Trimin1|133391|gw1.29.23.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|133391
Unique Name	Trimin1\|133391\|gw1.29.23.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	98

Homology

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BLAST of jgi.p|Trimin1|133391 vs. uniprot
Match: A0A835Z6Z9_9STRA (HSF-type DNA-binding-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Z9_9STRA)

HSP 1 Score: 207 bits (527), Expect = 5.160e-68
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0

Query:    1 GKRGAPQAFPRRLYELLQEEDASVVSWIKNGEGFIINDMDTFVNTTLVKYFQHNKYTSFQRQCNLYGFRKITRGPDAGMYIHEHFKKGRLEDLVKVRR 98
            GKRGAPQAFPRRLYELLQEEDASVVSWIKNGEGFIINDMDTFVNTTLVKYFQHNKYTSFQRQCNLYGFRKITRGPDAGMYIHEHFKKGRLEDLVKVRR
Sbjct:    1 GKRGAPQAFPRRLYELLQEEDASVVSWIKNGEGFIINDMDTFVNTTLVKYFQHNKYTSFQRQCNLYGFRKITRGPDAGMYIHEHFKKGRLEDLVKVRR 98

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BLAST of jgi.p|Trimin1|133391 vs. uniprot
Match: A0A835Z401_9STRA (HSF-type DNA-binding-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z401_9STRA)

HSP 1 Score: 167 bits (424), Expect = 1.740e-46
Identity = 74/98 (75.51%), Postives = 83/98 (84.69%), Query Frame = 0

Query:    1 GKRGAPQAFPRRLYELLQEEDASVVSWIKNGEGFIINDMDTFVNTTLVKYFQHNKYTSFQRQCNLYGFRKITRGPDAGMYIHEHFKKGRLEDLVKVRR 98
            GKRGAPQAFPRRLYE+LQEED S+VSW+K GEGF +N+M  F N TLV YF+HN YTSFQRQCNLYGF+K+TRGPD GMY HEHFK GR EDL  +RR
Sbjct:   58 GKRGAPQAFPRRLYEILQEEDPSIVSWVKGGEGFKVNNMHLFANKTLVNYFRHNNYTSFQRQCNLYGFKKLTRGPDTGMYYHEHFKAGRYEDLNNIRR 155

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BLAST of jgi.p|Trimin1|133391 vs. uniprot
Match: A0A7S2G7U9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G7U9_9STRA)

HSP 1 Score: 128 bits (322), Expect = 2.200e-35
Identity = 57/98 (58.16%), Postives = 72/98 (73.47%), Query Frame = 0

Query:    1 GKRGAPQAFPRRLYELLQEEDASVVSWIKNGEGFIINDMDTFVNTTLVKYFQHNKYTSFQRQCNLYGFRKITRGPDAGMYIHEHFKKGRLEDLVKVRR 98
            G+RGAPQ FPR+LYE+L  E + V+ W  +G+ FII +M+ FVN  L+ YF+H KY+SFQRQ NLYGFRKI +GPD G Y HEHF + + E L  VRR
Sbjct:   99 GRRGAPQVFPRKLYEILTNERSDVIGWTSSGKSFIILEMEIFVNEILMNYFRHQKYSSFQRQLNLYGFRKIQKGPDTGAYAHEHFLRDQPESLTFVRR 196

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BLAST of jgi.p|Trimin1|133391 vs. uniprot
Match: A0A7S2CXJ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CXJ7_9STRA)

HSP 1 Score: 132 bits (333), Expect = 1.470e-34
Identity = 59/98 (60.20%), Postives = 73/98 (74.49%), Query Frame = 0

Query:    1 GKRGAPQAFPRRLYELLQEEDASVVSWIKNGEGFIINDMDTFVNTTLVKYFQHNKYTSFQRQCNLYGFRKITRGPDAGMYIHEHFKKGRLEDLVKVRR 98
            G+RGAPQ FPR+LYE+L  E + ++SW +NG  F+I +MD FVN  L+KYF+H KY+SFQRQ NLYGFRKI +GPD G Y HE F +     LVKVRR
Sbjct:   77 GRRGAPQVFPRKLYEILTLESSDIISWTENGTSFVIQEMDDFVNEILMKYFRHRKYSSFQRQLNLYGFRKIQKGPDTGAYAHEGFLRDDESQLVKVRR 174

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BLAST of jgi.p|Trimin1|133391 vs. uniprot
Match: A0A7S2BSE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BSE7_9STRA)

HSP 1 Score: 124 bits (310), Expect = 2.100e-34
Identity = 55/98 (56.12%), Postives = 71/98 (72.45%), Query Frame = 0

Query:    1 GKRGAPQAFPRRLYELLQEEDASVVSWIKNGEGFIINDMDTFVNTTLVKYFQHNKYTSFQRQCNLYGFRKITRGPDAGMYIHEHFKKGRLEDLVKVRR 98
            G+RGAPQ FPR+LYE+L  E   ++ W  +G+ FII +M+TFV   L+KYF+H KY+SFQRQ NLYGFRK+ +G D G Y HE F + + E L KVRR
Sbjct:    7 GRRGAPQVFPRKLYEILSTEREDIIGWTDSGKSFIIKEMETFVTNILMKYFRHQKYSSFQRQLNLYGFRKVQKGTDVGSYAHECFIRDQPELLTKVRR 104

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BLAST of jgi.p|Trimin1|133391 vs. uniprot
Match: A0A7R9YBQ9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBQ9_9STRA)

HSP 1 Score: 131 bits (329), Expect = 2.780e-34
Identity = 58/98 (59.18%), Postives = 76/98 (77.55%), Query Frame = 0

Query:    1 GKRGAPQAFPRRLYELLQEEDASVVSWIKNGEGFIINDMDTFVNTTLVKYFQHNKYTSFQRQCNLYGFRKITRGPDAGMYIHEHFKKGRLEDLVKVRR 98
            GKRGAPQ FPR+L+ELL++ED++V+ W + GE F+I DMDTF   +L +YF+H+K+TSFQRQ NLYGFRKI +G   G Y+H HF++   E L KVRR
Sbjct:   52 GKRGAPQVFPRKLFELLEKEDSAVIRWDEEGECFVIQDMDTFTRESLERYFKHHKFTSFQRQLNLYGFRKIAKGERCGYYVHPHFQRDHPEWLSKVRR 149

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BLAST of jgi.p|Trimin1|133391 vs. uniprot
Match: A0A7S2GMP7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GMP7_9STRA)

HSP 1 Score: 131 bits (329), Expect = 3.490e-34
Identity = 60/98 (61.22%), Postives = 74/98 (75.51%), Query Frame = 0

Query:    1 GKRGAPQAFPRRLYELLQEEDASVVSWIKNGEGFIINDMDTFVNTTLVKYFQHNKYTSFQRQCNLYGFRKITRGPDAGMYIHEHFKKGRLEDLVKVRR 98
            GKRGAPQAFPR+L+E+L  E   ++ W ++G  FII DM+TFV + L+KYF+H KY+SFQRQ NLYGFRK+  GPDAG Y H+ F K R E L KVRR
Sbjct:    1 GKRGAPQAFPRKLFEILSNEPIDIICWTESGLSFIITDMETFVTSILMKYFRHQKYSSFQRQLNLYGFRKVNMGPDAGAYAHDCFLKNRGELLGKVRR 98

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BLAST of jgi.p|Trimin1|133391 vs. uniprot
Match: A0A7S2R5C8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5C8_9STRA)

HSP 1 Score: 125 bits (314), Expect = 5.280e-32
Identity = 54/98 (55.10%), Postives = 72/98 (73.47%), Query Frame = 0

Query:    1 GKRGAPQAFPRRLYELLQEEDASVVSWIKNGEGFIINDMDTFVNTTLVKYFQHNKYTSFQRQCNLYGFRKITRGPDAGMYIHEHFKKGRLEDLVKVRR 98
            GKRGAPQ FPR+LYE+L  E    +SW ++G  F+I DM+TFV + L+KYF+H K++SFQRQ NLYGFRKI++G + G Y HE F + + + L  VRR
Sbjct:   69 GKRGAPQVFPRKLYEILDNESEDTISWTESGHSFVIKDMETFVTSVLMKYFRHQKFSSFQRQLNLYGFRKISKGTETGAYCHEFFARDQTDKLRLVRR 166

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BLAST of jgi.p|Trimin1|133391 vs. uniprot
Match: A0A7S2WU52_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WU52_9STRA)

HSP 1 Score: 123 bits (309), Expect = 5.380e-31
Identity = 57/98 (58.16%), Postives = 70/98 (71.43%), Query Frame = 0

Query:    1 GKRGAPQAFPRRLYELLQEEDASVVSWIKNGEGFIINDMDTFVNTTLVKYFQHNKYTSFQRQCNLYGFRKITRGPDAGMYIHEHFKKGRLEDLVKVRR 98
            GKRGAPQ F R+LYE+L  E    +SW  +G  F+I +MD FV   L+KYF+H KY+SFQRQ NLYGFRKI++G DAG Y HE F +G+ E L  VRR
Sbjct:  161 GKRGAPQVFARKLYEILDNEPPDAISWTTSGTSFVIKEMDAFVTCVLMKYFRHQKYSSFQRQLNLYGFRKISKGSDAGAYAHESFIRGQPELLHFVRR 258

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BLAST of jgi.p|Trimin1|133391 vs. uniprot
Match: A0A6V1QFS1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QFS1_HETAK)

HSP 1 Score: 121 bits (304), Expect = 7.350e-31
Identity = 55/98 (56.12%), Postives = 72/98 (73.47%), Query Frame = 0

Query:    1 GKRGAPQAFPRRLYELLQEEDASVVSWIKNGEGFIINDMDTFVNTTLVKYFQHNKYTSFQRQCNLYGFRKITRGPDAGMYIHEHFKKGRLEDLVKVRR 98
            G+RGAPQAF R+LYE+L+ E   ++SW   G  F + D+D F    L+KYF+H+K+ SFQRQ NLYGFRKITRG DAG Y H++F+KG+ + L  VRR
Sbjct:    7 GQRGAPQAFARKLYEILEVEPGDLLSWNAAGNAFFVRDIDRFSKEILMKYFRHSKFASFQRQLNLYGFRKITRGSDAGSYAHQYFRKGKPDLLSLVRR 104

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|133391 vs. uniprot

BLAST of jgi.p|Trimin1|133391 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835Z6Z9_9STRA	5.160e-68	100.00	HSF-type DNA-binding-domain-containing protein (Fr...	[more]
A0A835Z401_9STRA	1.740e-46	75.51	HSF-type DNA-binding-domain-containing protein n=1...	[more]
A0A7S2G7U9_9STRA	2.200e-35	58.16	Hypothetical protein (Fragment) n=1 Tax=Florenciel...	[more]
A0A7S2CXJ7_9STRA	1.470e-34	60.20	Hypothetical protein (Fragment) n=1 Tax=Dictyocha ...	[more]
A0A7S2BSE7_9STRA	2.100e-34	56.12	Hypothetical protein (Fragment) n=1 Tax=Dictyocha ...	[more]
A0A7R9YBQ9_9STRA	2.780e-34	59.18	Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi...	[more]
A0A7S2GMP7_9STRA	3.490e-34	61.22	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A7S2R5C8_9STRA	5.280e-32	55.10	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A7S2WU52_9STRA	5.380e-31	58.16	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A6V1QFS1_HETAK	7.350e-31	56.12	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000232	Heat shock factor (HSF)-type, DNA-binding	PRINTS	PR00056	HSFDOMAIN	coord: 46..58 score: 46.37 coord: 59..71 score: 68.35
IPR000232	Heat shock factor (HSF)-type, DNA-binding	SMART	SM00415	hsfneu3	coord: 5..98 e-value: 1.3E-12 score: 57.9
IPR000232	Heat shock factor (HSF)-type, DNA-binding	PFAM	PF00447	HSF_DNA-bind	coord: 9..98 e-value: 4.1E-23 score: 81.8
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 2..98 e-value: 1.4E-25 score: 91.6
IPR027725	Heat shock transcription factor family	PANTHER	PTHR10015	HEAT SHOCK TRANSCRIPTION FACTOR	coord: 3..93
None	No IPR available	PANTHER	PTHR10015:SF206	HEAT SHOCK TRANSCRIPTION FACTOR	coord: 3..93
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 6..98

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_29	contig	Contig_29:930013..930430 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|133391	mRNA_9609	Tribonema minus UTEX_B_3156	mRNA	Contig_29 930013..930430 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|133391|gw1.29.23.1 ID=Trimin1|133391|gw1.29.23.1|Name=jgi.p|Trimin1|133391|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=98bp
GKRGAPQAFPRRLYELLQEEDASVVSWIKNGEGFIINDMDTFVNTTLVKY
FQHNKYTSFQRQCNLYGFRKITRGPDAGMYIHEHFKKGRLEDLVKVRR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000232	HSF_DNA-bd
IPR036388	WH-like_DNA-bd_sf
IPR027725	HSF_fam
IPR036390	WH_DNA-bd_sf