Trimin1|136229|gw1.64.66.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|136229
Unique NameTrimin1|136229|gw1.64.66.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length101
Homology
BLAST of jgi.p|Trimin1|136229 vs. uniprot
Match: A0A835YQ76_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ76_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 8.680e-25
Identity = 44/44 (100.00%), Postives = 44/44 (100.00%), Query Frame = 0
Query:    1 RARHFCLFFNRFGKCSAGAACPYAHDPAKVSVCLKFLRGACVDA 44
            RARHFCLFFNRFGKCSAGAACPYAHDPAKVSVCLKFLRGACVDA
Sbjct:    1 RARHFCLFFNRFGKCSAGAACPYAHDPAKVSVCLKFLRGACVDA 44          
BLAST of jgi.p|Trimin1|136229 vs. uniprot
Match: A0A2I0VYY2_9ASPA (Zinc finger CCCH domain-containing protein 7 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0VYY2_9ASPA)

HSP 1 Score: 69.3 bits (168), Expect = 9.400e-13
Identity = 30/43 (69.77%), Postives = 34/43 (79.07%), Query Frame = 0
Query:    3 RHFCLFFNRFGKCS-AGAACPYAHDPAKVSVCLKFLRGACVDA 44
            R FCLFF RFGKC+ +G  CPY HDPAKV++C KFLRG C DA
Sbjct:   78 RQFCLFFTRFGKCNKSGRKCPYIHDPAKVAICAKFLRGQCSDA 120          
BLAST of jgi.p|Trimin1|136229 vs. uniprot
Match: UPI0015CF9796 (zinc finger CCCH domain-containing protein 3 isoform X1 n=2 Tax=Electrophorus electricus TaxID=8005 RepID=UPI0015CF9796)

HSP 1 Score: 72.4 bits (176), Expect = 1.100e-12
Identity = 27/41 (65.85%), Postives = 35/41 (85.37%), Query Frame = 0
Query:    1 RARHFCLFFNRFGKCSAGAACPYAHDPAKVSVCLKFLRGAC 41
            +ARH+C+++NRFGKC+ G ACPY HDP KV+VC +FLRG C
Sbjct:  712 QARHYCMYYNRFGKCNRGNACPYIHDPEKVAVCTRFLRGTC 752          
BLAST of jgi.p|Trimin1|136229 vs. uniprot
Match: A0A2D4NAI2_9SAUR (Uncharacterized protein (Fragment) n=1 Tax=Micrurus spixii TaxID=129469 RepID=A0A2D4NAI2_9SAUR)

HSP 1 Score: 68.6 bits (166), Expect = 1.140e-12
Identity = 25/41 (60.98%), Postives = 34/41 (82.93%), Query Frame = 0
Query:    1 RARHFCLFFNRFGKCSAGAACPYAHDPAKVSVCLKFLRGAC 41
            R + +C+++NRFGKC+ G +CPY HDP KV+VC +FLRGAC
Sbjct:   52 RKKEYCMYYNRFGKCNRGESCPYIHDPEKVAVCTRFLRGAC 92          
BLAST of jgi.p|Trimin1|136229 vs. uniprot
Match: UPI000775E4FF (zinc finger CCCH domain-containing protein 3 n=1 Tax=Protobothrops mucrosquamatus TaxID=103944 RepID=UPI000775E4FF)

HSP 1 Score: 68.6 bits (166), Expect = 1.680e-12
Identity = 25/41 (60.98%), Postives = 34/41 (82.93%), Query Frame = 0
Query:    1 RARHFCLFFNRFGKCSAGAACPYAHDPAKVSVCLKFLRGAC 41
            R + +C+++NRFGKC+ G +CPY HDP KV+VC +FLRGAC
Sbjct:   45 RKKEYCMYYNRFGKCNRGESCPYIHDPEKVAVCTRFLRGAC 85          
BLAST of jgi.p|Trimin1|136229 vs. uniprot
Match: UPI000EAA0311 (zinc finger CCCH domain-containing protein 3-like n=1 Tax=Pseudonaja textilis TaxID=8673 RepID=UPI000EAA0311)

HSP 1 Score: 68.6 bits (166), Expect = 4.200e-12
Identity = 25/41 (60.98%), Postives = 34/41 (82.93%), Query Frame = 0
Query:    1 RARHFCLFFNRFGKCSAGAACPYAHDPAKVSVCLKFLRGAC 41
            R + +C+++NRFGKC+ G +CPY HDP KV+VC +FLRGAC
Sbjct:   58 RKKEYCMYYNRFGKCNRGESCPYIHDPEKVAVCTRFLRGAC 98          
BLAST of jgi.p|Trimin1|136229 vs. uniprot
Match: A0A2D0RYB3_ICTPU (zinc finger CCCH domain-containing protein 3 n=2 Tax=Ictaluridae TaxID=7996 RepID=A0A2D0RYB3_ICTPU)

HSP 1 Score: 70.1 bits (170), Expect = 7.110e-12
Identity = 26/41 (63.41%), Postives = 35/41 (85.37%), Query Frame = 0
Query:    1 RARHFCLFFNRFGKCSAGAACPYAHDPAKVSVCLKFLRGAC 41
            +A+ +C++FNRFGKC+ G+ACPY HDP KV+VC +FLRG C
Sbjct:  692 QAKQYCMYFNRFGKCNRGSACPYIHDPDKVAVCTRFLRGTC 732          
BLAST of jgi.p|Trimin1|136229 vs. uniprot
Match: A0A8B7JNK8_9AVES (zinc finger CCCH domain-containing protein 3-like n=1 Tax=Apteryx mantelli mantelli TaxID=202946 RepID=A0A8B7JNK8_9AVES)

HSP 1 Score: 65.9 bits (159), Expect = 7.120e-12
Identity = 23/41 (56.10%), Postives = 33/41 (80.49%), Query Frame = 0
Query:    1 RARHFCLFFNRFGKCSAGAACPYAHDPAKVSVCLKFLRGAC 41
            + + +C+++NRFGKC+ G +CPY HDP KV+VC +FLRG C
Sbjct:   47 KKKEYCMYYNRFGKCNRGESCPYIHDPEKVAVCTRFLRGTC 87          
BLAST of jgi.p|Trimin1|136229 vs. uniprot
Match: UPI0007ACDC56 (zinc finger CCCH domain-containing protein 3-like n=1 Tax=Sinocyclocheilus grahami TaxID=75366 RepID=UPI0007ACDC56)

HSP 1 Score: 68.9 bits (167), Expect = 7.900e-12
Identity = 26/41 (63.41%), Postives = 34/41 (82.93%), Query Frame = 0
Query:    1 RARHFCLFFNRFGKCSAGAACPYAHDPAKVSVCLKFLRGAC 41
            RA+ +C+++NRFGKC+ G ACPY HDP KV+VC +FLRG C
Sbjct:   73 RAKQYCMYYNRFGKCNHGDACPYIHDPDKVAVCTRFLRGTC 113          
BLAST of jgi.p|Trimin1|136229 vs. uniprot
Match: UPI000F4F3497 (zinc finger CCCH domain-containing protein 3 n=1 Tax=Tachysurus fulvidraco TaxID=1234273 RepID=UPI000F4F3497)

HSP 1 Score: 69.7 bits (169), Expect = 9.680e-12
Identity = 25/41 (60.98%), Postives = 36/41 (87.80%), Query Frame = 0
Query:    1 RARHFCLFFNRFGKCSAGAACPYAHDPAKVSVCLKFLRGAC 41
            +A+++C+++NRFGKC+ G+ACPY HDP KV+VC +FLRG C
Sbjct:  661 QAKNYCMYYNRFGKCNRGSACPYIHDPEKVAVCTRFLRGTC 701          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|136229 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YQ76_9STRA8.680e-25100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A2I0VYY2_9ASPA9.400e-1369.77Zinc finger CCCH domain-containing protein 7 n=1 T... [more]
UPI0015CF97961.100e-1265.85zinc finger CCCH domain-containing protein 3 isofo... [more]
A0A2D4NAI2_9SAUR1.140e-1260.98Uncharacterized protein (Fragment) n=1 Tax=Micruru... [more]
UPI000775E4FF1.680e-1260.98zinc finger CCCH domain-containing protein 3 n=1 T... [more]
UPI000EAA03114.200e-1260.98zinc finger CCCH domain-containing protein 3-like ... [more]
A0A2D0RYB3_ICTPU7.110e-1263.41zinc finger CCCH domain-containing protein 3 n=2 T... [more]
A0A8B7JNK8_9AVES7.120e-1256.10zinc finger CCCH domain-containing protein 3-like ... [more]
UPI0007ACDC567.900e-1263.41zinc finger CCCH domain-containing protein 3-like ... [more]
UPI000F4F34979.680e-1260.98zinc finger CCCH domain-containing protein 3 n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 81..101
e-value: 19.0
score: 6.0
coord: 1..27
e-value: 0.16
score: 21.0
coord: 29..52
e-value: 13.0
score: 7.5
coord: 54..79
e-value: 0.56
score: 18.3
IPR000571Zinc finger, CCCH-typePFAMPF00642zf-CCCHcoord: 6..27
e-value: 2.5E-5
score: 24.1
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 54..80
score: 11.206455
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 81..101
score: 10.821503
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 5..28
score: 12.417649
NoneNo IPR availableGENE3D4.10.1000.10coord: 26..82
e-value: 1.3E-13
score: 52.7
NoneNo IPR availablePANTHERPTHR46156:SF1ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 3coord: 1..101
NoneNo IPR availablePANTHERPTHR46156CCCH ZINGC FINGERcoord: 1..101
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 4..28

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_64contigContig_64:766823..767125 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|136229mRNA_10163Tribonema minus UTEX_B_3156 mRNAContig_64 766823..767125 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|136229|gw1.64.66.1 ID=Trimin1|136229|gw1.64.66.1|Name=jgi.p|Trimin1|136229|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=101bp
RARHFCLFFNRFGKCSAGAACPYAHDPAKVSVCLKFLRGACVDAACPLSH
TLDAGKMPVCRHYLEGVCAVENCPYRHVNVARGAALCPSFQKGYCPLGAE
C
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH
IPR036855Znf_CCCH_sf