Trimin1|134589|gw1.140.16.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|134589
Unique NameTrimin1|134589|gw1.140.16.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length80
Homology
BLAST of jgi.p|Trimin1|134589 vs. uniprot
Match: A0A836CLC8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLC8_9STRA)

HSP 1 Score: 170 bits (430), Expect = 8.910e-54
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0
Query:    1 QESQNLKCVEEDKRIYIKAAILHIMYTPRKALWHQQLCSANCVYFPPELKVIKRMIEVLFERSYMCTSIGPLTPSTYRHL 80
            QESQNLKCVEEDKRIYIKAAILHIMYTPRKALWHQQLCSANCVYFPPELKVIKRMIEVLFERSYMCTSIGPLTPSTYRHL
Sbjct:    1 QESQNLKCVEEDKRIYIKAAILHIMYTPRKALWHQQLCSANCVYFPPELKVIKRMIEVLFERSYMCTSIGPLTPSTYRHL 80          
BLAST of jgi.p|Trimin1|134589 vs. uniprot
Match: UPI00083BABBF (cullin-2 n=1 Tax=Nicrophorus vespilloides TaxID=110193 RepID=UPI00083BABBF)

HSP 1 Score: 52.4 bits (124), Expect = 5.430e-6
Identity = 27/64 (42.19%), Postives = 43/64 (67.19%), Query Frame = 0
Query:    6 LKCVEEDKRIYIKAAILHIMYTPRKALWH----QQLCSANCVYFPPELKVIKRMIEVLFERSYM 65
            +  VEED+++Y++AAI+ IM + RK L H    Q++C+ + V F P + +IK+ IE L +R YM
Sbjct:  669 INSVEEDRKLYLQAAIVRIMKS-RKVLKHNALIQEVCAQSKVSFAPSIPMIKKCIEALIDRHYM 731          
BLAST of jgi.p|Trimin1|134589 vs. uniprot
Match: A0A7F5RC03_AGRPL (cullin-2 n=1 Tax=Agrilus planipennis TaxID=224129 RepID=A0A7F5RC03_AGRPL)

HSP 1 Score: 50.4 bits (119), Expect = 2.590e-5
Identity = 26/64 (40.62%), Postives = 42/64 (65.62%), Query Frame = 0
Query:    6 LKCVEEDKRIYIKAAILHIMYTPRKALWHQQL----CSANCVYFPPELKVIKRMIEVLFERSYM 65
            +  VEED+++Y++AAI+ IM + RK L H QL    C+ + V F P + +IK+ IE L ++ Y+
Sbjct:  670 MNSVEEDRKLYLQAAIVRIMKS-RKVLKHNQLIQEVCAQSKVSFAPSIPMIKKCIEALIDKQYI 732          
BLAST of jgi.p|Trimin1|134589 vs. uniprot
Match: A0A8K0DAV3_9COLE (Uncharacterized protein n=1 Tax=Ignelater luminosus TaxID=2038154 RepID=A0A8K0DAV3_9COLE)

HSP 1 Score: 50.1 bits (118), Expect = 3.550e-5
Identity = 25/64 (39.06%), Postives = 43/64 (67.19%), Query Frame = 0
Query:    6 LKCVEEDKRIYIKAAILHIMYTPRKALWH----QQLCSANCVYFPPELKVIKRMIEVLFERSYM 65
            +  VEED+++Y++AAI+ IM + RK L H    Q++C+ + V F P + +IK+ IE L ++ Y+
Sbjct:  669 MNSVEEDRKLYLQAAIVRIMKS-RKVLKHNALIQEVCAQSKVSFAPSIPMIKKCIEALIDKQYI 731          
BLAST of jgi.p|Trimin1|134589 vs. uniprot
Match: UPI001CF4743F (cullin-2-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF4743F)

HSP 1 Score: 49.7 bits (117), Expect = 4.850e-5
Identity = 29/78 (37.18%), Postives = 46/78 (58.97%), Query Frame = 0
Query:    4 QNLKCVEEDKRIYIKAAILHIMYTPRKALWH----QQLCSANCVYFPPELKVIKRMIEVLFERSYMCTSIGPLTPSTY 77
            Q L  V+ED+++Y++AAI+ IM + RKAL H    Q++ S +   F P + +IK+ IE L ++ Y+    G     TY
Sbjct:  665 QTLSSVDEDRKMYLQAAIVRIMKS-RKALKHNSLMQEVISQSSARFTPSVAMIKKCIESLIDKQYLERREGTKDEYTY 741          
BLAST of jgi.p|Trimin1|134589 vs. uniprot
Match: UPI001D08B219 (cullin-2 n=1 Tax=Chrysoperla carnea TaxID=189513 RepID=UPI001D08B219)

HSP 1 Score: 49.7 bits (117), Expect = 4.850e-5
Identity = 30/85 (35.29%), Postives = 54/85 (63.53%), Query Frame = 0
Query:    1 QESQN-LKCVEEDKRIYIKAAILHIMYTPRKALWH----QQLCSANCVYFPPELKVIKRMIEVLFERSYMCTSIGPLTPSTYRHL 80
            QE +N +  VEED+++Y++AAI+ IM + RK L H    Q++ S +   F P +++IK+ IE L ++ Y+  +  P +P +Y ++
Sbjct:  664 QEVENTISSVEEDRKLYLQAAIVRIMKS-RKLLHHNELIQEVLSQSKASFAPSIQMIKKCIEALIDKQYLERT--PNSPDSYSYV 745          
BLAST of jgi.p|Trimin1|134589 vs. uniprot
Match: A0A7J6ZML6_9COLE (CULLIN_2 domain-containing protein n=3 Tax=Lampyridae TaxID=7049 RepID=A0A7J6ZML6_9COLE)

HSP 1 Score: 49.7 bits (117), Expect = 4.850e-5
Identity = 25/64 (39.06%), Postives = 43/64 (67.19%), Query Frame = 0
Query:    6 LKCVEEDKRIYIKAAILHIMYTPRKALWH----QQLCSANCVYFPPELKVIKRMIEVLFERSYM 65
            +  VEED+++Y++AAI+ IM + RK L H    Q++C+ + V F P + +IK+ IE L ++ Y+
Sbjct:  684 MNSVEEDRKLYLQAAIVRIMKS-RKILKHNALIQEVCAQSKVSFAPSIPMIKKCIEALIDKQYI 746          
BLAST of jgi.p|Trimin1|134589 vs. uniprot
Match: A0A6P8IC96_ACTTE (cullin-2-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IC96_ACTTE)

HSP 1 Score: 49.3 bits (116), Expect = 6.630e-5
Identity = 29/78 (37.18%), Postives = 45/78 (57.69%), Query Frame = 0
Query:    4 QNLKCVEEDKRIYIKAAILHIMYTPRKALWH----QQLCSANCVYFPPELKVIKRMIEVLFERSYMCTSIGPLTPSTY 77
            Q L  V+ED+++Y++AAI+ IM + RK L H    Q++ S +   F P + +IK+ IE L E+ Y+    G     TY
Sbjct:  662 QTLVSVDEDRKMYLQAAIVRIMKS-RKVLKHNSLIQEVISQSRARFTPNIPMIKKCIEALIEKQYLERKEGTKEEYTY 738          
BLAST of jgi.p|Trimin1|134589 vs. uniprot
Match: C3Y4H3_BRAFL (CULLIN_2 domain-containing protein n=4 Tax=Branchiostoma TaxID=7737 RepID=C3Y4H3_BRAFL)

HSP 1 Score: 49.3 bits (116), Expect = 6.630e-5
Identity = 29/75 (38.67%), Postives = 43/75 (57.33%), Query Frame = 0
Query:    7 KCVEEDKRIYIKAAILHIMYTPRKALWH----QQLCSANCVYFPPELKVIKRMIEVLFERSYMCTSIGPLTPSTY 77
            K V+ED+++Y++AAI+ IM   RKAL H    Q++ S +   F P + +IKR IE L  + Y+  S       TY
Sbjct:  668 KAVDEDRKLYLQAAIVRIMKA-RKALKHNTLIQEVISQSRARFNPSISMIKRCIEQLINKEYIARSNDAADEYTY 741          
BLAST of jgi.p|Trimin1|134589 vs. uniprot
Match: A0A067QY00_ZOONE (Cullin-2 n=2 Tax=Zootermopsis nevadensis TaxID=136037 RepID=A0A067QY00_ZOONE)

HSP 1 Score: 49.3 bits (116), Expect = 6.630e-5
Identity = 25/66 (37.88%), Postives = 43/66 (65.15%), Query Frame = 0
Query:    4 QNLKCVEEDKRIYIKAAILHIMYTPRKALWH----QQLCSANCVYFPPELKVIKRMIEVLFERSYM 65
            Q L  V+ED+++Y++AAI+ +M + RK L H    Q++ S + V F P + +IK+ IE L ++ Y+
Sbjct:  666 QTLSAVDEDRKLYLQAAIVRVMKS-RKVLRHNALIQEVLSQSKVTFAPSISMIKKCIEALIDKQYI 730          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|134589 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A836CLC8_9STRA8.910e-54100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
UPI00083BABBF5.430e-642.19cullin-2 n=1 Tax=Nicrophorus vespilloides TaxID=11... [more]
A0A7F5RC03_AGRPL2.590e-540.63cullin-2 n=1 Tax=Agrilus planipennis TaxID=224129 ... [more]
A0A8K0DAV3_9COLE3.550e-539.06Uncharacterized protein n=1 Tax=Ignelater luminosu... [more]
UPI001CF4743F4.850e-537.18cullin-2-like n=1 Tax=Acropora millepora TaxID=452... [more]
UPI001D08B2194.850e-535.29cullin-2 n=1 Tax=Chrysoperla carnea TaxID=189513 R... [more]
A0A7J6ZML6_9COLE4.850e-539.06CULLIN_2 domain-containing protein n=3 Tax=Lampyri... [more]
A0A6P8IC96_ACTTE6.630e-537.18cullin-2-like n=1 Tax=Actinia tenebrosa TaxID=6105... [more]
C3Y4H3_BRAFL6.630e-538.67CULLIN_2 domain-containing protein n=4 Tax=Branchi... [more]
A0A067QY00_ZOONE6.630e-537.88Cullin-2 n=2 Tax=Zootermopsis nevadensis TaxID=136... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 1..68
e-value: 3.4E-9
score: 38.5
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 3..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_140contigContig_140:20556..20810 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|134589mRNA_15623Tribonema minus UTEX_B_3156 mRNAContig_140 20556..20810 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|134589|gw1.140.16.1 ID=Trimin1|134589|gw1.140.16.1|Name=jgi.p|Trimin1|134589|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=80bp
QESQNLKCVEEDKRIYIKAAILHIMYTPRKALWHQQLCSANCVYFPPELK
VIKRMIEVLFERSYMCTSIGPLTPSTYRHL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036388WH-like_DNA-bd_sf
IPR036390WH_DNA-bd_sf