Trimin1|142336|gw1.15.183.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|142336
Unique NameTrimin1|142336|gw1.15.183.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length244
Homology
BLAST of jgi.p|Trimin1|142336 vs. uniprot
Match: A0A835ZB36_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB36_9STRA)

HSP 1 Score: 388 bits (997), Expect = 6.410e-135
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 0
Query:    1 RRVWTKEEDEAIRGLVLQYGTRSWSVIADHIAKDFSIQGRSGKQCRERWHNHLDPHINKNAWTEEEERIMSEAHRQLGNRXXXXXXXXXXXXXXXXXXXXXSFMRRNVRRLNREVNEGPGGGARLLEDGSGGAAHVTLSPMDXXXXXXXXXXXXXXXXXXXXRKAANLAELNRYFNAATEAAKSALDSGALAPELADISKLAAAAEGGPLDLPLPLTSLHFAKGTPGFRDKLKRKLEETGGMQC 244
            RRVWTKEEDEAIRGLVLQYGTRSWSVIADHIAKDFSIQGRSGKQCRERWHNHLDPHINKNAWTEEEERIMSEAHRQLGNRXXXXXXXXXXXXXXXXXXXXXSFMRRNVRRLNREVNEGPGGGARLLEDGSGGAAHVTLSPMDXXXXXXXXXXXXXXXXXXXXRKAANLAELNRYFNAATEAAKSALDSGALAPELADISKLAAAAEGGPLDLPLPLTSLHFAKGTPGFRDKLKRKLEETGGMQC
Sbjct:    1 RRVWTKEEDEAIRGLVLQYGTRSWSVIADHIAKDFSIQGRSGKQCRERWHNHLDPHINKNAWTEEEERIMSEAHRQLGNRXXXXXXXXXXXXXXXXXXXXXSFMRRNVRRLNREVNEGPGGGARLLEDGSGGAAHVTLSPMDXXXXXXXXXXXXXXXXXXXXRKAANLAELNRYFNAATEAAKSALDSGALAPELADISKLAAAAEGGPLDLPLPLTSLHFAKGTPGFRDKLKRKLEETGGMQC 244          
BLAST of jgi.p|Trimin1|142336 vs. uniprot
Match: F0YL28_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL28_AURAN)

HSP 1 Score: 177 bits (448), Expect = 4.040e-52
Identity = 107/214 (50.00%), Postives = 124/214 (57.94%), Query Frame = 0
Query:    1 RRVWTKEEDEAIRGLVLQYGTRSWSVIADHIAKDFSIQGRSGKQCRERWHNHLDPHINKNAWTEEEERIMSEAHRQLG-NRXXXXXXXXXXXXXXXXXXXXXSFMRRNVRRLNREVNEGPGGGARLLEDGSGGAAHVTLSPMDXXXXXXXXXXXXXXXXXXXXRKAANLAELNRYFNAATEAAKSALDSGALAPELADISKLAAAAEGGPLDLP 213
            RRVWT +ED AIR LV++YGTRSWSVIA+HI +DF+I GR+GKQCRERWHNHLDPHINK AWTEEEERIM++AH+ LG N+                     SFMRRNVRRLNREVN+G      +      G       P D                    RKAANLAEL RYF AA EAA   L     +    D++K+A   E  PLD P
Sbjct:    7 RRVWTVQEDNAIRQLVMKYGTRSWSVIAEHIVQDFNIDGRTGKQCRERWHNHLDPHINKEAWTEEEERIMADAHKTLGCNKWSEIAKLLPGRTDNHVKNHWYSFMRRNVRRLNREVNDGQPNHQHV------GIVAKQARPSDSFQAPPKRGRS---------RKAANLAELQRYFTAAAEAASEVLHEDTSSDNREDLAKIAEV-EIKPLDSP 204          
BLAST of jgi.p|Trimin1|142336 vs. uniprot
Match: A0A7S1XJ32_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJ32_9STRA)

HSP 1 Score: 174 bits (441), Expect = 2.950e-50
Identity = 102/188 (54.26%), Postives = 114/188 (60.64%), Query Frame = 0
Query:    1 RRVWTKEEDEAIRGLVLQYGTRSWSVIADHIAKDFSIQGRSGKQCRERWHNHLDPHINKNAWTEEEERIMSEAHRQLGNRXXXXXXXXXXXXXXXXXXXXXSFMRRNVRRLNREVNEG-PGGGARLLEDGSGGAAHVTLSPMDXXXXXXXXXXXXXXXXXXXXRKAANLAELNRYFNAATEAAKSALD 187
            RRVWTKEED AIR LV ++GTRSWSVIA+ I  DF+I GR+GKQCRERWHNHLDP INK AWT EEE+IM EAH++LGN+                     SFMRRNVRRLNREV+EG PG    L     GGA     S  +                    RKAANLAEL RYF AA EAAK  L+
Sbjct:   53 RRVWTKEEDHAIRELVAKHGTRSWSVIAERIVTDFNITGRTGKQCRERWHNHLDPTINKGAWTPEEEQIMVEAHKELGNKWSEIAKRLPGRTDNHVKNHWYSFMRRNVRRLNREVSEGIPGLDPSLAP---GGARPKNGSGKNGAAVGPDGKPEEKPKKGRSSRKAANLAELQRYFTAAIEAAKEVLE 237          
BLAST of jgi.p|Trimin1|142336 vs. uniprot
Match: F0YL55_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL55_AURAN)

HSP 1 Score: 159 bits (401), Expect = 5.510e-46
Identity = 72/118 (61.02%), Postives = 91/118 (77.12%), Query Frame = 0
Query:    1 RRVWTKEEDEAIRGLVLQYGTRSWSVIADHIAKDFSIQGRSGKQCRERWHNHLDPHINKNAWTEEEERIMSEAHRQLGNRXXXXXXXXXXXXXXXXXXXXXSFMRRNVRRLNREVNEG 118
            RRVW+++ED AI+ LV++YGTRSWSVIA+HI  D++I+GR+GKQCRERWHNHLDPHINK+AWT +EER+M++AH+ LGN+                     SFMRRNVRRLNREVN+G
Sbjct:    6 RRVWSQQEDSAIKDLVMRYGTRSWSVIAEHIVSDYNIEGRTGKQCRERWHNHLDPHINKDAWTADEERVMADAHKSLGNKWSEIAKLLPGRTDNHVKNHWYSFMRRNVRRLNREVNDG 123          
BLAST of jgi.p|Trimin1|142336 vs. uniprot
Match: W7T303_9STRA (Myb-like dna-binding domain containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T303_9STRA)

HSP 1 Score: 153 bits (386), Expect = 8.870e-39
Identity = 98/119 (82.35%), Postives = 108/119 (90.76%), Query Frame = 0
Query:    1 RRVWTKEEDEAIRGLVLQYGTRSWSVIADHIAKD--FSIQGRSGKQCRERWHNHLDPHINKNAWTEEEERIMSEAHRQLGNRXXXXXXXXXXXXXXXXXXXXXSFMRRNVRRLNREVNE 117
            RRVW+K+ED++IR LV  +GTRSWSVIA+ IA D   SI GR+GKQCRERWHNHLDP+INKNAWTEEEERIMSEAHR+LGN+XXXXXXXXXXXXXXXXXXXX SFMRRNVRRLNREV E
Sbjct:   90 RRVWSKDEDDSIRNLVAAHGTRSWSVIAEKIASDKTLSITGRTGKQCRERWHNHLDPNINKNAWTEEEERIMSEAHRELGNKXXXXXXXXXXXXXXXXXXXXYSFMRRNVRRLNREVAE 208          
BLAST of jgi.p|Trimin1|142336 vs. uniprot
Match: D7G1V7_ECTSI (Myb-like DNA-binding domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1V7_ECTSI)

HSP 1 Score: 127 bits (320), Expect = 8.530e-31
Identity = 62/119 (52.10%), Postives = 79/119 (66.39%), Query Frame = 0
Query:    1 RRVWTKEEDEAIRGLVLQYGTRSWSVIADHIAKDFSIQGRSGKQCRERWHNHLDPHINKNAWTEEEERIMSEAHRQLGNRXXXXXXXXXXXXXXXXXXXXXSFMRRNVRRLNREVNEGP 119
            RRVW++EED+AIR LV ++GTRSW+ I +H+A D+SI GRSGKQCRERWHNHLDP I K  WT EEE ++++   ++GNR                     S MRRNVR L+REV+  P
Sbjct:   17 RRVWSREEDDAIRVLVKRHGTRSWATIEEHLAADYSIVGRSGKQCRERWHNHLDPSIKKGTWTPEEEALITKTRAEIGNRWSEIAKRLPGRTDNQVKNFWYSSMRRNVRTLSREVSGPP 135          
BLAST of jgi.p|Trimin1|142336 vs. uniprot
Match: A0A2R5FYY8_9STRA (Transcription factor MYB118 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FYY8_9STRA)

HSP 1 Score: 125 bits (313), Expect = 4.480e-29
Identity = 61/118 (51.69%), Postives = 77/118 (65.25%), Query Frame = 0
Query:    1 RRVWTKEEDEAIRGLVLQYGTRSWSVIADHIAKDFSIQGRSGKQCRERWHNHLDPHINKNAWTEEEERIMSEAHRQLGNRXXXXXXXXXXXXXXXXXXXXXSFMRRNVRRLNREVNEG 118
            RR W++ ED+AIR LV ++GT+ WS IA  +  D+ I  R+GKQCRERWHNHLDP I K+ WT EEE IM++AH++LGNR                     S MRRNVRRLN+EV +G
Sbjct:   14 RRAWSQREDDAIRTLVKEHGTKRWSTIATRLISDYRIDCRTGKQCRERWHNHLDPTIRKDPWTAEEEAIMAKAHQRLGNRWSEISKLLPGRTDNAIKNHWYSMMRRNVRRLNKEVLDG 131          
BLAST of jgi.p|Trimin1|142336 vs. uniprot
Match: A0A7S2SND5_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SND5_9STRA)

HSP 1 Score: 121 bits (304), Expect = 3.700e-28
Identity = 97/264 (36.74%), Postives = 128/264 (48.48%), Query Frame = 0
Query:    1 RRVWTKEEDEAIRGLVLQYGTRSWSVIADHIAKDFSIQGRSGKQCRERWHNHLDPHINKNAWTEEEERIMSEAHRQLGNRXXXXXXXXXXXXXXXXXXXXXSFMRRNVRRLNREV----NEGPGGGARLLEDGSGGAAH---------VT-----------LSPMDXXXXXXXXXXXXXXXXXXXXRKAANLAELNRYFNAATEAAKSAL-DSGALAPE-LADISKLAAAAEGGPLDLPLPLTSLHFAKGTPGFRDKLKRKLEE 238
            RRVW+ EEDEAIR LV + GT+ WS IA  + + ++I GR+GKQCRERWHNHLDP I K  W+E EE+ ++EAH++LGNR                     S MRRNVRRL +EV    +  PG      +D  GG            VT           +SP D                    RKAA+LAEL  Y     EAA   + +  A  P+ + ++  LA A +   +D P  L +      +  FR+KL+ KL E
Sbjct:   43 RRVWSNEEDEAIRTLVGEQGTKKWSWIATELRQRYNIDGRTGKQCRERWHNHLDPEIKKCPWSESEEQALAEAHQKLGNRWSEISKLLPGRTDNAIKNHWYSTMRRNVRRLTKEVWSHRDMTPG------DDTQGGKKRRKKRCKDELVTPHNYKPVKKRKISP-DEAFVKKVAHKGKKMKKERVGRKAASLAELQDYVKTTAEAAAEVMAEMNAGQPDDIENVELLAKAGDEAVVD-PTGLAA-KVLSNSQEFREKLRLKLVE 297          
BLAST of jgi.p|Trimin1|142336 vs. uniprot
Match: A0A0V0Q997_PSEPJ (Homeodomain protein n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0Q997_PSEPJ)

HSP 1 Score: 119 bits (299), Expect = 3.740e-27
Identity = 54/113 (47.79%), Postives = 76/113 (67.26%), Query Frame = 0
Query:    1 RRVWTKEEDEAIRGLVLQYGTRSWSVIADHIAKDFSIQGRSGKQCRERWHNHLDPHINKNAWTEEEERIMSEAHRQLGNRXXXXXXXXXXXXXXXXXXXXXSFMRRNVRRLNR 113
            RR WT EED+AI  LV +YG + W+++A  + +D++++ RSGKQCRERWHNHLDP INK+ WTEEEE+++ EAHRQ GN+                     S +RR++RR+N+
Sbjct:    9 RRAWTSEEDKAIIELVQKYGIKKWTIVAKKMQEDYNLKDRSGKQCRERWHNHLDPSINKSEWTEEEEKVIFEAHRQFGNKWAEIAKLLPGRTDNSIKNHFYSTLRRSLRRINK 121          
BLAST of jgi.p|Trimin1|142336 vs. uniprot
Match: G0QWF7_ICHMG (Myb protein, putative (Fragment) n=1 Tax=Ichthyophthirius multifiliis (strain G5) TaxID=857967 RepID=G0QWF7_ICHMG)

HSP 1 Score: 110 bits (275), Expect = 1.350e-26
Identity = 52/117 (44.44%), Postives = 74/117 (63.25%), Query Frame = 0
Query:    1 RRVWTKEEDEAIRGLVLQYGTRSWSVIADHIAKDFSIQGRSGKQCRERWHNHLDPHINKNAWTEEEERIMSEAHRQLGNRXXXXXXXXXXXXXXXXXXXXXSFMRRNVRRLNREVNE 117
            RR W  +ED+ I+ LV  YG + W+VIA  + + +S++GRSGKQCRERWHNHLDP INK  WT +EE+I+ EAH+Q GN+                     S +RR++RR+N+ + +
Sbjct:    4 RRSWDNQEDKVIKELVALYGVKKWTVIAQKMEQIYSLKGRSGKQCRERWHNHLDPGINKLPWTNKEEKIIFEAHKQYGNKWAEIAKYLPGRTDNSIKNHFYSKLRRSLRRINKLLGD 120          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|142336 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZB36_9STRA6.410e-135100.00Homeodomain-like protein (Fragment) n=1 Tax=Tribon... [more]
F0YL28_AURAN4.040e-5250.00Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S1XJ32_9STRA2.950e-5054.26Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
F0YL55_AURAN5.510e-4661.02Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
W7T303_9STRA8.870e-3982.35Myb-like dna-binding domain containing protein n=2... [more]
D7G1V7_ECTSI8.530e-3152.10Myb-like DNA-binding domain containing protein n=1... [more]
A0A2R5FYY8_9STRA4.480e-2951.69Transcription factor MYB118 n=1 Tax=Hondaea fermen... [more]
A0A7S2SND5_9STRA3.700e-2836.74Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A0V0Q997_PSEPJ3.740e-2747.79Homeodomain protein n=1 Tax=Pseudocohnilembus pers... [more]
G0QWF7_ICHMG1.350e-2644.44Myb protein, putative (Fragment) n=1 Tax=Ichthyoph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 58..106
e-value: 5.0E-15
score: 65.9
coord: 1..55
e-value: 9.7E-12
score: 55.0
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 1..53
score: 11.857669
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 54..104
score: 11.462847
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 61..104
e-value: 1.67983E-12
score: 58.3558
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 4..53
e-value: 2.66699E-12
score: 57.9706
NoneNo IPR availableGENE3D1.10.10.60coord: 1..58
e-value: 4.3E-20
score: 73.4
NoneNo IPR availablePFAMPF13921Myb_DNA-bind_6coord: 4..67
e-value: 2.5E-16
score: 59.7
NoneNo IPR availableGENE3D1.10.10.60coord: 60..118
e-value: 1.4E-19
score: 71.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 141..163
NoneNo IPR availablePANTHERPTHR45614MYB PROTEIN-RELATEDcoord: 4..120
IPR028311Myb-related protein BPANTHERPTHR45614:SF30MYB-RELATED PROTEIN Bcoord: 4..120
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 54..108
score: 26.069992
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 1..53
score: 20.99276
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 1..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_15contigContig_15:1314025..1316301 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|142336mRNA_4009Tribonema minus UTEX_B_3156 mRNAContig_15 1314025..1316301 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|142336|gw1.15.183.1 ID=Trimin1|142336|gw1.15.183.1|Name=jgi.p|Trimin1|142336|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=244bp
RRVWTKEEDEAIRGLVLQYGTRSWSVIADHIAKDFSIQGRSGKQCRERWH
NHLDPHINKNAWTEEEERIMSEAHRQLGNRWSEIAKRLPGRTDNHVKNHW
YSFMRRNVRRLNREVNEGPGGGARLLEDGSGGAAHVTLSPMDDGGGGSDA
MKRRRGGGGGGGRKAANLAELNRYFNAATEAAKSALDSGALAPELADISK
LAAAAEGGPLDLPLPLTSLHFAKGTPGFRDKLKRKLEETGGMQC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR028311MYBL2
IPR017930Myb_dom
IPR009057Homeobox-like_sf