Trimin1|135806|gw1.189.31.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|135806
Unique NameTrimin1|135806|gw1.189.31.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length85
Homology
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BLAST of jgi.p|Trimin1|135806 vs. uniprot
Match: A0A836CI78_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI78_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 2.660e-14
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 0 
Query:    1 KPFKCDVEGCGAAFTTSGSLVSHRRTHTGEK 31
            KPFKCDVEGCGAAFTTSGSLVSHRRTHTGEK
Sbjct:    1 KPFKCDVEGCGAAFTTSGSLVSHRRTHTGEK 31
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|135806 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CI78_9STRA2.660e-14100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 3..27
e-value: 4.1E-4
score: 29.7
coord: 33..57
e-value: 0.0013
score: 28.0
coord: 63..85
e-value: 25.0
score: 9.7
IPR013087Zinc finger C2H2-typePFAMPF00096zf-C2H2coord: 33..57
e-value: 3.2E-5
score: 24.2
coord: 3..27
e-value: 1.9E-5
score: 24.8
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 5..27
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 35..57
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 63..85
score: 9.265423
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 33..62
score: 14.897642
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 3..32
score: 16.123846
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 1..26
e-value: 3.6E-14
score: 54.3
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 27..56
e-value: 1.9E-15
score: 58.6
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 57..85
e-value: 1.4E-10
score: 42.7
NoneNo IPR availablePANTHERPTHR19818ZINC FINGER PROTEIN ZIC AND GLIcoord: 1..84
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 1..63
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 57..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_189contigContig_189:51498..51752 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|135806mRNA_17339Tribonema minus UTEX_B_3156 mRNAContig_189 51498..51752 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|135806|gw1.189.31.1 ID=Trimin1|135806|gw1.189.31.1|Name=jgi.p|Trimin1|135806|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=85bp
KPFKCDVEGCGAAFTTSGSLVSHRRTHTGEKPFVCDIGGCGAAFTTSSQL
IVHTRIHSNEKPFSCDFEGCDAAFAQSSHLVTHKQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf