Trimin1|134141|gw1.22.31.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|134141
Unique NameTrimin1|134141|gw1.22.31.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length78
Homology
BLAST of jgi.p|Trimin1|134141 vs. uniprot
Match: A0A835Z1Q6_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Q6_9STRA)

HSP 1 Score: 171 bits (433), Expect = 2.690e-54
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0
Query:    1 VSRGYKNWGQLAAHMPGRTSKQCRERWIHHLDPAINKSDYTAEEDAKILALQKDLGNKWSQIALHLPGRTENAIKIRW 78
            VSRGYKNWGQLAAHMPGRTSKQCRERWIHHLDPAINKSDYTAEEDAKILALQKDLGNKWSQIALHLPGRTENAIKIRW
Sbjct:    1 VSRGYKNWGQLAAHMPGRTSKQCRERWIHHLDPAINKSDYTAEEDAKILALQKDLGNKWSQIALHLPGRTENAIKIRW 78          
BLAST of jgi.p|Trimin1|134141 vs. uniprot
Match: A0A7S2UU49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU49_9STRA)

HSP 1 Score: 139 bits (350), Expect = 2.140e-38
Identity = 59/78 (75.64%), Postives = 67/78 (85.90%), Query Frame = 0
Query:    1 VSRGYKNWGQLAAHMPGRTSKQCRERWIHHLDPAINKSDYTAEEDAKILALQKDLGNKWSQIALHLPGRTENAIKIRW 78
            V +G+KNWGQLAA MPGRTSKQCRERW HHLDP++ K +YT EED  IL LQ +LGNKWS+IA HLPGRTENA+KIRW
Sbjct:   94 VGKGFKNWGQLAAQMPGRTSKQCRERWSHHLDPSVKKGEYTTEEDNTILRLQSELGNKWSEIAKHLPGRTENAVKIRW 171          
BLAST of jgi.p|Trimin1|134141 vs. uniprot
Match: A0A7S2UZV2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZV2_9STRA)

HSP 1 Score: 129 bits (324), Expect = 1.930e-34
Identity = 56/73 (76.71%), Postives = 61/73 (83.56%), Query Frame = 0
Query:    6 KNWGQLAAHMPGRTSKQCRERWIHHLDPAINKSDYTAEEDAKILALQKDLGNKWSQIALHLPGRTENAIKIRW 78
            KNWGQLA  MPGRTSKQCRERW HHLDP + K +YTAEEDA IL LQ  LGNKWS+IA  +PGRTENA+KIRW
Sbjct:    1 KNWGQLAEQMPGRTSKQCRERWNHHLDPTVKKGEYTAEEDAAILQLQASLGNKWSEIAKQIPGRTENAVKIRW 73          
BLAST of jgi.p|Trimin1|134141 vs. uniprot
Match: H3G911_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G911_PHYRM)

HSP 1 Score: 117 bits (292), Expect = 1.190e-31
Identity = 51/78 (65.38%), Postives = 62/78 (79.49%), Query Frame = 0
Query:    1 VSRGYKNWGQLAAHMPGRTSKQCRERWIHHLDPAINKSDYTAEEDAKILALQKDLGNKWSQIALHLPGRTENAIKIRW 78
            V+ G KNWGQ+A  +PGRTSKQCRERW +HLDP+I + +Y+AEED  IL  Q  LGN+WS IA  LPGRTE+A+KIRW
Sbjct:   76 VAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIVRGEYSAEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRW 153          
BLAST of jgi.p|Trimin1|134141 vs. uniprot
Match: A0A6H5K458_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K458_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 1.130e-30
Identity = 52/78 (66.67%), Postives = 63/78 (80.77%), Query Frame = 0
Query:    1 VSRGYKNWGQLAAHMPGRTSKQCRERWIHHLDPAINKSDYTAEEDAKILALQKDLGNKWSQIALHLPGRTENAIKIRW 78
            V+ G+KNWG L+A +PGRTSKQCRERW HHLDP I K  +T EED  I++LQ+ +GNKW++IA HL GRTENA KIRW
Sbjct:  135 VNEGHKNWGSLSARVPGRTSKQCRERWCHHLDPRIVKGGWTEEEDQIIVSLQQQMGNKWAKIAQHLDGRTENATKIRW 212          
BLAST of jgi.p|Trimin1|134141 vs. uniprot
Match: A0A418B0H6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B0H6_9STRA)

HSP 1 Score: 120 bits (300), Expect = 4.020e-30
Identity = 52/78 (66.67%), Postives = 63/78 (80.77%), Query Frame = 0
Query:    1 VSRGYKNWGQLAAHMPGRTSKQCRERWIHHLDPAINKSDYTAEEDAKILALQKDLGNKWSQIALHLPGRTENAIKIRW 78
            V+ G KNWGQ+A+H+PGRTSKQCRERW +HLDP INK +YT EED  I+ +Q  LGN+WS IA  L GRTE+A+KIRW
Sbjct:  175 VAEGRKNWGQVASHIPGRTSKQCRERWCNHLDPNINKGNYTREEDQLIVDMQAKLGNRWSVIAQQLSGRTEDAVKIRW 252          
BLAST of jgi.p|Trimin1|134141 vs. uniprot
Match: D7FQG8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQG8_ECTSI)

HSP 1 Score: 120 bits (302), Expect = 4.070e-30
Identity = 52/78 (66.67%), Postives = 61/78 (78.21%), Query Frame = 0
Query:    1 VSRGYKNWGQLAAHMPGRTSKQCRERWIHHLDPAINKSDYTAEEDAKILALQKDLGNKWSQIALHLPGRTENAIKIRW 78
            V+ G+KNWG L+A +PGRTSKQCRERW HHLDP I K  +T  ED  I+ LQ+ +GNKW+QIA HL GRTENA KIRW
Sbjct:   84 VNEGHKNWGSLSARIPGRTSKQCRERWCHHLDPRIVKGGWTEAEDQMIILLQQQMGNKWAQIAQHLDGRTENATKIRW 161          
BLAST of jgi.p|Trimin1|134141 vs. uniprot
Match: A0A6G0XBC5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XBC5_9STRA)

HSP 1 Score: 120 bits (301), Expect = 4.260e-30
Identity = 52/78 (66.67%), Postives = 63/78 (80.77%), Query Frame = 0
Query:    1 VSRGYKNWGQLAAHMPGRTSKQCRERWIHHLDPAINKSDYTAEEDAKILALQKDLGNKWSQIALHLPGRTENAIKIRW 78
            V+ G KNWGQ+A+H+PGRTSKQCRERW +HLDP INK +YT EED  I+ +Q  LGN+WS IA  L GRTE+A+KIRW
Sbjct:  164 VAEGRKNWGQVASHIPGRTSKQCRERWCNHLDPNINKGNYTREEDQLIIDMQAKLGNRWSVIAQQLTGRTEDAVKIRW 241          
BLAST of jgi.p|Trimin1|134141 vs. uniprot
Match: D0NJN5_PHYIT (Myb-like DNA-binding protein, putative n=2 Tax=Phytophthora TaxID=4783 RepID=D0NJN5_PHYIT)

HSP 1 Score: 115 bits (287), Expect = 4.540e-30
Identity = 50/78 (64.10%), Postives = 61/78 (78.21%), Query Frame = 0
Query:    1 VSRGYKNWGQLAAHMPGRTSKQCRERWIHHLDPAINKSDYTAEEDAKILALQKDLGNKWSQIALHLPGRTENAIKIRW 78
            V+ G KNWGQ+A  +PGRTSKQCRERW +HLDP+I + +Y+ EED  IL  Q  LGN+WS IA  LPGRTE+A+KIRW
Sbjct:  149 VAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIIRGEYSPEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRW 226          
BLAST of jgi.p|Trimin1|134141 vs. uniprot
Match: D8LSJ8_ECTSI (Myb-like DNA-binding protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSJ8_ECTSI)

HSP 1 Score: 120 bits (301), Expect = 5.510e-30
Identity = 50/78 (64.10%), Postives = 62/78 (79.49%), Query Frame = 0
Query:    1 VSRGYKNWGQLAAHMPGRTSKQCRERWIHHLDPAINKSDYTAEEDAKILALQKDLGNKWSQIALHLPGRTENAIKIRW 78
            V +G++NWGQ+A+ M GRTSKQCRERW HHLDPA+ K  YT EED  I+ LQ ++GN+W+ IA  L GRTENA+KIRW
Sbjct:  167 VEKGFRNWGQVASFMDGRTSKQCRERWCHHLDPAVRKGGYTTEEDELIIFLQGEVGNRWADIAKRLTGRTENAVKIRW 244          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|134141 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z1Q6_9STRA2.690e-54100.00Homeodomain-like protein (Fragment) n=1 Tax=Tribon... [more]
A0A7S2UU49_9STRA2.140e-3875.64Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S2UZV2_9STRA1.930e-3476.71Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
H3G911_PHYRM1.190e-3165.38Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A6H5K458_9PHAE1.130e-3066.67MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A418B0H6_9STRA4.020e-3066.67Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
D7FQG8_ECTSI4.070e-3066.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6G0XBC5_9STRA4.260e-3066.67Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
D0NJN5_PHYIT4.540e-3064.10Myb-like DNA-binding protein, putative n=2 Tax=Phy... [more]
D8LSJ8_ECTSI5.510e-3064.10Myb-like DNA-binding protein, putative n=2 Tax=Ect... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 36..78
e-value: 3.1E-5
score: 33.4
coord: 2..33
e-value: 27.0
score: 5.0
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 1..31
score: 7.479793
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 32..78
score: 9.488739
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 40..78
e-value: 4.95374E-9
score: 45.259
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 4..31
e-value: 5.75686E-7
score: 39.8662
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 4..30
e-value: 8.6E-7
score: 29.1
coord: 38..78
e-value: 5.8E-11
score: 42.4
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 1..31
score: 11.700377
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 32..78
score: 19.644434
NoneNo IPR availableGENE3D1.10.10.60coord: 2..36
e-value: 9.0E-13
score: 50.0
NoneNo IPR availableGENE3D1.10.10.60coord: 39..78
e-value: 9.6E-15
score: 56.3
NoneNo IPR availablePANTHERPTHR45614:SF152SUBFAMILY NOT NAMEDcoord: 4..78
NoneNo IPR availablePANTHERPTHR45614MYB PROTEIN-RELATEDcoord: 4..78
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 11..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_22contigContig_22:572523..574777 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|134141mRNA_6376Tribonema minus UTEX_B_3156 mRNAContig_22 572523..574777 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|134141|gw1.22.31.1 ID=Trimin1|134141|gw1.22.31.1|Name=jgi.p|Trimin1|134141|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=78bp
VSRGYKNWGQLAAHMPGRTSKQCRERWIHHLDPAINKSDYTAEEDAKILA
LQKDLGNKWSQIALHLPGRTENAIKIRW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeobox-like_sf