Trimin1|132963|gw1.61.33.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|132963
Unique NameTrimin1|132963|gw1.61.33.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length128
Homology
BLAST of jgi.p|Trimin1|132963 vs. uniprot
Match: A0A835YN26_9STRA (A1 cistron-splicing factor (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN26_9STRA)

HSP 1 Score: 270 bits (689), Expect = 9.150e-92
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0
Query:    1 GGFLVILDTPPGLHLGIDCRLHQTGPNFKGMKMIPQGLHLLYYGLSESEHQGMFFEVRAGSVQVLCWDAAAEDLVHGDKNLPQGALAELTAAVLRGELDANLGPYPIEAGAAWVNLSNCISERVLERC 128
            GGFLVILDTPPGLHLGIDCRLHQTGPNFKGMKMIPQGLHLLYYGLSESEHQGMFFEVRAGSVQVLCWDAAAEDLVHGDKNLPQGALAELTAAVLRGELDANLGPYPIEAGAAWVNLSNCISERVLERC
Sbjct:    1 GGFLVILDTPPGLHLGIDCRLHQTGPNFKGMKMIPQGLHLLYYGLSESEHQGMFFEVRAGSVQVLCWDAAAEDLVHGDKNLPQGALAELTAAVLRGELDANLGPYPIEAGAAWVNLSNCISERVLERC 128          
BLAST of jgi.p|Trimin1|132963 vs. uniprot
Match: A0A6H5JER9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JER9_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 7.750e-41
Identity = 67/128 (52.34%), Postives = 86/128 (67.19%), Query Frame = 0
Query:    1 GGFLVILDTPPGLHLGIDCRLHQTGPNFKGMKMIPQGLHLLYYGLSESEHQGMFFEVRAGSVQVLCWDAAAEDLVHGDKNLPQGALAELTAAVLRGELDANLGPYPIEAGAAWVNLSNCISERVLERC 128
            GG+ V L  PPG+  GID + ++TGP F+G+KMIP GLH  ++G  E E QG+FF    GSV    WD +AEDLV     LP GAL  L  +VLR E+D +LGP+P E  AAW NL+NC+++ VLERC
Sbjct:   13 GGYFVALGVPPGVEFGIDLKSYKTGPQFQGVKMIPPGLHFAHFGTGEGEKQGIFFRSSVGSVAATQWDTSAEDLVDAQTRLPDGALRALRESVLRLEMDKSLGPHPFEQQAAWSNLTNCVTDSVLERC 140          
BLAST of jgi.p|Trimin1|132963 vs. uniprot
Match: D8LCU7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCU7_ECTSI)

HSP 1 Score: 150 bits (378), Expect = 1.710e-40
Identity = 68/128 (53.12%), Postives = 88/128 (68.75%), Query Frame = 0
Query:    1 GGFLVILDTPPGLHLGIDCRLHQTGPNFKGMKMIPQGLHLLYYGLSESEHQGMFFEVRAGSVQVLCWDAAAEDLVHGDKNLPQGALAELTAAVLRGELDANLGPYPIEAGAAWVNLSNCISERVLERC 128
            GG+ V L  PPG+  GID + ++TGP FKG+KMIP GLH  ++G  E E QG+FF   AGSV    WD +AEDLV     LP GA+  L  +VLR E+D +LGP+P E  AAW+NL+NC+++ VLERC
Sbjct:   18 GGYFVALGVPPGVEFGIDLKSYKTGPQFKGVKMIPPGLHFTHFGTGEGEKQGIFFRSSAGSVAATQWDTSAEDLVDAQTCLPDGAVRALRESVLRLEMDKSLGPHPFEQQAAWLNLTNCVTDSVLERC 145          
BLAST of jgi.p|Trimin1|132963 vs. uniprot
Match: A0A8J1XTY2_OWEFU (Protein AAR2 homolog n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1XTY2_OWEFU)

HSP 1 Score: 97.4 bits (241), Expect = 1.580e-21
Identity = 53/132 (40.15%), Postives = 72/132 (54.55%), Query Frame = 0
Query:    1 GGFLVILDTPPGLHLGIDCRLHQTGPNFKGMKMIPQGLHLLYY------GLSESEHQGMFFEVRAGSVQVLCWDAAAEDLVHGDKNLPQGALAELTAAVLRGELDANLGPYPIEAGAAWVNLSNCISERVLE 126
            G  LV+LD PPG   GID     TGPNFKG+KMIP G+H +YY      G   +   G F+  +A  V V  WD   ED+  G   + Q  +  + +   + ELD  LG YP E+   WV+++N I+E V+E
Sbjct:   13 GAVLVLLDVPPGTEFGIDYNAWNTGPNFKGVKMIPPGIHFVYYSARSGRGSDVAPRSGFFYNFKAKEVLVKKWDRLQEDITSG--GVSQEEVERIQSN--KKELDRYLGAYPYESYKKWVSMTNHITEPVME 140          
BLAST of jgi.p|Trimin1|132963 vs. uniprot
Match: A0A7S0Q5G2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q5G2_9EUKA)

HSP 1 Score: 93.2 bits (230), Expect = 5.890e-21
Identity = 55/126 (43.65%), Postives = 70/126 (55.56%), Query Frame = 0
Query:    2 GFLVILDTPPGLHLGIDCRLHQTGPNFKGMKMIPQGLHLLYYGLSESEHQGMFFEVRAGSVQVLCWDAAAEDLVHGDKNLPQGALAELTAAVLRGELDANLGPYPIEAGAAWVNLSNCISERVLER 127
            G +V    P     G+D R +  GP+FKGMKMIP GLHL+  G SE E  G+F  + AG V VL WD  AE   H     P      +   V + ELDANLGPYP+ + A W  LS+ +++ VL R
Sbjct:   22 GSIVCEVVPQSHEFGVDLRTYAIGPSFKGMKMIPPGLHLVVSG-SELESVGLFVRLLAGEVCVLEWDVQAEMPRH----TPVAEANAVAERVRKLELDANLGPYPLNSHAQWQALSSHLNDDVLAR 142          
BLAST of jgi.p|Trimin1|132963 vs. uniprot
Match: F7BCP7_MONDO (Protein AAR2 homolog n=6 Tax=Metatheria TaxID=9263 RepID=F7BCP7_MONDO)

HSP 1 Score: 95.1 bits (235), Expect = 1.340e-20
Identity = 55/136 (40.44%), Postives = 76/136 (55.88%), Query Frame = 0
Query:    1 GGFLVILDTPPGLHLGIDCRLHQTGPNFKGMKMIPQGLHLLYY--------GLSES-EHQGMFFEVRAGSVQVLCWDAAAEDLVHGDKNLPQGALAELTAAVLRGELDANLGPYPIEAGAAWVNLSNCISERVLER 127
            G  +V LD P G   GIDC   Q GP F+G+KMIP G+HL++Y        G  E+    G F  ++   +++L WDA+ E+L   D + P     E   A L+ ELD  LGPYP +    WV+LSNC+SE  ++R
Sbjct:   13 GATVVALDVPVGTEFGIDCSSWQVGPRFRGVKMIPPGVHLVHYSAAGRSPTGTRETGPRTGFFVTLQPRGLRLLRWDASREEL---DLSPPPEEQLEAARANLQ-ELDRFLGPYPYDRLKKWVSLSNCLSEETVQR 144          
BLAST of jgi.p|Trimin1|132963 vs. uniprot
Match: UPI001C3521BB ((large yellow croaker) hypothetical protein n=1 Tax=Larimichthys crocea TaxID=215358 RepID=UPI001C3521BB)

HSP 1 Score: 90.1 bits (222), Expect = 2.030e-20
Identity = 52/132 (39.39%), Postives = 67/132 (50.76%), Query Frame = 0
Query:    1 GGFLVILDTPPGLHLGIDCRLHQTGPNFKGMKMIPQGLHLLYY--------GLSESEHQGMFFEVRAGSVQVLCWDAAAEDLVHGDKNLPQGALAELTAAVLRGELDANLGPYPIEAGAAWVNLSNCISERV 124
            G FLV+L  P G  LGIDC+  Q GP FKG+KMIP GLH L+Y        G       G+F  ++   + +  WD   EDL   D +  Q             +LDA LGPYP E    WV+L++ +SE V
Sbjct:   10 GAFLVLLGVPQGTELGIDCKSWQVGPRFKGVKMIPPGLHFLHYCSVNKPSCGGEIGPKTGLFITLKPKEILLANWDPKEEDL---DFSASQNEEEVSRIRANLRDLDAFLGPYPYEVMRKWVSLTDRLSEEV 138          
BLAST of jgi.p|Trimin1|132963 vs. uniprot
Match: A0A7N4P721_SARHA (Protein AAR2 homolog n=1 Tax=Sarcophilus harrisii TaxID=9305 RepID=A0A7N4P721_SARHA)

HSP 1 Score: 94.0 bits (232), Expect = 3.560e-20
Identity = 56/137 (40.88%), Postives = 76/137 (55.47%), Query Frame = 0
Query:    1 GGFLVILDTPPGLHLGIDCRLHQTGPNFKGMKMIPQGLHLLYY--------GLSES-EHQGMFFEVRAGSVQVLCWDAAAEDLVHGDKNLPQGALAELTAAVLR-GELDANLGPYPIEAGAAWVNLSNCISERVLER 127
            G  +V LD P G   GIDC   Q GP F+G+KMIP G+HL++Y        G  E+    G F  +R  ++++L WDAA E+L     +L      +L AA  R  ELD  LGPYP +    WV+LS+C+SE  + R
Sbjct:   13 GATVVALDVPEGTEFGIDCGSWQVGPRFRGVKMIPPGVHLVHYSAAGRGPAGARETGPRTGFFVTLRPRALRLLRWDAAREEL-----DLSPPPEEQLAAARARLQELDRFLGPYPYDLLKKWVSLSSCLSEEAVRR 144          
BLAST of jgi.p|Trimin1|132963 vs. uniprot
Match: A7RIW5_NEMVE (Protein AAR2 homolog n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7RIW5_NEMVE)

HSP 1 Score: 92.4 bits (228), Expect = 1.020e-19
Identity = 50/135 (37.04%), Postives = 70/135 (51.85%), Query Frame = 0
Query:    1 GGFLVILDTPPGLHLGIDCRLHQTGPNFKGMKMIPQGLHLLYYGLSESE-----HQGMFFEVRAGSVQVLCWDAAAEDLVH---GDKNLPQGALAELTAAVLRGELDANLGPYPIEAGAAWVNLSNCISERVLER 127
            G F++ LD P G   GIDC   + GP FKG+KM+P G+H ++Y     E       G F   + G + V  WD A EDLV+    +++L +  L          ELD  LGPYP E    W++L++ IS  +L R
Sbjct:   13 GAFILCLDVPQGTEFGIDCNSWEVGPRFKGVKMVPPGIHFVFYSAVNREGNAAPRTGFFCVTKKGDIVVRKWDPAIEDLVNEKTSEEDLKKYRLG-------MKELDTYLGPYPFENHKKWLSLTSHISANILAR 140          
BLAST of jgi.p|Trimin1|132963 vs. uniprot
Match: A0A8C5E9K7_9TELE (Protein AAR2 homolog n=1 Tax=Gouania willdenowi TaxID=441366 RepID=A0A8C5E9K7_9TELE)

HSP 1 Score: 92.4 bits (228), Expect = 1.330e-19
Identity = 55/135 (40.74%), Postives = 69/135 (51.11%), Query Frame = 0
Query:    1 GGFLVILDTPPGLHLGIDCRLHQTGPNFKGMKMIPQGLHLLYY--------GLSESEHQGMFFEVRAGSVQVLCWDAAAEDL---VHGDKNLPQGALAELTAAVLRGELDANLGPYPIEAGAAWVNLSNCISERV 124
            G  LV+LD P G  LGIDC++ + GP FKG+KMIP GLH LYY        G       G+F  V+   V +  WD   EDL      D+       A L       ELD +LGPYP E    WV+L++ ISE +
Sbjct:   21 GATLVLLDVPKGTELGIDCKVWKVGPLFKGVKMIPPGLHFLYYSSVNSPTCGSEIGPRTGLFLSVKPKDVILAKWDQKEEDLDFSASQDEEQVNRIRANLR------ELDPHLGPYPFEVLRKWVSLTDRISEEM 149          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|132963 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YN26_9STRA9.150e-92100.00A1 cistron-splicing factor (Fragment) n=1 Tax=Trib... [more]
A0A6H5JER9_9PHAE7.750e-4152.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCU7_ECTSI1.710e-4053.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8J1XTY2_OWEFU1.580e-2140.15Protein AAR2 homolog n=1 Tax=Owenia fusiformis Tax... [more]
A0A7S0Q5G2_9EUKA5.890e-2143.65Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
F7BCP7_MONDO1.340e-2040.44Protein AAR2 homolog n=6 Tax=Metatheria TaxID=9263... [more]
UPI001C3521BB2.030e-2039.39(large yellow croaker) hypothetical protein n=1 Ta... [more]
A0A7N4P721_SARHA3.560e-2040.88Protein AAR2 homolog n=1 Tax=Sarcophilus harrisii ... [more]
A7RIW5_NEMVE1.020e-1937.04Protein AAR2 homolog n=2 Tax=Nematostella vectensi... [more]
A0A8C5E9K7_9TELE1.330e-1940.74Protein AAR2 homolog n=1 Tax=Gouania willdenowi Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007946A1 cistron-splicing factor, AAR2PFAMPF05282AAR2coord: 1..128
e-value: 8.1E-33
score: 114.2
IPR007946A1 cistron-splicing factor, AAR2PANTHERPTHR12689A1 CISTRON SPLICING FACTOR AAR2-RELATEDcoord: 1..128
IPR038516AAR2, N-terminal domain superfamilyGENE3D2.60.34.20coord: 3..128
e-value: 8.7E-24
score: 86.3
IPR033647AAR2, N-terminalCDDcd13777Aar2_Ncoord: 2..128
e-value: 1.54016E-35
score: 117.007

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_61contigContig_61:381826..382956 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|132963mRNA_8698Tribonema minus UTEX_B_3156 mRNAContig_61 381826..382956 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|132963|gw1.61.33.1 ID=Trimin1|132963|gw1.61.33.1|Name=jgi.p|Trimin1|132963|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=128bp
GGFLVILDTPPGLHLGIDCRLHQTGPNFKGMKMIPQGLHLLYYGLSESEH
QGMFFEVRAGSVQVLCWDAAAEDLVHGDKNLPQGALAELTAAVLRGELDA
NLGPYPIEAGAAWVNLSNCISERVLERC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007946AAR2
IPR038516AAR2_N_sf
IPR033647Aar2_N