Trimin1|133201|gw1.167.14.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|133201
Unique NameTrimin1|133201|gw1.167.14.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length158
Homology
BLAST of jgi.p|Trimin1|133201 vs. uniprot
Match: A0A835Z6J3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6J3_9STRA)

HSP 1 Score: 276 bits (706), Expect = 2.210e-93
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0
Query:    1 QGIKPNIRSWGALLDAIGKAGQVADMMAWYGEMLTSGGXXXXXXXXXXXXXXXXXXRELGVAEGIWREMRDRQLEPDVWSYAALITCYAMAKQPDKAEDVLAEMVQSATIKPNAITFNSIMKAYMNDKRLDEAERVIGRMRAAGVEPILGTWTGIIHA 158
            QGIKPNIRSWGALLDAIGKAGQVADMMAWYGEMLTSGGXXXXXXXXXXXXXXXXXXRELGVAEGIWREMRDRQLEPDVWSYAALITCYAMAKQPDKAEDVLAEMVQSATIKPNAITFNSIMKAYMNDKRLDEAERVIGRMRAAGVEPILGTWTGIIHA
Sbjct:    1 QGIKPNIRSWGALLDAIGKAGQVADMMAWYGEMLTSGGXXXXXXXXXXXXXXXXXXRELGVAEGIWREMRDRQLEPDVWSYAALITCYAMAKQPDKAEDVLAEMVQSATIKPNAITFNSIMKAYMNDKRLDEAERVIGRMRAAGVEPILGTWTGIIHA 158          
BLAST of jgi.p|Trimin1|133201 vs. uniprot
Match: A0A835Z5Z3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5Z3_9STRA)

HSP 1 Score: 205 bits (521), Expect = 8.690e-63
Identity = 123/158 (77.85%), Postives = 133/158 (84.18%), Query Frame = 0
Query:    1 QGIKPNIRSWGALLDAIGKAGQVADMMAWYGEMLTSGGXXXXXXXXXXXXXXXXXXRELGVAEGIWREMRDRQLEPDVWSYAALITCYAMAKQPDKAEDVLAEMVQSATIKPNAITFNSIMKAYMNDKRLDEAERVIGRMRAAGVEPILGTWTGIIHA 158
            QGIKPN  SWGALLDAIGKAGQVA+MMAWYGEML SG XXXXXXXXXXXXXXXXXX E G+ E IWR+M DRQLEPDV SY   I+CYA A QPD+AE VLAEM QSA +KPNA  FNS+M+AY+NDKRLDEAER+IGRMRAAGVEP   TW  IIHA
Sbjct:  119 QGIKPNAHSWGALLDAIGKAGQVAEMMAWYGEMLASGXXXXXXXXXXXXXXXXXXXXEPGIVERIWRDMLDRQLEPDVKSYNTRISCYATANQPDQAEGVLAEMCQSAAVKPNAFCFNSLMQAYINDKRLDEAERIIGRMRAAGVEPDFCTWRVIIHA 276          
BLAST of jgi.p|Trimin1|133201 vs. uniprot
Match: A0A836CEZ1_9STRA (PPR_long domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEZ1_9STRA)

HSP 1 Score: 190 bits (482), Expect = 4.100e-55
Identity = 100/170 (58.82%), Postives = 118/170 (69.41%), Query Frame = 0
Query:    2 GIKPNIRSWGALLDAIGKAGQVADMMAWYGEMLTSGGXXXXXXXXXXXXXXXXXXRELGVAEGIWREMRDRQLEPDVWSYAALITCYAMAKQPDKAEDVLAEMVQSATIKPNAITFNS-------------IMKAYMNDKRLDEAERVIGRMRAAGVEPILGTWTGIIHA 158
            GIK ++RSW  LL+AIG+AGQV +MMAWY EML SGG                   ELG+AEGIWREMRDRQL PDV +Y ALITCYA A+QPDKAE V+AEM QSA +KP+AI   S             +M+AY+ND+RLD+A+RVIGRMRAAG +PI GTWT II A
Sbjct:  227 GIKLDVRSWNVLLNAIGRAGQVTEMMAWYREMLKSGGLQPDTVLMTTLLDNAGKAGELGIAEGIWREMRDRQLAPDVKAYNALITCYATARQPDKAEQVIAEMCQSAAVKPDAIALTSCVPLNMLMDVCYNLMQAYINDERLDDADRVIGRMRAAGADPISGTWTTIICA 396          
BLAST of jgi.p|Trimin1|133201 vs. uniprot
Match: A0A836CEM5_9STRA (PPR_long domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEM5_9STRA)

HSP 1 Score: 186 bits (471), Expect = 2.370e-54
Identity = 100/184 (54.35%), Postives = 120/184 (65.22%), Query Frame = 0
Query:    1 QGIKPNIRSWGALLDAIGKAGQVADMMAWYGEMLTSGGXXXXXXXXXXXXXXXXXXRELGVAEGIWREMRDRQLEPDVWSYAALITCYAMAKQPDKAEDVLAEMVQSATIKPNAITFN--------------------------SIMKAYMNDKRLDEAERVIGRMRAAGVEPILGTWTGIIHA 158
            +GI+P+++SWGALL AIG+AGQ+A+MMA Y EM  +GG                   E+ +AEGIW EMRDRQL PDV +Y ALITCYA AKQPDK E VLAE ++SA +KP+AI F                           S+M+AY+N+KRLDEAERVIGRMRAAGVEPILGTW  IIHA
Sbjct:  119 EGIRPDLQSWGALLHAIGRAGQLAEMMACYREMCATGGVQPNLVIMTTLLDNAGKAGEVSIAEGIWSEMRDRQLAPDVKTYNALITCYATAKQPDKVEGVLAERIRSAAVKPDAIMFTRACADFRTVLSTMRPALLLVRPPCMVSLMQAYINNKRLDEAERVIGRMRAAGVEPILGTWRSIIHA 302          
BLAST of jgi.p|Trimin1|133201 vs. uniprot
Match: A0A836CK12_9STRA (PPR_long domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK12_9STRA)

HSP 1 Score: 159 bits (403), Expect = 1.840e-46
Identity = 81/116 (69.83%), Postives = 88/116 (75.86%), Query Frame = 0
Query:    2 GIKPNIRSWGALLDAIGKAGQVADMMAWYGEMLTSGGXXXXXXXXXXXXXXXXXXRELGVAEGIWREMRDRQLEPDVWSYAALITCYAMAKQPDKAEDVLAEMVQSATIKPNAITF 117
            G+KPN RSWGALLDAIG+AGQVA+MMAWY EMLTSGG                   ELG+AEGIWREMRDRQLEP+ +SY+A I CYA AKQPDKAE VL EMVQSATIKPNAI F
Sbjct:  103 GMKPNERSWGALLDAIGRAGQVAEMMAWYAEMLTSGGLQPNNVILNSMLAHAGTAGELGIAEGIWREMRDRQLEPNSYSYSAFINCYATAKQPDKAEGVLTEMVQSATIKPNAIAF 218          
BLAST of jgi.p|Trimin1|133201 vs. uniprot
Match: A0A835Z497_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z497_9STRA)

HSP 1 Score: 149 bits (377), Expect = 3.470e-43
Identity = 81/156 (51.92%), Postives = 93/156 (59.62%), Query Frame = 0
Query:    3 IKPNIRSWGALLDAIGKAGQVADMMAWYGEMLTSGGXXXXXXXXXXXXXXXXXXRELGVAEGIWREMRDRQLEPDVWSYAALITCYAMAKQPDKAEDVLAEMVQSATIKPNAITFNSIMKAYMNDKRLDEAERVIGRMRAAGVEPILGTWTGIIHA 158
            IKPN +SW  LL+AIG+AGQV +MMAWYGEM  +G                     + +AEGIWREMR+RQL+P V+ Y+A I CYAMAKQPDKAE+VLAEMVQSATIKPN                         RMRAAGV P   TW  IIHA
Sbjct:    1 IKPNAQSWNVLLNAIGRAGQVTEMMAWYGEMCQTG-EQPTVYTMTTLLANAGKAGAVSIAEGIWREMRERQLDPGVYGYSAFIKCYAMAKQPDKAEEVLAEMVQSATIKPNXXXXXXXXXXXXXXXXXXXXXXXXSRMRAAGVPPDQDTWKSIIHA 155          
BLAST of jgi.p|Trimin1|133201 vs. uniprot
Match: A0A835YY11_9STRA (PPR_long domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY11_9STRA)

HSP 1 Score: 146 bits (368), Expect = 6.900e-41
Identity = 78/158 (49.37%), Postives = 102/158 (64.56%), Query Frame = 0
Query:    1 QGIKPNIRSWGALLDAIGKAGQVADMMAWYGEMLTSGGXXXXXXXXXXXXXXXXXXRELGVAEGIWREMRDRQLEPDVWSYAALITCYAMAKQPDKAEDVLAEMVQSATIKPNAITFNSIMKAYMNDKRLDEAERVIGRMRAAGVEPILGTWTGIIHA 158
            QG++P+   W ALLDA+G+A Q+  M+A Y EML SG                    + GVAE IWREMR R++ P V SY AL+ CYA+A +P+KAE  LAEM QS T  P+AI + S+MKAY ++ RLDEA  +I RMRA+GV+P   TWT +I+A
Sbjct:   60 QGVRPHTSCWNALLDALGRAKQLDQMLATYREMLASG--------------------QSGVAEEIWREMRQRRMTPGVKSYGALVNCYAVAGEPEKAEAKLAEMRQSTTTAPDAIMYCSLMKAYFSNGRLDEAVLIIDRMRASGVQPTFDTWTTVINA 197          
BLAST of jgi.p|Trimin1|133201 vs. uniprot
Match: A0A836CDU9_9STRA (PPR_long domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDU9_9STRA)

HSP 1 Score: 145 bits (366), Expect = 9.400e-41
Identity = 82/158 (51.90%), Postives = 97/158 (61.39%), Query Frame = 0
Query:    1 QGIKPNIRSWGALLDAIGKAGQVADMMAWYGEMLTSGGXXXXXXXXXXXXXXXXXXRELGVAEGIWREMRDRQLEPDVWSYAALITCYAMAKQPDKAEDVLAEMVQSATIKPNAITFNSIMKAYMNDKRLDEAERVIGRMRAAGVEPILGTWTGIIHA 158
            +GIKP+  +WGALL+ IG AG V  M+A Y EM T G                    E+ +   +WREM  RQL PDV SY   I CYA  K P KAE+VLAEM+QSA I  +AI+FNS+MKAY    RL+EAE VI RMRAAGV+P    W GIIHA
Sbjct:   45 EGIKPSAPTWGALLNTIGTAGHVEKMLAKYKEMCTIG--PRPTVITMTTLLDHAGAGEVDIFNDLWREMHYRQLVPDVKSYNTRINCYATVKDPGKAEEVLAEMIQSAAITLDAISFNSLMKAYYCSGRLNEAELVIDRMRAAGVQPTADIWKGIIHA 200          
BLAST of jgi.p|Trimin1|133201 vs. uniprot
Match: A0A836CJ97_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ97_9STRA)

HSP 1 Score: 137 bits (345), Expect = 1.980e-38
Identity = 90/156 (57.69%), Postives = 102/156 (65.38%), Query Frame = 0
Query:    3 IKPNIRSWGALLDAIGKAGQVADMMAWYGEMLTSGGXXXXXXXXXXXXXXXXXXRELGVAEGIWREMRDRQLEPDVWSYAALITCYAMAKQPDKAEDVLAEMVQSATIKPNAITFNSIMKAYMNDKRLDEAERVIGRMRAAGVEPILGTWTGIIHA 158
            IKP ++SW  LLDAIG+AGQ A+MMAWYG+M  +G      XXXXXXXXXXXXX                            I CYA AK P KAE+VLAEMVQSATIKPNAITF S+MKAY+  +RLD+AE VI RMRAAGV+P L  W  IIHA
Sbjct:    1 IKPTVQSWNVLLDAIGRAGQAAEMMAWYGKMCQTG-EQPDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINCYATAKDPRKAEEVLAEMVQSATIKPNAITFTSVMKAYIKVQRLDDAEHVISRMRAAGVQPSLPAWKSIIHA 155          
BLAST of jgi.p|Trimin1|133201 vs. uniprot
Match: A0A835YWM4_9STRA (Smr domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWM4_9STRA)

HSP 1 Score: 145 bits (365), Expect = 2.570e-38
Identity = 86/191 (45.03%), Postives = 103/191 (53.93%), Query Frame = 0
Query:    1 QGIKPNIRSWGALLDAIGKAGQVADMMAWYGEMLTSGGXXXXXXXXXXXXXXXXXXRELGVAEGIWREMRDRQLEPDVWSYAALITCYAMAKQPDKAEDVLAEMVQSATIKPNAITFNS---------------------------------IMKAYMNDKRLDEAERVIGRMRAAGVEPILGTWTGIIHA 158
            QGIKP++RSW  LL+AIG+ GQVA                                 ELG+AEGIW EM + QL PDV +Y ALI CY  AKQPDKAE+VLAEM+QSA +KP+AI F S                                 +M+AY+N +RLD+AE VI RMRAAG EPIL TWT +I A
Sbjct:  195 QGIKPDVRSWNVLLNAIGRTGQVA-------------------------------AGELGIAEGIWSEMLEHQLAPDVKTYNALIMCYTTAKQPDKAEEVLAEMIQSAAVKPDAIMFTSAIGTLIRACADFRTVLSTMRPALLLVHPPRMISVMQAYINAERLDDAEGVISRMRAAGAEPILSTWTALIIA 354          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|133201 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z6J3_9STRA2.210e-93100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835Z5Z3_9STRA8.690e-6377.85Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CEZ1_9STRA4.100e-5558.82PPR_long domain-containing protein n=1 Tax=Tribone... [more]
A0A836CEM5_9STRA2.370e-5454.35PPR_long domain-containing protein n=1 Tax=Tribone... [more]
A0A836CK12_9STRA1.840e-4669.83PPR_long domain-containing protein (Fragment) n=1 ... [more]
A0A835Z497_9STRA3.470e-4351.92Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835YY11_9STRA6.900e-4149.37PPR_long domain-containing protein n=1 Tax=Tribone... [more]
A0A836CDU9_9STRA9.400e-4151.90PPR_long domain-containing protein n=1 Tax=Tribone... [more]
A0A836CJ97_9STRA1.980e-3857.69Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835YWM4_9STRA2.570e-3845.03Smr domain-containing protein n=1 Tax=Tribonema mi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 58..158
e-value: 7.0E-25
score: 90.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..57
e-value: 1.8E-10
score: 42.5
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 65..125
e-value: 1.1E-13
score: 51.0
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 9..37
e-value: 0.01
score: 16.0
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 9..42
e-value: 5.4E-5
score: 21.1
coord: 47..78
e-value: 1.9E-4
score: 19.4
coord: 115..147
e-value: 1.2E-7
score: 29.5
coord: 80..113
e-value: 1.5E-6
score: 26.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 6..41
score: 8.747175
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 113..147
score: 12.287675
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 77..111
score: 9.152743
NoneNo IPR availablePANTHERPTHR47941PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIALcoord: 2..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_167contigContig_167:237115..239097 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|133201mRNA_16958Tribonema minus UTEX_B_3156 mRNAContig_167 237115..239097 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|133201|gw1.167.14.1 ID=Trimin1|133201|gw1.167.14.1|Name=jgi.p|Trimin1|133201|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=158bp
QGIKPNIRSWGALLDAIGKAGQVADMMAWYGEMLTSGGVKPNIIIMTTLL
DNAGKARELGVAEGIWREMRDRQLEPDVWSYAALITCYAMAKQPDKAEDV
LAEMVQSATIKPNAITFNSIMKAYMNDKRLDEAERVIGRMRAAGVEPILG
TWTGIIHA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat