDVTNFKIASITFNEVKTSVI
Sbjct:    1 VLSGKYRGKAYDDSPASLPGVLQLWRFDQGGAEIAFHTGGSSAQGLTSAFRQFEDKVQLPIYIEIVDGAGGAVAAGAVAQKGMAVSMLSSGDWLRFTVDVSSDAVLIPTWQIATVPPAGTRSVNIRTKIVVDSGSEAKPCQLQGAGGLDLTTPGSAALASYVGGAITLAQGQKQVLTICMQDVTNFKIASITFNEVKTSVI 201
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|143971 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YJ99_9STRA2.020e-135100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.260coord: 5..196
e-value: 1.2E-8
score: 37.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_9contigContig_9:384471..385073 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|143971mRNA_3541Tribonema minus UTEX_B_3156 mRNAContig_9 384471..385073 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|143971|gw1.9.187.1 ID=Trimin1|143971|gw1.9.187.1|Name=jgi.p|Trimin1|143971|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=201bp
VLSGKYRGKAYDDSPASLPGVLQLWRFDQGGAEIAFHTGGSSAQGLTSAF
RQFEDKVQLPIYIEIVDGAGGAVAAGAVAQKGMAVSMLSSGDWLRFTVDV
SSDAVLIPTWQIATVPPAGTRSVNIRTKIVVDSGSEAKPCQLQGAGGLDL
TTPGSAALASYVGGAITLAQGQKQVLTICMQDVTNFKIASITFNEVKTSV
I
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