Trimin1|133730|gw1.91.27.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|133730
Unique NameTrimin1|133730|gw1.91.27.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length122
Homology
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BLAST of jgi.p|Trimin1|133730 vs. uniprot
Match: A0A835YKW5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKW5_9STRA)

HSP 1 Score: 242 bits (617), Expect = 5.640e-81
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0 
Query:    1 RDNMLTSLSGVSSLRHLQSLNACNNSITSIDDTWDLPGASDSSSLTCLDLSENNLQTLDGLCSPALARLRCLSVRHNELCTLPPTFGDLDVLEELDVSENAITSVAATYKMQHLRVLNCEHN 122
            RDNMLTSLSGVSSLRHLQSLNACNNSITSIDDTWDLPGASDSSSLTCLDLSENNLQTLDGLCSPALARLRCLSVRHNELCTLPPTFGDLDVLEELDVSENAITSVAATYKMQHLRVLNCEHN
Sbjct:    1 RDNMLTSLSGVSSLRHLQSLNACNNSITSIDDTWDLPGASDSSSLTCLDLSENNLQTLDGLCSPALARLRCLSVRHNELCTLPPTFGDLDVLEELDVSENAITSVAATYKMQHLRVLNCEHN 122
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|133730 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YKW5_9STRA5.640e-81100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00019LEURICHRPTcoord: 45..58
score: 54.21
coord: 89..102
score: 42.91
NoneNo IPR availablePANTHERPTHR47566FAMILY NOT NAMEDcoord: 2..122
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 2..122
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 66..88
e-value: 31.0
score: 9.2
coord: 43..64
e-value: 68.0
score: 6.4
coord: 14..36
e-value: 35.0
score: 8.8
coord: 89..111
e-value: 83.0
score: 5.7
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 15..79
e-value: 4.3E-8
score: 32.8
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 44..65
score: 7.696554
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 16..37
score: 7.527138
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 1..122
e-value: 1.8E-22
score: 81.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_91contigContig_91:587226..587732 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|133730mRNA_13533Tribonema minus UTEX_B_3156 mRNAContig_91 587226..587732 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|133730|gw1.91.27.1 ID=Trimin1|133730|gw1.91.27.1|Name=jgi.p|Trimin1|133730|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=122bp
RDNMLTSLSGVSSLRHLQSLNACNNSITSIDDTWDLPGASDSSSLTCLDL
SENNLQTLDGLCSPALARLRCLSVRHNELCTLPPTFGDLDVLEELDVSEN
AITSVAATYKMQHLRVLNCEHN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf