Trimin1|143452|gw1.145.26.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|143452
Unique NameTrimin1|143452|gw1.145.26.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length192
Homology
BLAST of jgi.p|Trimin1|143452 vs. uniprot
Match: A0A835ZDJ6_9STRA (HECT domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDJ6_9STRA)

HSP 1 Score: 385 bits (989), Expect = 2.050e-135
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0
Query:    1 PVTAAPMVLQPVELADMVCGPPGDGSASDFNFRETFHITEDSDFQDVHELRDAFWEVVDTMMVQEKWGLLLFITGVRRLPPPKTELMAIELQYMPPEARAGSNRSASASDAAQSLLGRVPCAHTCDNVLEVPDYWTALVTEAGFDPKRGLPASAKLMGDLRQKLRKHLRDKLLLAIANAQGYGLDGISSSMG 192
            PVTAAPMVLQPVELADMVCGPPGDGSASDFNFRETFHITEDSDFQDVHELRDAFWEVVDTMMVQEKWGLLLFITGVRRLPPPKTELMAIELQYMPPEARAGSNRSASASDAAQSLLGRVPCAHTCDNVLEVPDYWTALVTEAGFDPKRGLPASAKLMGDLRQKLRKHLRDKLLLAIANAQGYGLDGISSSMG
Sbjct:    1 PVTAAPMVLQPVELADMVCGPPGDGSASDFNFRETFHITEDSDFQDVHELRDAFWEVVDTMMVQEKWGLLLFITGVRRLPPPKTELMAIELQYMPPEARAGSNRSASASDAAQSLLGRVPCAHTCDNVLEVPDYWTALVTEAGFDPKRGLPASAKLMGDLRQKLRKHLRDKLLLAIANAQGYGLDGISSSMG 192          
BLAST of jgi.p|Trimin1|143452 vs. uniprot
Match: A0A7S3Y0V5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0V5_HETAK)

HSP 1 Score: 103 bits (257), Expect = 6.080e-24
Identity = 65/165 (39.39%), Postives = 88/165 (53.33%), Query Frame = 0
Query:   29 DFNFRETFHITEDSDFQ-DVHELRDAFWEVVDTMMVQEKWGLLLFITGVRRLPPPKTELMAIELQYMPPEARAGSNRSASASDAAQSLLGRVPCAHTCDNVLEVPDYWTALVTEAGFDPKRGLPASAKLMGDLRQKLRKHLRDKLLLAIANAQGYGLDGISSSMG 192
            DF+ RE F +  D D +    EL  A WEV   +  + K  LL+F+TGV  LP P TE + IE  ++P              D  + +LG +P +HTCDN+LE+PDY  AL    G  P  G             +LR+ LR KLLLA+ N++GYGLD ++SS G
Sbjct:   62 DFDLREVFQVVVDRDLERGSPELVAALWEVAAALSPELKRQLLVFVTGVSTLPAPFTEFLTIEQPFVPLH-----------KDDYKKILGMLPQSHTCDNILELPDYAGALRALEGRPPSPG-------------RLRELLRGKLLLAVQNSEGYGLDEVTSSGG 202          
BLAST of jgi.p|Trimin1|143452 vs. uniprot
Match: A0A7S3ZUA9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZUA9_9STRA)

HSP 1 Score: 104 bits (259), Expect = 1.870e-22
Identity = 66/205 (32.20%), Postives = 101/205 (49.27%), Query Frame = 0
Query:   13 ELADMVCGPPGDGSASDFNFRETFHITEDSDFQDVHELRDAFWEVVD---------------------------TMMVQEKWGLLLFITGVRRLPPPKTELMAIELQYMPPEARAGSNRSASASDAAQSLLGRVPCAHTCDNVLEVPDYWTALV---TEAGFDPKRGLPASAKLMGDLRQKLRKHLRDKLLLAIANAQGYGLDGI 187
            +L  + CG P      DF FR+ F +  D++ +D   L DA W VVD                            +   ++  LL+F+TGV RLP    E + +EL ++P              D  + +L  VP +HTCDN+LE+P+YW AL+   T+    P+RG    ++    L ++LR+ +R+KLL+A+ NA GYGLD +
Sbjct: 1458 DLQRVACGAPE--VRGDFRFRDVFRVVMDAELRDCRPLHDALWAVVDGEDDALNDLELKKIDDLTGEEAPRRCEPLTPAQRRKLLVFVTGVSRLPARHAEFLTVELPFLP-----------FGVDEQRRMLAMVPQSHTCDNILELPNYWEALLKTKTDEARPPRRG----SRECNALERELRRIVREKLLVALDNAVGYGLDAL 1645          
BLAST of jgi.p|Trimin1|143452 vs. uniprot
Match: W2RG80_PHYPN (HECT domain-containing protein n=7 Tax=Phytophthora parasitica TaxID=4792 RepID=W2RG80_PHYPN)

HSP 1 Score: 103 bits (256), Expect = 4.550e-22
Identity = 65/176 (36.93%), Postives = 91/176 (51.70%), Query Frame = 0
Query:   13 ELADMVCGPPGDGSASDFNFRETFHITEDSDFQDVHELRDAFWEVVDTMMVQEKWGLLLFITGVRRLPPPKTELMAIELQYMPPEARAGSNRSASASDAAQSLLGRVPCAHTCDNVLEVPDYWTALVTEAGFDPKRGLPASAKLMGDLRQKLRKHLRDKLLLAIANAQGYGLDGIS 188
            +L + +CG  G G   DF   E F +  D+DF     L +AFW+ V++   Q K   + F+TGV  LP P TE + IE+ +           +A +SD  +     +P AHTCDN+LE+P+YW AL      D K     ++KL  +L   L K LRD    A+  + GYGLDG S
Sbjct: 1286 DLVESICGSNG-GPGDDFVINEVFRVAADTDFTGCRALMNAFWQTVNSFEPQLKRKFIKFVTGVDTLPLPGTEFLRIEMPF-----------TAISSDDHKKCAQMLPQAHTCDNMLELPNYWKALCWREKHDEKE---PNSKLEEELVLLLSKKLRD----AVEYSSGYGLDGTS 1442          
BLAST of jgi.p|Trimin1|143452 vs. uniprot
Match: A0A7S3FRM6_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3FRM6_9CHLO)

HSP 1 Score: 99.4 bits (246), Expect = 2.990e-21
Identity = 66/183 (36.07%), Postives = 98/183 (53.55%), Query Frame = 0
Query:   13 ELADMVCGPPGDG--SASDFNFRETFHITEDSDFQDVH-ELRDAFWEVVDTMMVQEKWGLLLFITGVRRLPPPKTELMAIELQYMPPEARAGSNRSASASDAAQSLLGRVPCAHTCDNVLEVPDYWTALVTEAGFDPKRGLPASAKLMGDLRQKLRKHLRDKLLLAIANAQGYGLDGISSSMG 192
            +L + VCG P +   S+   + R+ F +  D + +D   +L DA W+V+D   + +K     F+TG  RLP PKTE++ +EL +           + S  D A+ LLG +P AHTC+N+LE+P+YW +L+        RG  A      DL  +LR+ L D+L  A+AN   Y LD IS   G
Sbjct:  214 KLREAVCGEPAEERLSSKRVSLRDVFVVQCDEELRDSWPDLDDALWQVLDAWPLPKKLDFAKFVTGTDRLPLPKTEMIKVELPFF----------AFSDHDHAR-LLGTLPQAHTCENLLELPNYWESLLHV------RGQGAGGGARQDLLAELRRTLDDRLSFAVANCDTYALDTISHHAG 379          
BLAST of jgi.p|Trimin1|143452 vs. uniprot
Match: A0A6G0WMF8_9STRA (HECT domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WMF8_9STRA)

HSP 1 Score: 100 bits (249), Expect = 3.330e-21
Identity = 64/182 (35.16%), Postives = 95/182 (52.20%), Query Frame = 0
Query:    8 VLQPVELADMVCGPPGDGSASDFNFRETFHITEDSDFQDVHELRDAFWEVVDTMMVQEKWGLLLFITGVRRLPPPKTELMAIELQYMPPEARAGSNRSASASDAAQSLLGRVPCAHTCDNVLEVPDYWTALVTEAGFDPKRGLPASAKLMGDLRQKLRKHLRDKLLLAIANAQGYGLDGISS 189
            ++       +VCGP       DFN R+ F ++ D +F     L +A W ++D +   +K   + F+TGV +LP P TE++ IEL Y             SAS+ A+ LL  +P AHTCDNVLE+P+YWTAL  +     +   P    L+        + +++KL+ AI N   YGLD +SS
Sbjct:  352 MIMDYNFQSLVCGPV---PREDFNIRDIFLVSMDEEFTQCQYLHNAVWNILDNLSPSDKRRFVKFVTGVDKLPVPGTEILRIELPYT----------VISASERAKQLLV-LPQAHTCDNVLELPNYWTALCEKF----RDSSPTYDMLV--------QIVKEKLMYAIENGNNYGLDVVSS 507          
BLAST of jgi.p|Trimin1|143452 vs. uniprot
Match: A0A833WPR6_PHYIN (HECT domain-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WPR6_PHYIN)

HSP 1 Score: 99.4 bits (246), Expect = 9.880e-21
Identity = 63/181 (34.81%), Postives = 91/181 (50.28%), Query Frame = 0
Query:    9 LQPVELADMVCGPPGDGSASDFNFRETFHITEDSDFQDVHELRDAFWEVVDTMMVQEKWGLLLFITGVRRLPPPKTELMAIELQYMPPEARAGSNRSASASDAAQSLLGRVPCAHTCDNVLEVPDYWTALVTEAGFDPKRGLPASAKLMGDLRQKLRKHLRDKLLLAIANAQGYGLDGISS 189
            +   +L + +CG    G + DF   E F +  D+DF D   L + FW+ V+      K  L+ F+TGV  LP   TE + IE+ +           +A +SD  +  L  +P AHTCDN LE+P+YW AL      D      A++KL     +KL+  L  KL  A+  + GYGLDG S+
Sbjct: 1261 ISEADLVESICG-SSSGPSDDFFINEVFRVVADTDFTDCQPLMNVFWQTVNGFEPHLKRKLIKFVTGVDTLPLAGTEFLRIEMPF-----------TAISSDDHKKCLQMLPQAHTCDNTLELPNYWKALCWREQHDEHE---ANSKL----EEKLKLLLSKKLYDAVEYSSGYGLDGTSA 1422          
BLAST of jgi.p|Trimin1|143452 vs. uniprot
Match: A0A329SKM6_9STRA (HECT domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A329SKM6_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 9.900e-21
Identity = 63/180 (35.00%), Postives = 94/180 (52.22%), Query Frame = 0
Query:   13 ELADMVCGPPGDGSASDFNFRETFHITEDSDFQDVHELRDAFWEVVDTMMVQEKWGLLLFITGVRRLPPPKTELMAIELQYMPPEARAGSNRSASASDAAQSLLGRVPCAHTCDNVLEVPDYWTALVTEAGFDPKRGLPASAKLMGDLRQKLRKHLRDKLLLAIANAQGYGLDGISSSMG 192
            +L + +CG   DG   DF   E F +  D+DF +   L +AFW+ V+   +Q K   + F+TGV  LP   TE + IE+ +           +A +S+  +  L  +P AHTCDN+LE+P+YW AL      D      A++KL  +L   + K LRD    A+  + GYGLDG ++  G
Sbjct: 1288 DLVESICG-SSDGPGDDFIVNEVFRVAADTDFTNCLPLWNAFWQTVNGFELQLKRKFIRFVTGVDTLPLTGTEFLRIEMPF-----------TAISSEDHKKCLQMLPQAHTCDNMLELPNYWKALCWREQHDEHE---ANSKLEEELALLISKKLRD----AVEYSNGYGLDGTTAVAG 1448          
BLAST of jgi.p|Trimin1|143452 vs. uniprot
Match: A0A1V9YEH2_9STRA (HECT domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YEH2_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.300e-20
Identity = 61/173 (35.26%), Postives = 92/173 (53.18%), Query Frame = 0
Query:   13 ELADMVCGPPGDGSASDFNFRETFHITEDSDFQDVHELRDAFWEVVDTMMVQEKWGLLLFITGVRRLPPPKTELMAIELQYMPPEARAGSNRSASASDAAQSLLGRVPCAHTCDNVLEVPDYWTALVTEAGFDPKRGLPASAKLMGDLRQKLRKHLRDKLLLAIANAQGYGLD 185
            EL +++CGPP   ++ +F+ R+ F + ED        + DAFW VVD     EK  L+ F+TG+ +LP P+TE++ +++ +             + S   + +L R+P AHTC+N LE+P+Y+             GL AS     DL Q L   LR KLL A+A+  GY LD
Sbjct:  932 ELHELLCGPP---ASDNFDLRDVFKVVEDDALVGCRPMHDAFWRVVDEFSATEKRALIKFVTGIDKLPLPQTEILRLDMPW-----------PVATSHEKKLVLLRLPQAHTCENTLELPNYYG------------GLDAS----DDLPQALTVLLRTKLLYAMAHGLGYDLD 1074          
BLAST of jgi.p|Trimin1|143452 vs. uniprot
Match: R1CYP2_EMIHU (HECT domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CYP2_EMIHU)

HSP 1 Score: 96.3 bits (238), Expect = 1.030e-19
Identity = 59/182 (32.42%), Postives = 92/182 (50.55%), Query Frame = 0
Query:    9 LQPVELADMVCGPPGDGSASDFNFRETFHITEDSDFQDVHELRDAFWEVVDTMMVQEKWGLLLFITGVRRLPPPKTELMAIELQYMPPEARAGSNRSASASDAAQSLLGRVPCAHTCDNVLEVPDYWTALVTEAGFDPKRGLPASAKLMGDLRQKLRKHLRDKLLLAIANAQGYGLDGISSS 190
            + P +L  +VCG P    + D   R+ F + ED+       LR+A W V+D    +EK  LL F TG  R P P T +++++L + P   R          +AA +L+  +P AHTCDNVLE+P+Y+ AL    G +   G P+          +LR  + D+   A+++   YGLD +  +
Sbjct:  435 ISPTQLCAIVCGEP---ESHDRRLRDVFRVVEDAALAGCPPLREALWAVLDGWTEEEKRRLLAFCTGSDRWPQPGTAVLSVQLPFAPRGRR---------EEAAMALM--MPQAHTCDNVLELPNYYLALAASRGEEAGAGPPSPG-----FAAELRSLIHDRFSTAVSHCACYGLDDLGGA 597          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|143452 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZDJ6_9STRA2.050e-135100.00HECT domain-containing protein (Fragment) n=1 Tax=... [more]
A0A7S3Y0V5_HETAK6.080e-2439.39Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3ZUA9_9STRA1.870e-2232.20Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
W2RG80_PHYPN4.550e-2236.93HECT domain-containing protein n=7 Tax=Phytophthor... [more]
A0A7S3FRM6_9CHLO2.990e-2136.07Hypothetical protein (Fragment) n=1 Tax=Chloropico... [more]
A0A6G0WMF8_9STRA3.330e-2135.16HECT domain-containing protein n=1 Tax=Aphanomyces... [more]
A0A833WPR6_PHYIN9.880e-2134.81HECT domain-containing protein n=1 Tax=Phytophthor... [more]
A0A329SKM6_9STRA9.900e-2135.00HECT domain-containing protein n=3 Tax=Phytophthor... [more]
A0A1V9YEH2_9STRA1.300e-2035.26HECT domain-containing protein n=1 Tax=Achlya hypo... [more]
R1CYP2_EMIHU1.030e-1932.42HECT domain-containing protein n=2 Tax=Emiliania h... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000569HECT domainPFAMPF00632HECTcoord: 7..136
e-value: 1.4E-12
score: 47.7
IPR000569HECT domainPROSITEPS50237HECTcoord: 1..134
score: 17.258009
NoneNo IPR availableGENE3D3.30.2410.10Hect, E3 ligase catalytic domaincoord: 29..185
e-value: 1.7E-14
score: 56.0
NoneNo IPR availablePIRSRPIRSR001569-1PIRSR001569-1coord: 43..134
e-value: 8.5E-4
score: 15.9
IPR035983HECT, E3 ligase catalytic domainSUPERFAMILY56204Hect, E3 ligase catalytic domaincoord: 8..136

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_145contigContig_145:272670..274341 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|143452mRNA_15220Tribonema minus UTEX_B_3156 mRNAContig_145 272670..274341 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|143452|gw1.145.26.1 ID=Trimin1|143452|gw1.145.26.1|Name=jgi.p|Trimin1|143452|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=192bp
PVTAAPMVLQPVELADMVCGPPGDGSASDFNFRETFHITEDSDFQDVHEL
RDAFWEVVDTMMVQEKWGLLLFITGVRRLPPPKTELMAIELQYMPPEARA
GSNRSASASDAAQSLLGRVPCAHTCDNVLEVPDYWTALVTEAGFDPKRGL
PASAKLMGDLRQKLRKHLRDKLLLAIANAQGYGLDGISSSMG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000569HECT_dom
IPR035983Hect_E3_ubiquitin_ligase