Trimin1|143512|gw1.46.92.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|143512
Unique Name	Trimin1\|143512\|gw1.46.92.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	283

Homology

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BLAST of jgi.p|Trimin1|143512 vs. uniprot
Match: A0A836CC28_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC28_9STRA)

HSP 1 Score: 124 bits (312), Expect = 2.060e-30
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0

Query:    1 CEVNGCTKQAVRRSGSTEFCVMHEGGDRCQHVDEGGNSCNACAKISNSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLTMDTSLAKHPKXXXXXXXXXXXXXXXXXXXXTDEGGNSCRSSAVASK 188
            CEVNGCTKQAVRRSGSTEFCVMHEGGDRCQHVDEGGNSCNACAKISNSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLTMDTSLAKHPKXXXXXXXXXXXXXXXXXXXXTDEGGNSCRSSAVASK
Sbjct:    1 CEVNGCTKQAVRRSGSTEFCVMHEGGDRCQHVDEGGNSCNACAKISNSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLTMDTSLAKHPKXXXXXXXXXXXXXXXXXXXXTDEGGNSCRSSAVASK 188

[Close]

BLAST of jgi.p|Trimin1|143512 vs. uniprot
Match: A0A836CIX9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIX9_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 4.040e-18
Identity = 39/41 (95.12%), Postives = 39/41 (95.12%), Query Frame = 0

Query:    1 CEVNGCTKQAVRRSGSTEFCVMHEGGDRCQHVDEGGNSCNA 41
            CEVNGCTKQAV RSGSTEFCVMH GGDRCQHVDEGGNSCNA
Sbjct:    1 CEVNGCTKQAVLRSGSTEFCVMHGGGDRCQHVDEGGNSCNA 41

[Close]

BLAST of jgi.p|Trimin1|143512 vs. uniprot
Match: A0A836CDE9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDE9_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 2.110e-10
Identity = 29/31 (93.55%), Postives = 29/31 (93.55%), Query Frame = 0

Query:    1 CEVNGCTKQAVRRSGSTEFCVMHEGGDRCQH 31
            CEVNGCTKQAV RSGSTEFCVMH GGDRCQH
Sbjct:    7 CEVNGCTKQAVLRSGSTEFCVMHGGGDRCQH 37

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|143512 vs. uniprot

BLAST of jgi.p|Trimin1|143512 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A836CC28_9STRA	2.060e-30	100.00	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A836CIX9_9STRA	4.040e-18	95.12	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A836CDE9_9STRA	2.110e-10	93.55	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31827	EMB\|CAB89363.1	coord: 154..283 coord: 47..140
None	No IPR available	PANTHER	PTHR31827	EMB\|CAB89363.1	coord: 107..175
None	No IPR available	PANTHER	PTHR31827:SF32	LORICRIN-LIKE	coord: 107..175
None	No IPR available	PANTHER	PTHR31827:SF32	LORICRIN-LIKE	coord: 154..283 coord: 47..140 coord: 1..105
None	No IPR available	PANTHER	PTHR31827	EMB\|CAB89363.1	coord: 1..105

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_46	contig	Contig_46:83226..84085 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|143512	mRNA_4557	Tribonema minus UTEX_B_3156	mRNA	Contig_46 83226..84085 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|143512|gw1.46.92.1 ID=Trimin1|143512|gw1.46.92.1|Name=jgi.p|Trimin1|143512|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=283bp
CEVNGCTKQAVRRSGSTEFCVMHEGGDRCQHVDEGGNSCNACAKISNSGN
GVVHMCIKHGGGNRCQHVDEEGNSCRASALTSRTGSGAVGMCIKHGGGDR
CQHVDEGGNSCRASAVTSKSESGAVGMCFKHGGGDRCQHTLTMDTSLAKH
PKSGSGTAGMCIKHGGGDRCHHTDEGGNSCRSSAVASKMGSGAIGMCVKH
GGGNRCQHVDEEDNSCRASAVTSKSGSGLVGMSRKHGGGDRCQHVDEDGI
YCGTSAEHSKTGTGVTGMCRTHGGGNRCQIHGC