Trimin1|141951|gw1.124.30.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|141951
Unique NameTrimin1|141951|gw1.124.30.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length51
Homology
BLAST of jgi.p|Trimin1|141951 vs. uniprot
Match: A0A835ZEA3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEA3_9STRA)

HSP 1 Score: 105 bits (261), Expect = 7.500e-29
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0
Query:    1 TGRWTAEEHERFLQGLREHNKQWKLIADLIRTRTVVQVRTHAQKHFQKMAR 51
            TGRWTAEEHERFLQGLREHNKQWKLIADLIRTRTVVQVRTHAQKHFQKMAR
Sbjct:    1 TGRWTAEEHERFLQGLREHNKQWKLIADLIRTRTVVQVRTHAQKHFQKMAR 51          
BLAST of jgi.p|Trimin1|141951 vs. uniprot
Match: A0A836CPG1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPG1_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.990e-21
Identity = 46/51 (90.20%), Postives = 49/51 (96.08%), Query Frame = 0
Query:    1 TGRWTAEEHERFLQGLREHNKQWKLIADLIRTRTVVQVRTHAQKHFQKMAR 51
            TGRWTAEEHERFLQGL  +NKQWKLIADLIRTRTVVQVRTHAQKHFQK+A+
Sbjct:   25 TGRWTAEEHERFLQGLALYNKQWKLIADLIRTRTVVQVRTHAQKHFQKVAK 75          
BLAST of jgi.p|Trimin1|141951 vs. uniprot
Match: A0A8J9S9N3_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9S9N3_PHATR)

HSP 1 Score: 80.1 bits (196), Expect = 9.350e-17
Identity = 37/51 (72.55%), Postives = 44/51 (86.27%), Query Frame = 0
Query:    1 TGRWTAEEHERFLQGLREHNKQWKLIADLIRTRTVVQVRTHAQKHFQKMAR 51
            TGRWTAEEH  FLQGL +H K WK IA LI++RTVVQ+RTHAQK+FQK+A+
Sbjct:  117 TGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAK 167          
BLAST of jgi.p|Trimin1|141951 vs. uniprot
Match: A0A1Z5KDK7_FISSO (Protein MYSM1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KDK7_FISSO)

HSP 1 Score: 80.1 bits (196), Expect = 2.660e-16
Identity = 37/51 (72.55%), Postives = 44/51 (86.27%), Query Frame = 0
Query:    1 TGRWTAEEHERFLQGLREHNKQWKLIADLIRTRTVVQVRTHAQKHFQKMAR 51
            TGRWTAEEH  FLQGL +H K WK IA LI++RTVVQ+RTHAQK+FQK+A+
Sbjct:   98 TGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAK 148          
BLAST of jgi.p|Trimin1|141951 vs. uniprot
Match: B7GAW9_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GAW9_PHATC)

HSP 1 Score: 80.1 bits (196), Expect = 2.720e-16
Identity = 37/51 (72.55%), Postives = 44/51 (86.27%), Query Frame = 0
Query:    1 TGRWTAEEHERFLQGLREHNKQWKLIADLIRTRTVVQVRTHAQKHFQKMAR 51
            TGRWTAEEH  FLQGL +H K WK IA LI++RTVVQ+RTHAQK+FQK+A+
Sbjct:  117 TGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAK 167          
BLAST of jgi.p|Trimin1|141951 vs. uniprot
Match: A0A6S8P3T4_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A6S8P3T4_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 2.740e-16
Identity = 37/51 (72.55%), Postives = 44/51 (86.27%), Query Frame = 0
Query:    1 TGRWTAEEHERFLQGLREHNKQWKLIADLIRTRTVVQVRTHAQKHFQKMAR 51
            TGRWTAEEH  FLQGL +H K WK IA LI++RTVVQ+RTHAQK+FQK+A+
Sbjct:   45 TGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAK 95          
BLAST of jgi.p|Trimin1|141951 vs. uniprot
Match: A0A7S1V9A3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V9A3_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 2.750e-16
Identity = 37/51 (72.55%), Postives = 44/51 (86.27%), Query Frame = 0
Query:    1 TGRWTAEEHERFLQGLREHNKQWKLIADLIRTRTVVQVRTHAQKHFQKMAR 51
            TGRWTA+EH  FLQGL EH K WK IA LI++RTVVQ+RTHAQK+FQK+A+
Sbjct:  167 TGRWTADEHRLFLQGLEEHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAK 217          
BLAST of jgi.p|Trimin1|141951 vs. uniprot
Match: A0A7S2R756_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R756_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 2.760e-16
Identity = 37/51 (72.55%), Postives = 44/51 (86.27%), Query Frame = 0
Query:    1 TGRWTAEEHERFLQGLREHNKQWKLIADLIRTRTVVQVRTHAQKHFQKMAR 51
            TGRWTAEEH  FLQGL +H K WK IA LI++RTVVQ+RTHAQK+FQK+A+
Sbjct:  191 TGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAK 241          
BLAST of jgi.p|Trimin1|141951 vs. uniprot
Match: B7GAX0_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GAX0_PHATC)

HSP 1 Score: 80.1 bits (196), Expect = 2.770e-16
Identity = 37/51 (72.55%), Postives = 44/51 (86.27%), Query Frame = 0
Query:    1 TGRWTAEEHERFLQGLREHNKQWKLIADLIRTRTVVQVRTHAQKHFQKMAR 51
            TGRWTAEEH  FLQGL +H K WK IA LI++RTVVQ+RTHAQK+FQK+A+
Sbjct:  117 TGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAK 167          
BLAST of jgi.p|Trimin1|141951 vs. uniprot
Match: B8C919_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C919_THAPS)

HSP 1 Score: 79.7 bits (195), Expect = 3.780e-16
Identity = 37/51 (72.55%), Postives = 44/51 (86.27%), Query Frame = 0
Query:    1 TGRWTAEEHERFLQGLREHNKQWKLIADLIRTRTVVQVRTHAQKHFQKMAR 51
            TGRWTAEEH  FLQGL +H K WK IA LI++RTVVQ+RTHAQK+FQK+A+
Sbjct:  418 TGRWTAEEHRLFLQGLEQHGKGWKKIAGLIKSRTVVQIRTHAQKYFQKLAK 468          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|141951 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZEA3_9STRA7.500e-29100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A836CPG1_9STRA1.990e-2190.20Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8J9S9N3_PHATR9.350e-1772.55Hypothetical protein (Fragment) n=1 Tax=Phaeodacty... [more]
A0A1Z5KDK7_FISSO2.660e-1672.55Protein MYSM1 n=2 Tax=Fistulifera solaris TaxID=15... [more]
B7GAW9_PHATC2.720e-1672.55Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A6S8P3T4_9STRA2.740e-1672.55Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S1V9A3_9STRA2.750e-1672.55Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S2R756_9STRA2.760e-1672.55Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
B7GAX0_PHATC2.770e-1672.55Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
B8C919_THAPS3.780e-1672.55Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 1..48
e-value: 2.0E-9
score: 47.3
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 1..46
score: 7.293994
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 3..46
e-value: 3.48277E-9
score: 44.4886
IPR006447Myb domain, plantsTIGRFAMTIGR01557TIGR01557coord: 3..48
e-value: 4.1E-10
score: 37.8
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 1..45
e-value: 3.5E-14
score: 52.7
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 1..50
score: 18.584251
NoneNo IPR availableGENE3D1.10.10.60coord: 3..51
e-value: 2.9E-18
score: 67.7
NoneNo IPR availablePANTHERPTHR12802:SF20MYB-LIKE PROTEIN Gcoord: 3..48
NoneNo IPR availablePANTHERPTHR12802SWI/SNF COMPLEX-RELATEDcoord: 3..48
IPR017884SANT domainPROSITEPS51293SANTcoord: 1..50
score: 13.104791
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 2..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_124contigContig_124:105165..105557 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|141951mRNA_15950Tribonema minus UTEX_B_3156 mRNAContig_124 105165..105557 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|141951|gw1.124.30.1 ID=Trimin1|141951|gw1.124.30.1|Name=jgi.p|Trimin1|141951|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=51bp
TGRWTAEEHERFLQGLREHNKQWKLIADLIRTRTVVQVRTHAQKHFQKMA
R
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR006447Myb_dom_plants
IPR017930Myb_dom
IPR017884SANT_dom
IPR009057Homeobox-like_sf