Trimin1|137159|gw1.276.3.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|137159
Unique NameTrimin1|137159|gw1.276.3.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length74
Homology
BLAST of jgi.p|Trimin1|137159 vs. uniprot
Match: A0A835Z231_9STRA (C2 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z231_9STRA)

HSP 1 Score: 150 bits (379), Expect = 3.540e-46
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0
Query:    1 DRMIEVGMLTARVIAARNVKAAVEGSFYGLLSPRSSNCYCRLQVGDSMQTSSTARQTLNPQWNREQFFFPVMVS 74
            DRMIEVGMLTARVIAARNVKAAVEGSFYGLLSPRSSNCYCRLQVGDSMQTSSTARQTLNPQWNREQFFFPVMVS
Sbjct:    1 DRMIEVGMLTARVIAARNVKAAVEGSFYGLLSPRSSNCYCRLQVGDSMQTSSTARQTLNPQWNREQFFFPVMVS 74          
BLAST of jgi.p|Trimin1|137159 vs. uniprot
Match: W7TL29_9STRA (C2 domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TL29_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 3.010e-7
Identity = 31/69 (44.93%), Postives = 41/69 (59.42%), Query Frame = 0
Query:    3 MIEVGMLTARVIAARNVKAAVEGSFYGLLSPRSSNCYCRLQVGDSMQTSSTARQTLNPQWNREQFFFPV 71
            +  VG L  R++AARN+ AAV G F+   S   SN Y  L+   S+Q +S    TL+P W REQ+FF V
Sbjct:   87 LTSVGTLIVRIVAARNLPAAVGGGFF---SNGHSNPYAILEFEGSVQGTSVVPHTLDPVWPREQYFFQV 152          
BLAST of jgi.p|Trimin1|137159 vs. uniprot
Match: A0A4D9CUC5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUC5_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 3.520e-7
Identity = 31/69 (44.93%), Postives = 41/69 (59.42%), Query Frame = 0
Query:    3 MIEVGMLTARVIAARNVKAAVEGSFYGLLSPRSSNCYCRLQVGDSMQTSSTARQTLNPQWNREQFFFPV 71
            +  VG L  R++AARN+ AAV G F+   S   SN Y  L+   S+Q +S    TL+P W REQ+FF V
Sbjct:   59 LTSVGTLIVRIVAARNLPAAVGGGFF---SNGHSNPYAILEFEGSVQGTSVVPHTLDPVWPREQYFFQV 124          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|137159 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A835Z231_9STRA3.540e-46100.00C2 domain-containing protein (Fragment) n=1 Tax=Tr... [more]
W7TL29_9STRA3.010e-744.93C2 domain-containing protein n=1 Tax=Nannochlorops... [more]
A0A4D9CUC5_9STRA3.520e-744.93Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035892C2 domain superfamilyGENE3D2.60.40.150C2 domaincoord: 1..74
e-value: 1.5E-11
score: 46.3
IPR035892C2 domain superfamilySUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 5..72
IPR000008C2 domainPFAMPF00168C2coord: 8..71
e-value: 2.7E-8
score: 34.0
IPR000008C2 domainPROSITEPS50004C2coord: 1..74
score: 10.400389
NoneNo IPR availableCDDcd00030C2coord: 9..71
e-value: 1.22793E-10
score: 50.5283

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_276contigContig_276:29749..30096 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|137159mRNA_18640Tribonema minus UTEX_B_3156 mRNAContig_276 29749..30096 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|137159|gw1.276.3.1 ID=Trimin1|137159|gw1.276.3.1|Name=jgi.p|Trimin1|137159|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=74bp
DRMIEVGMLTARVIAARNVKAAVEGSFYGLLSPRSSNCYCRLQVGDSMQT
SSTARQTLNPQWNREQFFFPVMVS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035892C2_domain_sf
IPR000008C2_dom