Trimin1|134368|gw1.211.27.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|134368
Unique NameTrimin1|134368|gw1.211.27.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length224
Homology
BLAST of jgi.p|Trimin1|134368 vs. uniprot
Match: A0A836CJ88_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ88_9STRA)

HSP 1 Score: 360 bits (925), Expect = 1.320e-124
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0
Query:    1 PRAPPHEVQSLQLGGAARAWFGRMYFPDAAATLARAAADDIVAEAYAASAAVQASRSLSFGEYRSQTYAAFHGGAGHAASAVGCAPISSMSGSDSGASRVLVDPGSCTAAEKYCWMGCRAIPADLVCASADMVCRNPIDGTFWPENYTTPTGPTHCFDCIIQCPNGDGTYGTGATPTP 178
            PRAPPHEVQSLQLGGAARAWFGRMYFPDAAATLARAAADDIVAEAYAASAAVQASRSLSFGEYRSQTYAAFHGGAGHAASAVGCAPISSMSGSDSGASRVLVDPGSCTAAEKYCWMGCRAIPADLVCASADMVCRNPIDGTFWPENYTTPTGPTHCFDCIIQCPNGDGTYGTGATPTP
Sbjct:    1 PRAPPHEVQSLQLGGAARAWFGRMYFPDAAATLARAAADDIVAEAYAASAAVQASRSLSFGEYRSQTYAAFHGGAGHAASAVGCAPISSMSGSDSGASRVLVDPGSCTAAEKYCWMGCRAIPADLVCASADMVCRNPIDGTFWPENYTTPTGPTHCFDCIIQCPNGDGTYGTGATPTP 178          
BLAST of jgi.p|Trimin1|134368 vs. uniprot
Match: A0A835Z1Z9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Z9_9STRA)

HSP 1 Score: 322 bits (825), Expect = 3.500e-109
Identity = 158/169 (93.49%), Postives = 160/169 (94.67%), Query Frame = 0
Query:    1 PRAPPHEVQSLQLGGAARAWFGRMYFPDAAATLARAAADDIVAEAYAASAAVQASRSLSFGEYRSQTYAAFHGGAGHAASAVGCAPISSMSGSDSGASRVLVDPGSCTAAEKYCWMGCRAIPADLVCASADMVCRNPIDGTFWPENYTTPTGPTHCFDCIIQCPNGDGT 169
            PRAPPHEVQSLQLGGAARAWFGRMYFPDAAATLAR AA DIV+EAYA SAAVQASR LSFGEYRSQTYAAFHGGAGH AS  GCAPISSMSG DSGA R+LVDPGSCTAAEKYCWMGCRAIPADLVCASADMVCRNPIDGTFWPENYTTPTGPTHCFDCIIQCPNGDGT
Sbjct:   69 PRAPPHEVQSLQLGGAARAWFGRMYFPDAAATLARDAAGDIVSEAYAPSAAVQASRGLSFGEYRSQTYAAFHGGAGHVASTAGCAPISSMSGPDSGARRLLVDPGSCTAAEKYCWMGCRAIPADLVCASADMVCRNPIDGTFWPENYTTPTGPTHCFDCIIQCPNGDGT 237          
BLAST of jgi.p|Trimin1|134368 vs. uniprot
Match: A0A836CGZ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGZ6_9STRA)

HSP 1 Score: 137 bits (344), Expect = 1.770e-34
Identity = 84/176 (47.73%), Postives = 98/176 (55.68%), Query Frame = 0
Query:    1 PRAPPHEVQSLQLGGAARAWFGRMYFPDAAATLARAAA---DDIVAEAYAASAAVQASRSLSFGEYRSQTYAAFHGGAGHAASAVGCAPISSMSGSDSGASRVLVDPGSCTAAEKY-CWMGCRAIPADLVCASADMVCRNPIDGTFWPENYTTPTG--PTHCFDCIIQCPNGDGTY 170
            P+AP HEV SL + GAARAWFGRMYFP A A L        DD +  A  A         L+FG Y      AF  G GH+ASA GC+P  S      GA+R L D  SC AA K+ CWM C+AIP    CA + M CRNP +G FWP NY       P HC+DCI+QCP   G +
Sbjct:  279 PKAPLHEVVSLDISGAARAWFGRMYFPLADAKLHLQDGELLDDAIHNAVDAGG-------LTFGAYHQHASEAFRRGLGHSASAAGCSP--SAVSRHLGAARELADAASCKAAGKFFCWMSCQAIPKKARCAWSKMRCRNPKNGKFWPANYIDKKTKKPGHCYDCIVQCPKPGGGW 445          
BLAST of jgi.p|Trimin1|134368 vs. uniprot
Match: A0A835Z2A5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2A5_9STRA)

HSP 1 Score: 131 bits (329), Expect = 3.140e-34
Identity = 81/169 (47.93%), Postives = 94/169 (55.62%), Query Frame = 0
Query:    1 PRAPPHEVQSLQLGGAARAWFGRMYFPDAAATLARAAA---DDIVAEAYAASAAVQASRSLSFGEYRSQTYAAFHGGAGHAASAVGCAPISSMSGSDSGASRVLVDPGSCTAAEKY-CWMGCRAIPADLVCASADMVCRNPIDGTFWPENYTTPTG--PTHCFDCIIQC 163
            P+AP HEV S+ + GAARAWFGRMYFP A A L        DD +  A+ A         L+FG Y      AF  G GH+ASA GC+P  S      GA+R L D  SC AA K+ CWM C+AIP    CA + M CRNP  G FWP NY       P HC DCI+QC
Sbjct:   70 PKAPLHEVVSMDVSGAARAWFGRMYFPLADAKLRLQDGELLDDAIHNAFDAGG-------LTFGAYHQHAAEAFRRGQGHSASAAGCSP--SAVSRHLGAARELADAASCKAAGKFFCWMSCQAIPKKPKCAWSKMRCRNPKTGKFWPANYIDKKTKKPGHCSDCIVQC 229          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|134368 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A836CJ88_9STRA1.320e-124100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835Z1Z9_9STRA3.500e-10993.49Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A836CGZ6_9STRA1.770e-3447.73Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z2A5_9STRA3.140e-3447.93Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 170..224
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 176..190
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 191..215
NoneNo IPR availablePANTHERPTHR40855FAMILY NOT NAMEDcoord: 1..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_211contigContig_211:53225..53896 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|134368mRNA_16523Tribonema minus UTEX_B_3156 mRNAContig_211 53225..53896 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|134368|gw1.211.27.1 ID=Trimin1|134368|gw1.211.27.1|Name=jgi.p|Trimin1|134368|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=224bp
PRAPPHEVQSLQLGGAARAWFGRMYFPDAAATLARAAADDIVAEAYAASA
AVQASRSLSFGEYRSQTYAAFHGGAGHAASAVGCAPISSMSGSDSGASRV
LVDPGSCTAAEKYCWMGCRAIPADLVCASADMVCRNPIDGTFWPENYTTP
TGPTHCFDCIIQCPNGDGTYGTGATPTPTPTPPPTNKPTRKPTRTPTSKP
TRKPTHTPTSKPTRQPTRKPTRKP
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