Trimin1|133750|gw1.20.58.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|133750
Unique NameTrimin1|133750|gw1.20.58.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length269
Homology
BLAST of jgi.p|Trimin1|133750 vs. uniprot
Match: A0A835Z233_9STRA (RanBP2-type domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z233_9STRA)

HSP 1 Score: 427 bits (1098), Expect = 1.750e-149
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0
Query:    1 REAFEALDDAGGGSSIAAARFPELFEQLGTTYNEEAHTKTLQRLQDGGGRVPRDAFMEWYVEWLLGGDDDASSDGESEEAEREEERAKVREAFAALDDATSGSSIAAAQFPELFEQLGTTYNEEAHTKTLLRLQDGSGRVPRDAFMEWYVEWLLGGDXXXXXXXXXXXXXXXXXXXXXXXXXXGAGFGDMFKAAAGEWKCEACLVRNAPGAAKCASCETPAAGGKAAAXXGXXXXXXXXXXXXXXXSGIGPSGFSFGAPVSAAAGFSFG 269
            REAFEALDDAGGGSSIAAARFPELFEQLGTTYNEEAHTKTLQRLQDGGGRVPRDAFMEWYVEWLLGGDDDASSDGESEEAEREEERAKVREAFAALDDATSGSSIAAAQFPELFEQLGTTYNEEAHTKTLLRLQDGSGRVPRDAFMEWYVEWLLGGDXXXXXXXXXXXXXXXXXXXXXXXXXXGAGFGDMFKAAAGEWKCEACLVRNAPGAAKCASCETPAAGGKAAAXXGXXXXXXXXXXXXXXXSGIGPSGFSFGAPVSAAAGFSFG
Sbjct:    1 REAFEALDDAGGGSSIAAARFPELFEQLGTTYNEEAHTKTLQRLQDGGGRVPRDAFMEWYVEWLLGGDDDASSDGESEEAEREEERAKVREAFAALDDATSGSSIAAAQFPELFEQLGTTYNEEAHTKTLLRLQDGSGRVPRDAFMEWYVEWLLGGDXXXXXXXXXXXXXXXXXXXXXXXXXXGAGFGDMFKAAAGEWKCEACLVRNAPGAAKCASCETPAAGGKAAAXXGXXXXXXXXXXXXXXXSGIGPSGFSFGAPVSAAAGFSFG 269          
BLAST of jgi.p|Trimin1|133750 vs. uniprot
Match: A0A835Z9Q0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Q0_9STRA)

HSP 1 Score: 162 bits (411), Expect = 1.810e-43
Identity = 142/186 (76.34%), Postives = 148/186 (79.57%), Query Frame = 0
Query:   79 EAEREEERAKVREAFAALDDATSGSSIAAAQFPELFEQLGTTYNEEAHTKTLLRLQDGSGRVPRDAFMEWYVEWLLGGDXXXXXXXXXXXXXXXXXXXXXXXXXXGA---GFGDMFKAAAGEWKCEACLVRNAPGAAKCASCETPAAGGKAAAXXGXXXXXXXXXXXXXXXSG----IGPSGFSFG 257
            EAE   ERAKVR AFAAL++     SIAAAQF ELFE LGTTYNEEAHTKTL RLQDG+GRVP DAF++WY+EWLLG  XXXXXXXXXXXXXXXXXXXXXXXXXX     GFGDMFKA AGEWKCEACLVRN P A KC SCETP  G  A AXX XXXXXXXXXXXXXXX      IGPSGF FG
Sbjct:  127 EAEXXXERAKVRGAFAALNEGXXXXSIAAAQFAELFEALGTTYNEEAHTKTLRRLQDGAGRVPLDAFLDWYIEWLLGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQGFGDMFKAVAGEWKCEACLVRNPPTAVKCVSCETPGPGAAAEAXXXXXXXXXXXXXXXXXXXXXXXXIGPSGFHFG 312          
BLAST of jgi.p|Trimin1|133750 vs. uniprot
Match: A0A835ZBV9_9STRA (RanBP2-type domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBV9_9STRA)

HSP 1 Score: 140 bits (353), Expect = 2.480e-38
Identity = 111/142 (78.17%), Postives = 115/142 (80.99%), Query Frame = 0
Query:  117 LGTTYNEEAHTKTLLRLQDGSGRVPRDAFMEWYVEWLLGGDXXXXXXXXXXXXXXXXXXXXXXXXXXGAGFGDMFKAAAGEWKCEACLVRNAPGAAKCASCETPAAGGKAAAXXGXXXXXXXXXXXXXXXSG--IGPSGFSF 256
            LGTTYNEEAHTKTL RLQD +GRV  DAF +WYVEWLLGGD       XXXXXXXXXXXXXXXXXX GAGFGDMFKAAAGEWKC+ACLVRNAPGA KCASCETPAAG  A  XX XXXXXXXXXX     +G  I PSGFSF
Sbjct:    1 LGTTYNEEAHTKTLQRLQDAAGRVHLDAFTDWYVEWLLGGDDEASSDGXXXXXXXXXXXXXXXXXX-GAGFGDMFKAAAGEWKCDACLVRNAPGATKCASCETPAAGAVAXXXXXXXXXXXXXXXGHASTAGGSISPSGFSF 141          
BLAST of jgi.p|Trimin1|133750 vs. uniprot
Match: A0A7S4E7X3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E7X3_9STRA)

HSP 1 Score: 128 bits (322), Expect = 1.560e-31
Identity = 116/259 (44.79%), Postives = 151/259 (58.30%), Query Frame = 0
Query:    1 REAFEALDDAGGGSSIAAARFPELFEQLGTTYNEEAHTKTLQRLQDGGGRVPRDAFMEWYVEWLLGGDDDASSDGESEEAEREEERAKVREAFAALDDATSGSSIAAAQFPELFEQLGTTYNEEAHTKTLLRLQDGSGRVPRDAFMEWYVEWLLG-GDXXXXXXXXXXXXXXXXXXXXXXXXXXGAGFGDMFKAAAGEWKCEACLVRNAPGAAKCASCETPAAGGKAAAXXGXXXXXXXXXXXXXXXSGIGPSGFSFGA 258
            R AF+ +D A  GS +   RF +L + +G  ++ +       ++ DG G++ R+AF  +YV  +   D   +SD   +E EREEER   REAF  + D  +   + +++F  L E LGTTY EE H +TL +L  G G V RDAF+EWYV+W+LG GD  XXXXXXXXXXX              A +  +  A  G WKCE C VRN   A+KCA+CETP           XXXXXXXXXXXXXXX  +GP GFSFG+
Sbjct:   49 RSAFDDVDAATSGS-LPVDRFEDLLDAVGEGFHGDELEAQRAKVDDGSGKITREAFARYYVALVENAD---ASDDSGDEEEREEERGNAREAFDTVADGKT--EVPSSKFQALMEALGTTYCEEEHRRTLRKLAPG-GTVARDAFVEWYVDWVLGDGDSDXXXXXXXXXXXPAAESKAA------ATWASLTAAKEGSWKCEVCDVRNDKDASKCAACETP--------NPAXXXXXXXXXXXXXXXXSVGPGGFSFGS 286          
BLAST of jgi.p|Trimin1|133750 vs. uniprot
Match: A0A662XY18_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XY18_9STRA)

HSP 1 Score: 129 bits (324), Expect = 4.210e-30
Identity = 100/249 (40.16%), Postives = 124/249 (49.80%), Query Frame = 0
Query:    6 ALDDAGGGSSIAAARFPELFEQLGTTYNEEAHTKTLQRLQDGGGRVPRDAFMEWYVEWLLGGDDD----------------------------ASSDGES--EEAEREEERAKVREAFAALDDATSGSS-IAAAQFPELFEQLGTTYNEEAHTKTLLRLQDGSGRVPRDAFMEWYVEWLLG---GDXXXXXXXXXXXXXXXXXXXXXXXXXXGAGFGDMFKAAAGEWKCEACLVRNAPGAAKCASCETP 220
            A DDA     I    FP LF+ LG+TY+EEAH KTL+RL   G    RD F+ WYV++L   D+                             A SDG+   ++AER+EE  KVR+AF ++  AT G+  I    FP+LF+ LG TY+EEAH  TL +L  G G+V    F+ WYV+WL G    DXXXXXXX                    A     F    G WKC  C+V N P A KC SCETP
Sbjct:  614 ASDDA---DYIDVKHFPRLFKALGSTYSEEAHAKTLERLDKDGKVYERD-FIPWYVDYLFNDDESDEDEEASKSAAPKKQVSHAYGQNDENQFAESDGDETDDDAERKEEEDKVRKAFRSI--ATDGADYIEVEHFPKLFKTLGATYSEEAHVNTLQKLDKG-GKVYERDFISWYVDWLFGDGDSDXXXXXXXDSAATTGTKKTDMKSKEEIAAAL-SKFMPKEGSWKCAVCMVSNGPDATKCTSCETP 854          
BLAST of jgi.p|Trimin1|133750 vs. uniprot
Match: A0A8J2SJ63_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJ63_9STRA)

HSP 1 Score: 128 bits (322), Expect = 7.660e-30
Identity = 116/259 (44.79%), Postives = 151/259 (58.30%), Query Frame = 0
Query:    1 REAFEALDDAGGGSSIAAARFPELFEQLGTTYNEEAHTKTLQRLQDGGGRVPRDAFMEWYVEWLLGGDDDASSDGESEEAEREEERAKVREAFAALDDATSGSSIAAAQFPELFEQLGTTYNEEAHTKTLLRLQDGSGRVPRDAFMEWYVEWLLG-GDXXXXXXXXXXXXXXXXXXXXXXXXXXGAGFGDMFKAAAGEWKCEACLVRNAPGAAKCASCETPAAGGKAAAXXGXXXXXXXXXXXXXXXSGIGPSGFSFGA 258
            R AF+ +D A  GS +   RF +L + +G  ++ +       ++ DG G++ R+AF  +YV  +   D   +SD   +E EREEER   REAF  + D  +   + +++F  L E LGTTY EE H +TL +L  G G V RDAF+EWYV+W+LG GD  XXXXXXXXXXX              A +  +  A  G WKCE C VRN   A+KCA+CETP           XXXXXXXXXXXXXXX  +GP GFSFG+
Sbjct:  889 RSAFDDVDAATSGS-LPVDRFEDLLDAVGEGFHGDELEAQRAKVDDGSGKITREAFARYYVALVENAD---ASDDSGDEEEREEERGNAREAFDTVADGKT--EVPSSKFQALMEALGTTYCEEEHRRTLRKLAPG-GTVARDAFVEWYVDWVLGDGDSDXXXXXXXXXXXPAAESKAA------ATWASLTAAKEGSWKCEVCDVRNDKDASKCAACETP--------NPAXXXXXXXXXXXXXXXXSVGPGGFSFGS 1126          
BLAST of jgi.p|Trimin1|133750 vs. uniprot
Match: A0A1Z5KBE2_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBE2_FISSO)

HSP 1 Score: 122 bits (306), Expect = 9.000e-28
Identity = 81/227 (35.68%), Postives = 113/227 (49.78%), Query Frame = 0
Query:    2 EAFEALDDAGGGSSIAAARFPELFEQLGTT-YNEEAHTKTLQRLQDGGGRVPRDAFMEWYVEWLLGGDDDASSDGESEEAEREE-ERAKVREAFAALDDATSG-SSIAAAQFPELFEQLGTTYNEEAHTKTLLRLQDGSGRVPRDAFMEWYVEWLLGGDXXXXXXXXXXXXXXXXXXXXXXXXXXGAGFGDMFKAAAGEWKCEACLVRNAPGAAKCASCETPAAGGK 225
            EAF+ +D    G  +   +  +L E LG   Y +E   +T    +D  G + R AF++WYV+ L GGDD           +REE ERA+ +  F  L    +G  SI+   FP+L E LGTTY EE H +T+ +L+D SG +  +AF+ WY++WL GGD                          G G+G++FKA  G WKC  C+V N     KC +CE    G K
Sbjct:  690 EAFDTIDSDKKGI-LPLNKMEDLIENLGEGFYGDELAKQTKLVDKDDKGHLERQAFIDWYVQLLSGGDDXXXXXXXXXXXQREERERAQAK--FQELSSIRNGVRSISEMDFPKLIESLGTTYCEEEHRRTIRKLKDSSGIITENAFVSWYIDWLFGGDESDVEDSEEEEDEVDGVVTNELVAT-GTGWGNIFKAEEGSWKCSVCMVLNPGETGKCKACEAVRPGTK 912          
BLAST of jgi.p|Trimin1|133750 vs. uniprot
Match: A0A7S3ZVY8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZVY8_9STRA)

HSP 1 Score: 115 bits (287), Expect = 1.500e-26
Identity = 100/261 (38.31%), Postives = 134/261 (51.34%), Query Frame = 0
Query:    1 REAFEALDDAGGGSSIAAARFPELFEQLGTTYNEEAHTKTLQRLQDGGGRVPRDAFMEWYVEWLLG-GDDDASSDGESEEAEREEERAKVREAFAALDDATSGSSIAAAQFPELFEQLGTTYNEEAHTKTLLRLQDGSGRVPRDAFMEWYVEWLLG-GDXXXXXXXXXXXXXXXXXXXXXXXXXXGAGFGDMFKAAAGEWKCEACLVRNAPGAAKCASCETP--AAGGKAAAXXGXXXXXXXXXXXXXXXSGIGPSGFSFG 257
            R AF+ +D +G    +   RF +L + +G  ++ +       ++ DG GR+ R+AF  +YV      G+DD+           +      REAF  + D    +S+ +++F  L E LGTTY EE H +TL +L  G G V RDAF+EWYV+W+LG GD  XXXXXXXXXXX              A +  +  A  G WKCE C VRN   A+KCA+CETP  AA  KAAA                    +GP GFSFG
Sbjct:   49 RSAFDEVDSSG---VVPVDRFEDLLDSVGEGFHGDELEAQRAKVDDGSGRITREAFARYYVALCANVGEDDSDXXXXXXXXXSQ----SAREAFDTVAD--GATSVPSSKFQALMEALGTTYCEEEHRRTLRKLAPG-GTVARDAFVEWYVDWVLGDGDSDXXXXXXXXXXXPAAESKAA------ATWASLTAAKEGSWKCEVCDVRNDKDASKCAACETPNPAAPQKAAASGNAVSAP----------GSVGPGGFSFG 283          
BLAST of jgi.p|Trimin1|133750 vs. uniprot
Match: A0A7S2L9X9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L9X9_9STRA)

HSP 1 Score: 118 bits (295), Expect = 2.520e-26
Identity = 107/240 (44.58%), Postives = 140/240 (58.33%), Query Frame = 0
Query:    3 AFEALDDAGGGSSIAAARFPELFEQLGTTYNEEAHTKTLQRLQ-DGGGRVPRDAFMEWYVEWLLGGDDDASSDG--------ESEEAEREEERAKVREAFAALDDATSGSSIAAAQFPELFEQLGTTYNEEAHTKTLLRLQDGSGRVPRDAFMEWYVEWLLG-GDXXXXXXXXXXXXXXXXXXXXXXXXXXGA---------GFGDMFKAAAGEWKCEACLVRNAPGAAKCASCETPAAG 223
            AF+ +D  G G  +A++ F  L E LG  +  +   K L  +  +  G + R +F+ WYV  + G +DD   DG          E AER EE  K+  AFA L+D  +  SI  A F +L E +GT Y EEAH +T+ +L D SG + +DAF  WY++WL G GD XXXXXXXXXXXXXXXXXXXXXXXXX            +G +F   AG WKC++C+V+N P  A C +CETP  G
Sbjct:  221 AFDDIDTDGKGE-VASSLFGLLLESLGEGFYGDELDKQLSLVDPESTGIICRSSFIGWYVHLVEGCEDDEGKDGVDDSSSLDTDERAERAEELEKISVAFAELNDGKNVQSIKTADFGQLMEAMGTAYCEEAHRRTVKKL-DNSGIITQDAFTGWYIDWLFGDGDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSWGGIFATEAGSWKCDSCMVKNKPDVADCVACETPRPG 458          
BLAST of jgi.p|Trimin1|133750 vs. uniprot
Match: A0A7S4HSE8_9STRA (Hypothetical protein (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HSE8_9STRA)

HSP 1 Score: 109 bits (272), Expect = 3.010e-23
Identity = 70/196 (35.71%), Postives = 97/196 (49.49%), Query Frame = 0
Query:   72 SSDGESEEAEREEERAKVREAFAALDDATSGSSIAAAQFPELFEQLGTTYNEEAHTKTLLRLQDGSGRVPRDAFMEWYVEWLLGGDXXXXXXXXXXXXXXXXXXXXXXXXXXGAGFGDMFKAAAGE---WKCEACLVRNAPGAAKCASCETPAAGGKAAAXXGXXXXXXXXXXXXXXXSGIGPSGFSFGAPVSAAA 264
            ++D E  E E+ EER K  EAFA++  ++ G +I    FP+L E +GTTY EE H +TL +L    G+V +D F+EWY++WL G +                            G+GD FK+  G+   WKC+ C+VRN P   KCA+CE    G +  A                    IG  GF+FGAP +AAA
Sbjct:  749 TADREEMEEEKAEEREKALEAFASM--SSDGEAIPKEDFPKLIEGMGTTYCEEEHRRTLRKLAGPDGKVRKDEFVEWYLDWLFGDEDEDEEYSDKEDEEEPGEGTREGSVASNKGWGDAFKSTEGKEGSWKCDVCMVRNDPDLVKCAACEMVRPGHEEEANA------KEGGGAGAAAGAIGAGGFTFGAPPAAAA 936          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|133750 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
A0A835Z233_9STRA1.750e-149100.00RanBP2-type domain-containing protein (Fragment) n... [more]
A0A835Z9Q0_9STRA1.810e-4376.34Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZBV9_9STRA2.480e-3878.17RanBP2-type domain-containing protein (Fragment) n... [more]
A0A7S4E7X3_9STRA1.560e-3144.79Hypothetical protein (Fragment) n=1 Tax=Pelagomona... [more]
A0A662XY18_9STRA4.210e-3040.16Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A8J2SJ63_9STRA7.660e-3044.79Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A1Z5KBE2_FISSO9.000e-2835.68Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A7S3ZVY8_9STRA1.500e-2638.31Hypothetical protein (Fragment) n=1 Tax=Pelagomona... [more]
A0A7S2L9X9_9STRA2.520e-2644.58Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S4HSE8_9STRA3.010e-2335.71Hypothetical protein (Fragment) n=2 Tax=Odontella ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001876Zinc finger, RanBP2-typeSMARTSM00547zf_4coord: 196..220
e-value: 3.0E-5
score: 33.4
IPR001876Zinc finger, RanBP2-typePFAMPF00641zf-RanBPcoord: 195..221
e-value: 3.6E-7
score: 29.4
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 198..217
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 194..223
score: 9.879186
NoneNo IPR availableGENE3D4.10.1060.10coord: 191..229
e-value: 2.2E-10
score: 41.6
NoneNo IPR availableGENE3D1.10.238.10coord: 1..153
e-value: 3.3E-10
score: 41.7
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 195..220
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 1..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_20contigContig_20:542342..546298 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|133750mRNA_4102Tribonema minus UTEX_B_3156 mRNAContig_20 542342..546298 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|133750|gw1.20.58.1 ID=Trimin1|133750|gw1.20.58.1|Name=jgi.p|Trimin1|133750|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=269bp
REAFEALDDAGGGSSIAAARFPELFEQLGTTYNEEAHTKTLQRLQDGGGR
VPRDAFMEWYVEWLLGGDDDASSDGESEEAEREEERAKVREAFAALDDAT
SGSSIAAAQFPELFEQLGTTYNEEAHTKTLLRLQDGSGRVPRDAFMEWYV
EWLLGGDDDASSDGGSTTAGDTGGSSGGAAAAAGAGFGDMFKAAAGEWKC
EACLVRNAPGAAKCASCETPAAGGKAAAAAGAASGAGAARTASAAGSGIG
PSGFSFGAPVSAAAGFSFG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001876Znf_RanBP2
IPR036443Znf_RanBP2_sf
IPR011992EF-hand-dom_pair