Trimin1|135815|gw1.412.2.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|135815
Unique Name	Trimin1\|135815\|gw1.412.2.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	255

Homology

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BLAST of jgi.p|Trimin1|135815 vs. uniprot
Match: A0A835YSQ1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSQ1_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 6.370e-20
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0

Query:    1 GNARVCEHGRQRYYCGPCGGGGXXXXXXXXXXXXXXXXXXXXXXXRDIGXXXXXXXXXXXXXXXXRGSTQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQHPGRLCEHGRQRYYCGPCGGAGI 152
            GNARVCEHGRQRYYCGPCGGGGXXXXXXXXXXXXXXXXXXXXXXXRDIGXXXXXXXXXXXXXXXXRGSTQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQHPGRLCEHGRQRYYCGPCGGAGI
Sbjct:    1 GNARVCEHGRQRYYCGPCGGGGXXXXXXXXXXXXXXXXXXXXXXXRDIGXXXXXXXXXXXXXXXXRGSTQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQHPGRLCEHGRQRYYCGPCGGAGI 152

[Close]

BLAST of jgi.p|Trimin1|135815 vs. uniprot
Match: A0A835ZAE2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAE2_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 2.490e-5
Identity = 22/22 (100.00%), Postives = 22/22 (100.00%), Query Frame = 0

Query:    1 GNARVCEHGRQRYYCGPCGGGG 22
            GNARVCEHGRQRYYCGPCGGGG
Sbjct:  103 GNARVCEHGRQRYYCGPCGGGG 124

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|135815 vs. uniprot

BLAST of jgi.p|Trimin1|135815 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835YSQ1_9STRA	6.370e-20	100.00	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A835ZAE2_9STRA	2.490e-5	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_412	contig	Contig_412:12113..16309 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|135815	mRNA_19003	Tribonema minus UTEX_B_3156	mRNA	Contig_412 12113..16309 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|135815|gw1.412.2.1 ID=Trimin1|135815|gw1.412.2.1|Name=jgi.p|Trimin1|135815|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=255bp
GNARVCEHGRQRYYCGPCGGGGICEHGRRRAQCKPCGGSSLCSHGRDIGR
RRAQRKPCGRSSLCSRGSTQRRRRRRRCWSTASCSRRRQRSRRRRRQRRR
SSSSTCPRSRRRRRSTTHCGGARGGRRRQHPGRLCEHGRQRYYCGPCGGA
GICEHGRRKSQCKQCGGTSLCSHGRMRYRCADCKGSSMCHHGRLRYFCKD
CGGRGVCTHGRQRRYCRECGGSSMCHHGKRRNNCKECGGSQVCEHSKQYS
RCKEC