Trimin1|132860|gw1.18.65.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|132860
Unique NameTrimin1|132860|gw1.18.65.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length175
Homology
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BLAST of jgi.p|Trimin1|132860 vs. uniprot
Match: A0A835ZEH2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEH2_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 1.230e-18
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 0 
Query:    1 CECGKARPSFGFEGDDRATCCALCKADNMTDIKKRRCV 38
            CECGKARPSFGFEGDDRATCCALCKADNMTDIKKRRCV
Sbjct:    1 CECGKARPSFGFEGDDRATCCALCKADNMTDIKKRRCV 38
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BLAST of jgi.p|Trimin1|132860 vs. uniprot
Match: A0A813F4K6_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813F4K6_POLGL)

HSP 1 Score: 54.3 bits (129), Expect = 5.400e-6
Identity = 22/32 (68.75%), Postives = 25/32 (78.12%), Query Frame = 0 
Query:    1 CECGKARPSFGFEGDDRATCCALCKADNMTDI 32
            C CG+ RPSFGF GD RATCC+ CKA+ M DI
Sbjct:   26 CTCGQRRPSFGFPGDARATCCSQCKAEYMVDI 57
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BLAST of jgi.p|Trimin1|132860 vs. uniprot
Match: A0A835Z0G3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0G3_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 7.040e-6
Identity = 21/29 (72.41%), Postives = 26/29 (89.66%), Query Frame = 0 
Query:    1 CECGKARPSFGFEGDDRATCCALCKADNM 29
            C CGK++PSFG E D+RATCCALCK+D+M
Sbjct:    9 CSCGKSQPSFGVEEDERATCCALCKSDDM 37
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|132860 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A835ZEH2_9STRA1.230e-18100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A813F4K6_POLGL5.400e-668.75Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A835Z0G3_9STRA7.040e-672.41Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043822EsV-1-7 cysteine-rich motifPFAMPF19114EsV_1_7_cyscoord: 108..139
e-value: 3.9E-4
score: 21.0
coord: 42..68
e-value: 20.0
score: 6.0
coord: 144..175
e-value: 0.13
score: 13.0
coord: 1..33
e-value: 0.0082
score: 16.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_18contigContig_18:1165944..1166468 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|132860mRNA_1482Tribonema minus UTEX_B_3156 mRNAContig_18 1165944..1166468 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|132860|gw1.18.65.1 ID=Trimin1|132860|gw1.18.65.1|Name=jgi.p|Trimin1|132860|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=175bp
CECGKARPSFGFEGDDRATCCALCKADNMTDIKKRRCVCGSASPCFGFEG
DDRATCCALCKNVNMIDIHNRRCNCGKARPKFGYGSDTRPTCCEICKHDN
MIILNRRCNCGKVQPSFGFVGDARATCCALCKDDKMVNIVTRRCNCGKVQ
PVFGLDGDARATCCALCKDNDMIDV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043822EsV_1_7_cys