Trimin1|132884|gw1.196.19.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|132884
Unique NameTrimin1|132884|gw1.196.19.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length95
Homology
BLAST of jgi.p|Trimin1|132884 vs. uniprot
Match: A0A835ZAL2_9STRA (Bromodomain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAL2_9STRA)

HSP 1 Score: 181 bits (460), Expect = 6.950e-58
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0
Query:    1 RRRLGAALEALSKERFAASFAAPVDLAAVYGYGATVALPMDLALILRRLEGNYYRGARALAHDCHLIIVNCLKFNLEDSGIARQSQRLASALAEV 95
            RRRLGAALEALSKERFAASFAAPVDLAAVYGYGATVALPMDLALILRRLEGNYYRGARALAHDCHLIIVNCLKFNLEDSGIARQSQRLASALAEV
Sbjct:    1 RRRLGAALEALSKERFAASFAAPVDLAAVYGYGATVALPMDLALILRRLEGNYYRGARALAHDCHLIIVNCLKFNLEDSGIARQSQRLASALAEV 95          
BLAST of jgi.p|Trimin1|132884 vs. uniprot
Match: A0A6H5KTA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTA2_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 1.600e-9
Identity = 37/91 (40.66%), Postives = 52/91 (57.14%), Query Frame = 0
Query:    4 LGAALEALSKERFAASFAAPVDLAAVYGYGATVALPMDLALILRRLEGNYYRGARALAHDCHLIIVNCLKFNLEDSGIARQSQRLASALAE 94
            L A +  +++   AA FA PVD+A    Y   V +PMDL LILRRLE +YY    AL  DC+L+  NC K+N   S I + +  ++  L +
Sbjct: 1523 LAAKVREVAESPDAALFAEPVDVA---DYHTIVPVPMDLGLILRRLEKDYYCSVEALEFDCNLVYDNCTKYNEPGSDIVKLAFTVSDQLVQ 1610          
BLAST of jgi.p|Trimin1|132884 vs. uniprot
Match: D8LEP1_ECTSI (WD-repeat protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEP1_ECTSI)

HSP 1 Score: 62.8 bits (151), Expect = 2.170e-9
Identity = 37/91 (40.66%), Postives = 51/91 (56.04%), Query Frame = 0
Query:    4 LGAALEALSKERFAASFAAPVDLAAVYGYGATVALPMDLALILRRLEGNYYRGARALAHDCHLIIVNCLKFNLEDSGIARQSQRLASALAE 94
            L A +  +++   AA FA PVD   V  Y   V +PMDL LILRRLE +YY    AL  DC+L+  NC K+N   S I + +  ++  L +
Sbjct: 1564 LAAKVREVAESPDAALFAEPVD---VVDYHTIVPVPMDLGLILRRLEKDYYCSVEALEFDCNLVYDNCTKYNEPGSDIVKLAFTVSDQLVQ 1651          
BLAST of jgi.p|Trimin1|132884 vs. uniprot
Match: A0A6F9D7L9_9ASCI (Bromodomain and WD repeat-containing protein 3 n=1 Tax=Phallusia mammillata TaxID=59560 RepID=A0A6F9D7L9_9ASCI)

HSP 1 Score: 58.2 bits (139), Expect = 9.130e-8
Identity = 34/90 (37.78%), Postives = 47/90 (52.22%), Query Frame = 0
Query:    3 RLGAALEALSKERFAASFAAPVDLAAVYGYGATVALPMDLALILRRLEGNYYRGARALAHDCHLIIVNCLKFNLEDSGIARQSQRLASAL 92
            R+  A+E L   +    F+ PVD      Y   V  P+DL+LILRRL+  +YR   +L  D  L+  N L FN  DS I + +Q L + L
Sbjct: 1216 RIACAIETLLNFKMFFQFSGPVDFKIYPTYVLAVPYPIDLSLILRRLQSRFYRRKASLVWDIELLSKNALAFNKSDSKIVKTAQFLENRL 1305          
BLAST of jgi.p|Trimin1|132884 vs. uniprot
Match: A0A6G0LMW6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0LMW6_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 2.820e-6
Identity = 30/77 (38.96%), Postives = 41/77 (53.25%), Query Frame = 0
Query:   16 FAASFAAPVDLAAVYGYGATVALPMDLALILRRLEGNYYRGARALAHDCHLIIVNCLKFNLEDSGIARQSQRLASAL 92
            F+  F  PVD      Y  +VA P+DL  I RRL   YYR   A   D  L+ +NC  +N+  S I++ S+ L SA+
Sbjct: 1169 FSRDFMCPVDEETFMDYPYSVANPIDLTKIQRRLRLGYYRQVEAFLADVKLLRINCETYNIPSSPISQNSRNLYSAV 1245          
BLAST of jgi.p|Trimin1|132884 vs. uniprot
Match: H3GMX0_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GMX0_PHYRM)

HSP 1 Score: 53.5 bits (127), Expect = 3.600e-6
Identity = 28/70 (40.00%), Postives = 38/70 (54.29%), Query Frame = 0
Query:   23 PVDLAAVYGYGATVALPMDLALILRRLEGNYYRGARALAHDCHLIIVNCLKFNLEDSGIARQSQRLASAL 92
            PVD      Y  ++A P+DL  I RRL   YYR   A   D  LI +NC  +N+  S I++ S+ L SA+
Sbjct:    3 PVDEETFIDYPISIANPIDLTKIQRRLRLGYYRQVEAFLSDVKLISINCETYNIPSSPISQNSRNLLSAI 72          
BLAST of jgi.p|Trimin1|132884 vs. uniprot
Match: A0A6G0XRZ7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XRZ7_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 3.860e-6
Identity = 26/55 (47.27%), Postives = 36/55 (65.45%), Query Frame = 0
Query:   32 YGATVALPMDLALILRRLEGNYYRGARALAHDCHLIIVNCLKFNLEDSGIARQSQ 86
            Y  T+A PMDL+LI RR+E  YYR   AL  D  L++ NC  +N+E S IA+ ++
Sbjct: 1445 YHITIANPMDLSLICRRVESGYYRQVDALLADVKLMVRNCETYNVESSLIAQNAR 1499          
BLAST of jgi.p|Trimin1|132884 vs. uniprot
Match: A0A6A3MDY0_9STRA (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MDY0_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 5.300e-6
Identity = 30/77 (38.96%), Postives = 41/77 (53.25%), Query Frame = 0
Query:   16 FAASFAAPVDLAAVYGYGATVALPMDLALILRRLEGNYYRGARALAHDCHLIIVNCLKFNLEDSGIARQSQRLASAL 92
            F+  F  PVD      Y  +VA P+DL  I RRL   YYR   A   D  L+ +NC  +N+  S I++ S+ L SA+
Sbjct: 1802 FSRDFMYPVDEETFMDYPYSVANPIDLTKIQRRLRLGYYRQVEAFLADVKLLRINCETYNIPSSPISQNSRNLYSAV 1878          
BLAST of jgi.p|Trimin1|132884 vs. uniprot
Match: G4YIG9_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YIG9_PHYSP)

HSP 1 Score: 52.0 bits (123), Expect = 1.350e-5
Identity = 29/77 (37.66%), Postives = 41/77 (53.25%), Query Frame = 0
Query:   16 FAASFAAPVDLAAVYGYGATVALPMDLALILRRLEGNYYRGARALAHDCHLIIVNCLKFNLEDSGIARQSQRLASAL 92
            F+  F  PVD      Y  +VA P+DL  I RRL   YYR   A   D  L+ +NC  +N+  S I++ S+ L +A+
Sbjct: 1432 FSRDFMYPVDEETFMDYPYSVANPIDLTKIQRRLRLGYYRQVEAFLADVKLLRINCETYNIPSSPISQNSRNLYAAV 1508          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|132884 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A835ZAL2_9STRA6.950e-58100.00Bromodomain-containing protein (Fragment) n=1 Tax=... [more]
A0A6H5KTA2_9PHAE1.600e-940.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LEP1_ECTSI2.170e-940.66WD-repeat protein, putative n=1 Tax=Ectocarpus sil... [more]
A0A6F9D7L9_9ASCI9.130e-837.78Bromodomain and WD repeat-containing protein 3 n=1... [more]
A0A6G0LMW6_9STRA2.820e-638.96Uncharacterized protein n=1 Tax=Phytophthora fraga... [more]
H3GMX0_PHYRM3.600e-640.00Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A6G0XRZ7_9STRA3.860e-647.27Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A6A3MDY0_9STRA5.300e-638.96Uncharacterized protein n=8 Tax=Phytophthora TaxID... [more]
G4YIG9_PHYSP1.350e-537.66Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001487BromodomainPRINTSPR00503BROMODOMAINcoord: 63..82
score: 32.5
coord: 15..28
score: 29.81
coord: 45..63
score: 29.63
coord: 29..45
score: 32.99
IPR001487BromodomainSMARTSM00297bromo_6coord: 2..95
e-value: 0.0011
score: 20.4
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 7..85
e-value: 3.6E-13
score: 49.4
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 12..82
score: 11.7812
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 1..95
e-value: 1.5E-19
score: 71.7
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 4..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_196contigContig_196:167816..168100 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|132884mRNA_16255Tribonema minus UTEX_B_3156 mRNAContig_196 167816..168100 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|132884|gw1.196.19.1 ID=Trimin1|132884|gw1.196.19.1|Name=jgi.p|Trimin1|132884|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=95bp
RRRLGAALEALSKERFAASFAAPVDLAAVYGYGATVALPMDLALILRRLE
GNYYRGARALAHDCHLIIVNCLKFNLEDSGIARQSQRLASALAEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
IPR036427Bromodomain-like_sf