Trimin1|142495|gw1.20.136.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|142495
Unique NameTrimin1|142495|gw1.20.136.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length156
Homology
BLAST of jgi.p|Trimin1|142495 vs. uniprot
Match: A0A835Z4B7_9STRA (Armadillo-type protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4B7_9STRA)

HSP 1 Score: 298 bits (763), Expect = 3.880e-102
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0
Query:    1 QSTQAPTNEIRKEAEASLRACEASAGFSDALLAIVSSDAPSAVRLVAVILLKGLVRGSWKATRGAAARVLSSEEKQRVREFLLGPVPRQEGDNGVAVQLAVLSSKVARHDWPREWPDLFPALLNIVLTPRPPDGGLEQRRALFVIHHVLKELETKR 156
            QSTQAPTNEIRKEAEASLRACEASAGFSDALLAIVSSDAPSAVRLVAVILLKGLVRGSWKATRGAAARVLSSEEKQRVREFLLGPVPRQEGDNGVAVQLAVLSSKVARHDWPREWPDLFPALLNIVLTPRPPDGGLEQRRALFVIHHVLKELETKR
Sbjct:    1 QSTQAPTNEIRKEAEASLRACEASAGFSDALLAIVSSDAPSAVRLVAVILLKGLVRGSWKATRGAAARVLSSEEKQRVREFLLGPVPRQEGDNGVAVQLAVLSSKVARHDWPREWPDLFPALLNIVLTPRPPDGGLEQRRALFVIHHVLKELETKR 156          
BLAST of jgi.p|Trimin1|142495 vs. uniprot
Match: D7G019_ECTSI (Similar to importin 11 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G019_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 3.870e-23
Identity = 69/156 (44.23%), Postives = 91/156 (58.33%), Query Frame = 0
Query:    2 STQAPTNEIRKEAEASLRACEASAGFSDALLAIVSSDA-PSAVRLVAVILLKGLVRGSWKATRGAAARVLSSEEKQRVREFLLGPVPRQEGDNGVAVQLAVLSSKVARHDWPREWPDLFPALLNIVLTPRPPDGGLEQRRALFVIHHVLKELETKR 156
            STQ+P  E+RK AE  L+ACE   G++  L AI ++ A P+  R  AVILLK +VR  W+ +RG    V+   EK  +RE L G    +E +  V  QLAVL  K+AR DWP +WP LFP L+  +L+  P      QR +L   + VLKEL  KR
Sbjct:   25 STQSPVPEVRKPAEQLLKACEELPGYTSVLAAIATTHAAPTDARATAVILLKNMVRVRWR-SRGGRGAVVGDGEKAALREVLAG-AGMEEPEERVVSQLAVLMGKIARVDWPGQWPQLFPNLVASLLSGSP----RRQRMSLCGTNEVLKELSMKR 174          
BLAST of jgi.p|Trimin1|142495 vs. uniprot
Match: A8IAG8_CHLRE (Predicted protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8IAG8_CHLRE)

HSP 1 Score: 96.3 bits (238), Expect = 3.440e-20
Identity = 62/151 (41.06%), Postives = 93/151 (61.59%), Query Frame = 0
Query:    9 EIRKEAEASLRACEASAGFSDALLAIVSS-DAPSAVRLVAVILLKGLVRGSWKATRGAAARVLSSEEKQRVREFLLGPVPRQEGDNGVAVQLAVLSSKVARHDWPREWPDLFPALLNIVLTPRPPDGG--LEQRRALFVIHHVLKELETKR 156
            E++K+AEA +++ ++ AGFS AL  IV + +A  + R +A + LK  +  +WK   G +  + S EEK  +R  L G +P+   DN +AVQ+A++ +KVAR D+P +WP LF  LL  V      +GG  L  RR   ++HHVLKEL +KR
Sbjct:   26 EVQKQAEAYIQSLDSRAGFSSALAEIVGNREADHSARYLASVHLKNSIHRNWKKRVGTSTGI-SPEEKAHLRSRLSGLIPQD--DNQIAVQVALVYAKVARFDYPADWPGLFADLLANV------NGGSALTVRRVYLILHHVLKELSSKR 167          
BLAST of jgi.p|Trimin1|142495 vs. uniprot
Match: A0A061SEL5_9CHLO (Importin beta-2 subunit family protein (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SEL5_9CHLO)

HSP 1 Score: 93.2 bits (230), Expect = 4.770e-20
Identity = 65/149 (43.62%), Postives = 87/149 (58.39%), Query Frame = 0
Query:   11 RKEAEASLRACEASAGFSDALLAIVSS-DAPSAVRLVAVILLKGLVRGSWKATRGAAARVLSSEEKQRVREFLLGPVPRQEGDNGVAVQLAVLSSKVARHDWPREWPDLFPALLNIVLTPRPPDGG--LEQRRALFVIHHVLKELETKR 156
            RK AE ++   E   GF   LL IVS+ +A  +VR +A + LK  +   W+  R      +S EEKQ +R  LL  +   E +N +A Q+AV+ SK+ARHD+PREWP LF  LLN V       GG  L QRR   V+H++LKEL +KR
Sbjct:   35 RKLAEKTIAQLEWCPGFCSRLLEIVSAKNAEHSVRWLASLQLKNTISWLWRPRRNTGG--MSVEEKQHIRVQLLNCLA--EENNQIATQIAVVFSKIARHDYPREWPSLFSDLLNGV------QGGNLLLQRRIYLVLHYILKELSSKR 173          
BLAST of jgi.p|Trimin1|142495 vs. uniprot
Match: A0A835WH05_9CHLO (Importin N-terminal domain-containing protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A835WH05_9CHLO)

HSP 1 Score: 95.9 bits (237), Expect = 4.790e-20
Identity = 62/151 (41.06%), Postives = 93/151 (61.59%), Query Frame = 0
Query:    9 EIRKEAEASLRACEASAGFSDALLAIVSS-DAPSAVRLVAVILLKGLVRGSWKATRGAAARVLSSEEKQRVREFLLGPVPRQEGDNGVAVQLAVLSSKVARHDWPREWPDLFPALLNIVLTPRPPDGG--LEQRRALFVIHHVLKELETKR 156
            E++K+AEA +++ ++ AGFS AL  IV + +A  + R +A + LK  +  +WK   GA+  +   EEK  +R  L   +P++  DN +AVQ+A++ +KVAR D+P EWP LF  LL  V      +GG  L  RR   ++HHVLKEL +KR
Sbjct:   26 EVQKQAEAYIQSLDSRAGFSSALAEIVGNREADHSARYLASVHLKNSIHRNWKKRVGASTGI-GPEEKAHLRSRLSSLIPQE--DNQIAVQVALVYAKVARFDYPAEWPGLFSDLLANV------NGGSALTVRRVYLILHHVLKELSSKR 167          
BLAST of jgi.p|Trimin1|142495 vs. uniprot
Match: A0A067CRD5_SAPPC (Importin N-terminal domain-containing protein (Fragment) n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CRD5_SAPPC)

HSP 1 Score: 94.4 bits (233), Expect = 1.620e-19
Identity = 61/151 (40.40%), Postives = 88/151 (58.28%), Query Frame = 0
Query:    6 PTNEIRKEAEASLRACEASAGFSDALLAIVSSDAPSAVRLVAVILLKGLVRGSWKATRGAAARVLSSEEKQRVREFLLGPVPRQEGDNGVAVQLAVLSSKVARHDWPREWPDLFPALLNIVLTPRPPDGGLEQRRALFVIHHVLKELETKR 156
            P  E+R   EA+L+ C    GF+   L ++      A RL+A + LK  V  SW  TRG+   ++S+EEK +VR  LL     +E +  VA QLAV  +++AR D+P+EWPDLF  L +++    P    L+Q RAL V+  V+KEL T+R
Sbjct:   25 PYEEVRVAGEATLQQCMKLPGFACLCLEVLKQPVGDATRLMAALSLKNAVASSW-ITRGSRQFMISAEEKLQVRRGLLQHT--EETNKAVATQLAVTIARIARSDFPKEWPDLFGILRDLIQQGSP----LQQMRALRVLKSVVKELATRR 168          
BLAST of jgi.p|Trimin1|142495 vs. uniprot
Match: UPI000873A512 (importin-11 n=1 Tax=Anoplophora glabripennis TaxID=217634 RepID=UPI000873A512)

HSP 1 Score: 93.6 bits (231), Expect = 3.010e-19
Identity = 64/146 (43.84%), Postives = 81/146 (55.48%), Query Frame = 0
Query:   12 KEAEASLRACEASAGFSDALLAIVSSDAPSA-VRLVAVILLKGLVRGSWKATRGAAARVLSSEEKQRVREFLLGPVPRQEGDNGVAVQLAVLSSKVARHDWPREWPDLFPALLNIVLTPRPPDGGLEQRRALFVIHHVLKELETKR 156
            K AE  LR  E   GF   L  I+S+ +    VR +AV+ +K  +   W   R  A   +S EEK  +R  LL      E  + +AVQ AVL SKVAR DWPREWP+LFP LL  V +P     GL Q RAL  +HHV+K + +KR
Sbjct:   26 KPAEGKLREWETQPGFYTVLFNIISNHSMDVNVRWMAVLYMKNGIDKYW---RKNAPNAISEEEKLNIRHGLLCNF--SEPISQIAVQRAVLVSKVARFDWPREWPNLFPTLLQAVESP----DGLVQHRALLTLHHVVKAIASKR 162          
BLAST of jgi.p|Trimin1|142495 vs. uniprot
Match: A0A8J4B300_9CHLO (Importin N-terminal domain-containing protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4B300_9CHLO)

HSP 1 Score: 93.6 bits (231), Expect = 3.060e-19
Identity = 60/149 (40.27%), Postives = 91/149 (61.07%), Query Frame = 0
Query:    9 EIRKEAEASLRACEASAGFSDALLAIVSS-DAPSAVRLVAVILLKGLVRGSWKATRGAAARVLSSEEKQRVREFLLGPVPRQEGDNGVAVQLAVLSSKVARHDWPREWPDLFPALLNIVLTPRPPDGGLEQRRALFVIHHVLKELETKR 156
            E++K+AEA +++ ++  GFS AL  IVS+ DA  + R +A + LK  +  +WK     AA  +S EEK  +R  L   +P+   DN +AVQ+A++ +K+AR D+P EWP LF  L+  + +  P    L  RR   ++HHVLKEL +KR
Sbjct:   26 EVQKQAEAYIQSLDSRPGFSSALAEIVSTRDADHSARYLASVHLKNSIHRNWKKRISHAA--ISPEEKAHLRAKLSQLIPQD--DNQIAVQVALVYAKIARFDYPSEWPGLFSDLMRNLGSGNP----LSVRRVYLILHHVLKELSSKR 166          
BLAST of jgi.p|Trimin1|142495 vs. uniprot
Match: A0A1V9YZ41_9STRA (Importin-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YZ41_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 4.100e-19
Identity = 61/151 (40.40%), Postives = 89/151 (58.94%), Query Frame = 0
Query:    6 PTNEIRKEAEASLRACEASAGFSDALLAIVSSDAPSAVRLVAVILLKGLVRGSWKATRGAAARVLSSEEKQRVREFLLGPVPRQEGDNGVAVQLAVLSSKVARHDWPREWPDLFPALLNIVLTPRPPDGGLEQRRALFVIHHVLKELETKR 156
            P  E+R   EA+L+ C    GF+   + ++      A RL+A + LK  V  SW   RG+    +S++EK +VR  LL  +  +E +  VA QLAV  +++ARHD+P+EWPDLF AL +I+    P    L+Q RAL V+  V+KEL T+R
Sbjct:   25 PYPEVRVGGEATLQQCMKLPGFACLCMELLQQPLADATRLMAALSLKNAVTNSW-VVRGSRQFSISADEKVQVRLRLLQHM--EEPNKAVATQLAVTVARIARHDFPKEWPDLFGALRDIIQQGSP----LQQARALRVLKAVVKELATRR 168          
BLAST of jgi.p|Trimin1|142495 vs. uniprot
Match: A0A653D6I5_CALMS (Importin N-terminal domain-containing protein n=2 Tax=Callosobruchus maculatus TaxID=64391 RepID=A0A653D6I5_CALMS)

HSP 1 Score: 92.4 bits (228), Expect = 7.600e-19
Identity = 62/148 (41.89%), Postives = 83/148 (56.08%), Query Frame = 0
Query:   10 IRKEAEASLRACEASAGFSDALLAIVSSDAPSA-VRLVAVILLKGLVRGSWKATRGAAARVLSSEEKQRVREFLLGPVPRQEGDNGVAVQLAVLSSKVARHDWPREWPDLFPALLNIVLTPRPPDGGLEQRRALFVIHHVLKELETKR 156
            + K AE  LR  E   GF   LL ++S       VR +AV+ LK  V   W   R  A   +S +EK  +R+ LL     +E  N +AVQ AVL SKVAR DWPREWP++FP LL  + +P     G+ Q R+L  +HHV+K + +KR
Sbjct:   22 VLKPAETKLREWETQPGFYAVLLNVLSDFTMDVNVRFMAVLCLKNGVDRYW---RKNAPNAISEQEKSTIRQGLLCNF--EEPVNQIAVQRAVLISKVARLDWPREWPNVFPVLLQGIESP----NGMVQHRSLLTLHHVVKAVSSKR 160          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|142495 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z4B7_9STRA3.880e-102100.00Armadillo-type protein (Fragment) n=1 Tax=Tribonem... [more]
D7G019_ECTSI3.870e-2344.23Similar to importin 11 n=1 Tax=Ectocarpus siliculo... [more]
A8IAG8_CHLRE3.440e-2041.06Predicted protein n=1 Tax=Chlamydomonas reinhardti... [more]
A0A061SEL5_9CHLO4.770e-2043.62Importin beta-2 subunit family protein (Fragment) ... [more]
A0A835WH05_9CHLO4.790e-2041.06Importin N-terminal domain-containing protein n=3 ... [more]
A0A067CRD5_SAPPC1.620e-1940.40Importin N-terminal domain-containing protein (Fra... [more]
UPI000873A5123.010e-1943.84importin-11 n=1 Tax=Anoplophora glabripennis TaxID... [more]
A0A8J4B300_9CHLO3.060e-1940.27Importin N-terminal domain-containing protein n=1 ... [more]
A0A1V9YZ41_9STRA4.100e-1940.40Importin-like protein n=1 Tax=Achlya hypogyna TaxI... [more]
A0A653D6I5_CALMS7.600e-1941.89Importin N-terminal domain-containing protein n=2 ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001494Importin-beta, N-terminal domainPFAMPF03810IBN_Ncoord: 14..83
e-value: 1.6E-9
score: 37.6
IPR001494Importin-beta, N-terminal domainPROSITEPS50166IMPORTIN_B_NTcoord: 14..83
score: 15.004128
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..156
e-value: 2.2E-35
score: 124.0
NoneNo IPR availablePANTHERPTHR10997:SF7IMPORTIN-11coord: 4..156
NoneNo IPR availablePANTHERPTHR10997IMPORTIN-7, 8, 11coord: 4..156
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 5..153

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_20contigContig_20:1279709..1282065 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|142495mRNA_4208Tribonema minus UTEX_B_3156 mRNAContig_20 1279709..1282065 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|142495|gw1.20.136.1 ID=Trimin1|142495|gw1.20.136.1|Name=jgi.p|Trimin1|142495|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=156bp
QSTQAPTNEIRKEAEASLRACEASAGFSDALLAIVSSDAPSAVRLVAVIL
LKGLVRGSWKATRGAAARVLSSEEKQRVREFLLGPVPRQEGDNGVAVQLA
VLSSKVARHDWPREWPDLFPALLNIVLTPRPPDGGLEQRRALFVIHHVLK
ELETKR
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001494Importin-beta_N
IPR011989ARM-like
IPR016024ARM-type_fold