Trimin1|134603|gw1.169.16.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|134603
Unique NameTrimin1|134603|gw1.169.16.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length161
Homology
BLAST of jgi.p|Trimin1|134603 vs. uniprot
Match: A0A835Z9E5_9STRA (PARP catalytic domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9E5_9STRA)

HSP 1 Score: 310 bits (795), Expect = 7.450e-107
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0
Query:    1 EYNLAHGHLTSQSELAASGMRVAQIDVYETSEKVAEQYRQARSQLAQASKDIEELWVLHGTSSSVVPNIMCGGFKVGGREGIPIRHGSQHGEGVYTSTQLSIALSHTSNESPAMVIMARALKGAHIRSSAASAAYDSWSPSNNWYIFKSGAQLLPVYVIHL 161
            EYNLAHGHLTSQSELAASGMRVAQIDVYETSEKVAEQYRQARSQLAQASKDIEELWVLHGTSSSVVPNIMCGGFKVGGREGIPIRHGSQHGEGVYTSTQLSIALSHTSNESPAMVIMARALKGAHIRSSAASAAYDSWSPSNNWYIFKSGAQLLPVYVIHL
Sbjct:    1 EYNLAHGHLTSQSELAASGMRVAQIDVYETSEKVAEQYRQARSQLAQASKDIEELWVLHGTSSSVVPNIMCGGFKVGGREGIPIRHGSQHGEGVYTSTQLSIALSHTSNESPAMVIMARALKGAHIRSSAASAAYDSWSPSNNWYIFKSGAQLLPVYVIHL 161          
BLAST of jgi.p|Trimin1|134603 vs. uniprot
Match: A0A835Z184_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z184_9STRA)

HSP 1 Score: 189 bits (481), Expect = 9.910e-59
Identity = 97/125 (77.60%), Postives = 106/125 (84.80%), Query Frame = 0
Query:    1 EYNLAHGHLTSQSELAASGMRVAQIDVYETSEKVAEQYRQARSQLAQASKDIEELWVLHGTSSSVVPNIMCGGFKVGGREGIPIRHGSQHGEGVYTSTQLSIALSHTSNESPAMVIMARALKGAH 125
            EY +AHGHLTSQ  LAASG +V QIDVYETSEKVAEQY + RS LAQA+K IEE+WVLHGTSSS+VP IMCGGFKVGG +GI  RHGSQHG GVYTST ++ AL HT NE PAMVIMARALKGAH
Sbjct:   52 EYKIAHGHLTSQGGLAASGFKVVQIDVYETSEKVAEQYAKLRSHLAQANKSIEEIWVLHGTSSSIVPKIMCGGFKVGGLDGILARHGSQHGRGVYTSTHVADALRHTDNERPAMVIMARALKGAH 176          
BLAST of jgi.p|Trimin1|134603 vs. uniprot
Match: A0A836CHI6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHI6_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 5.900e-19
Identity = 53/141 (37.59%), Postives = 73/141 (51.77%), Query Frame = 0
Query:   22 VAQIDVYETSEKVAEQYRQARSQLAQASKDIEELWVLHGTSSSVVPNIMCGGFKV-GGREGIPIRHGSQHGEGVYTST-QLSIALSHTSNESPAMVIMARALKGAHIRSSAASAAYDSWSPSNNWYIFKSGAQLLPVYVIH 160
            V ++  YE    V + +   +S+L  A K  +E WV H T    +P IMC GF+V G     P+ +GS HG GVY ++   SI +     +    VI+ARALKG            D W    NW +F+SGAQLLP YV++
Sbjct:   19 VTEVHAYECGAAVTDSFNAKKSELQSAGKSTDEAWVFHATHRDNIPAIMCTGFRVCGSGAAFPVLNGSAHGYGVYAASGPPSINVYANEVDGTKAVILARALKGQEGERGQG----DRWGAGGNWRVFRSGAQLLPCYVVY 155          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|134603 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A835Z9E5_9STRA7.450e-107100.00PARP catalytic domain-containing protein (Fragment... [more]
A0A835Z184_9STRA9.910e-5977.60Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CHI6_9STRA5.900e-1937.59Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 31..51
NoneNo IPR availableGENE3D3.90.228.10coord: 1..161
e-value: 1.1E-14
score: 56.8
NoneNo IPR availableSUPERFAMILY56399ADP-ribosylationcoord: 46..160
IPR012317Poly(ADP-ribose) polymerase, catalytic domainPFAMPF00644PARPcoord: 22..124
e-value: 1.9E-6
score: 27.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_169contigContig_169:288994..289476 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|134603mRNA_17026Tribonema minus UTEX_B_3156 mRNAContig_169 288994..289476 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|134603|gw1.169.16.1 ID=Trimin1|134603|gw1.169.16.1|Name=jgi.p|Trimin1|134603|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=161bp
EYNLAHGHLTSQSELAASGMRVAQIDVYETSEKVAEQYRQARSQLAQASK
DIEELWVLHGTSSSVVPNIMCGGFKVGGREGIPIRHGSQHGEGVYTSTQL
SIALSHTSNESPAMVIMARALKGAHIRSSAASAAYDSWSPSNNWYIFKSG
AQLLPVYVIHL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012317Poly(ADP-ribose)pol_cat_dom