Trimin1|131798|gw1.7.19.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|131798
Unique NameTrimin1|131798|gw1.7.19.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length157
Homology
BLAST of jgi.p|Trimin1|131798 vs. uniprot
Match: A0A835YL60_9STRA (Adenine DNA glycosylase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL60_9STRA)

HSP 1 Score: 309 bits (791), Expect = 2.240e-106
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0
Query:    1 MCQQTRVETVVGYYARWMARLPTVEALAAADEDTVNAMWAGLGYYRRARLLHSGARAVVAERAGRLPRAAAELRAIPGIGPYTAGAISSIAFAQREPVVDGNVVRVLSRLRACAASPKSNALVALCWQLARGLVPEDRPGDFNQALMELGSLVCTPR 157
            MCQQTRVETVVGYYARWMARLPTVEALAAADEDTVNAMWAGLGYYRRARLLHSGARAVVAERAGRLPRAAAELRAIPGIGPYTAGAISSIAFAQREPVVDGNVVRVLSRLRACAASPKSNALVALCWQLARGLVPEDRPGDFNQALMELGSLVCTPR
Sbjct:    1 MCQQTRVETVVGYYARWMARLPTVEALAAADEDTVNAMWAGLGYYRRARLLHSGARAVVAERAGRLPRAAAELRAIPGIGPYTAGAISSIAFAQREPVVDGNVVRVLSRLRACAASPKSNALVALCWQLARGLVPEDRPGDFNQALMELGSLVCTPR 157          
BLAST of jgi.p|Trimin1|131798 vs. uniprot
Match: A0A067BVX9_SAPPC (Adenine DNA glycosylase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BVX9_SAPPC)

HSP 1 Score: 200 bits (509), Expect = 6.980e-60
Identity = 99/155 (63.87%), Postives = 117/155 (75.48%), Query Frame = 0
Query:    1 MCQQTRVETVVGYYARWMARLPTVEALAAADEDTVNAMWAGLGYYRRARLLHSGARAVVAERAGRLPRAAAELRAIPGIGPYTAGAISSIAFAQREPVVDGNVVRVLSRLRACAASPKSNALVALCWQLARGLVPEDRPGDFNQALMELGSLVCT 155
            MCQQTRVETVV YY RWM + PTV ALAAA+ D VNA WAGLGYYRRAR+LH GA+ VV    G +P     L+AIPGIGPYTAGAI+S+AF    P+VDGNV+RV+SRLRA  A PK   L+  CW+  + L+  DRPGDFNQALMELG+ +C+
Sbjct:   67 MCQQTRVETVVDYYVRWMEKFPTVHALAAAEPDQVNAAWAGLGYYRRARMLHDGAKFVVETYNGDMPNDIERLKAIPGIGPYTAGAIASVAFNVPAPLVDGNVIRVVSRLRAIGADPKHKPLLDHCWESGQTLIDADRPGDFNQALMELGARLCS 221          
BLAST of jgi.p|Trimin1|131798 vs. uniprot
Match: A0A1V9ZA94_9STRA (Adenine DNA glycosylase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZA94_9STRA)

HSP 1 Score: 198 bits (503), Expect = 1.580e-58
Identity = 97/155 (62.58%), Postives = 115/155 (74.19%), Query Frame = 0
Query:    1 MCQQTRVETVVGYYARWMARLPTVEALAAADEDTVNAMWAGLGYYRRARLLHSGARAVVAERAGRLPRAAAELRAIPGIGPYTAGAISSIAFAQREPVVDGNVVRVLSRLRACAASPKSNALVALCWQLARGLVPEDRPGDFNQALMELGSLVCT 155
            MCQQTRVETVV YY RWM + PTV ALAAA+ + VNA WAGLGYYRRAR+LH GA+ VV    G +P     L+AIPGIGPYTAGAI+S+AF    P+VDGNV+RV+SRLRA  A PK   L+  CW+    L+   RPGDFNQALMELG+ +C+
Sbjct:   67 MCQQTRVETVVDYYVRWMEKFPTVHALAAAEPEQVNAAWAGLGYYRRARMLHDGAKYVVETYDGEMPNDIDRLKAIPGIGPYTAGAIASVAFGVPAPLVDGNVIRVVSRLRAVGADPKHKPLIDHCWESGAALIDPKRPGDFNQALMELGARLCS 221          
BLAST of jgi.p|Trimin1|131798 vs. uniprot
Match: A0A1V9ZNM1_9STRA (Adenine DNA glycosylase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZNM1_9STRA)

HSP 1 Score: 197 bits (501), Expect = 2.200e-58
Identity = 94/155 (60.65%), Postives = 120/155 (77.42%), Query Frame = 0
Query:    1 MCQQTRVETVVGYYARWMARLPTVEALAAADEDTVNAMWAGLGYYRRARLLHSGARAVVAERAGRLPRAAAELRAIPGIGPYTAGAISSIAFAQREPVVDGNVVRVLSRLRACAASPKSNALVALCWQLARGLVPEDRPGDFNQALMELGSLVCT 155
            MCQQTRVETVV YY +WM + PTVEALAAAD + VNA WAGLGYYRRAR+LH GA+ VV +  G++P+    L+ IPGIGPYTAGAI+S+AF    P+VDGNV+RV++RLRA  A PK   L+  CW+    L+ +++PGDFNQA+MELG+ +C+
Sbjct:   65 MCQQTRVETVVEYYVKWMEKFPTVEALAAADPEQVNAAWAGLGYYRRARMLHEGAKFVVEKLNGKMPQDVETLKTIPGIGPYTAGAIASVAFNVPAPLVDGNVIRVVARLRAIGADPKHKPLLDHCWESGETLIDKNQPGDFNQAIMELGATLCS 219          
BLAST of jgi.p|Trimin1|131798 vs. uniprot
Match: D7FM58_ECTSI (Adenine DNA glycosylase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM58_ECTSI)

HSP 1 Score: 197 bits (502), Expect = 1.940e-57
Identity = 97/155 (62.58%), Postives = 118/155 (76.13%), Query Frame = 0
Query:    1 MCQQTRVETVVGYYARWMARLPTVEALAAADEDTVNAMWAGLGYYRRARLLHSGARAVVAERAGRLPRAAAELRAIPGIGPYTAGAISSIAFAQREPVVDGNVVRVLSRLRACAASPKSNALVALCWQLARGLVPEDRPGDFNQALMELGSLVCT 155
            M QQTRVETV+ YY +WM   PT   LAAA  + VN  WAGLGYYRRA++LH GA+ VV++ +G LP  A EL+ +PGIGPYTAGA++SIAF + EP+VDGNV+RVL+RLRA A+ PK+  L  LCW LA  +V   RPGDFNQALMELG+ VCT
Sbjct:  186 MLQQTRVETVIDYYVKWMTLFPTPNDLAAASLEQVNKAWAGLGYYRRAKMLHEGAKKVVSDHSGCLPGTAKELKDLPGIGPYTAGAVASIAFGECEPLVDGNVIRVLARLRAIASDPKNAGLNKLCWDLAGSIVDPGRPGDFNQALMELGATVCT 340          
BLAST of jgi.p|Trimin1|131798 vs. uniprot
Match: A0A6G0X8F5_9STRA (Adenine DNA glycosylase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X8F5_9STRA)

HSP 1 Score: 195 bits (495), Expect = 2.000e-57
Identity = 93/155 (60.00%), Postives = 116/155 (74.84%), Query Frame = 0
Query:    1 MCQQTRVETVVGYYARWMARLPTVEALAAADEDTVNAMWAGLGYYRRARLLHSGARAVVAERAGRLPRAAAELRAIPGIGPYTAGAISSIAFAQREPVVDGNVVRVLSRLRACAASPKSNALVALCWQLARGLVPEDRPGDFNQALMELGSLVCT 155
            MCQQTRV+TVV Y+ +WM   PT+E LA AD D VN++WAGLGYYRRAR+LH GA+ V+ +  G +P     L++IPGIGPYTAGAI+S+AF Q EP+VDGNV+RV SRLRA    P    L+  CW   + L+ E+RPGDFNQALMELG+ VC+
Sbjct:   67 MCQQTRVDTVVQYFTKWMEVFPTIETLANADPDQVNSVWAGLGYYRRARMLHQGAKYVMEKFNGEMPSDVESLKSIPGIGPYTAGAIASVAFQQVEPLVDGNVIRVFSRLRAIGGDPNHKPLLKHCWDSGKQLIDENRPGDFNQALMELGATVCS 221          
BLAST of jgi.p|Trimin1|131798 vs. uniprot
Match: W4GCU1_9STRA (Adenine DNA glycosylase n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GCU1_9STRA)

HSP 1 Score: 194 bits (494), Expect = 3.130e-57
Identity = 94/155 (60.65%), Postives = 116/155 (74.84%), Query Frame = 0
Query:    1 MCQQTRVETVVGYYARWMARLPTVEALAAADEDTVNAMWAGLGYYRRARLLHSGARAVVAERAGRLPRAAAELRAIPGIGPYTAGAISSIAFAQREPVVDGNVVRVLSRLRACAASPKSNALVALCWQLARGLVPEDRPGDFNQALMELGSLVCT 155
            MCQQTRV+TVV YY +WM   PT+++LA AD D VNA+WAGLGYYRRAR+LH GA+ V+ +  G +PR    L+ IPGIGPYTAGAI+S+AF Q EP+VDGNV+RV+SRLRA +  P    L   CW+    L+   RPGDFNQALMELG+ VC+
Sbjct:   67 MCQQTRVDTVVTYYTKWMDTFPTIQSLANADPDQVNAVWAGLGYYRRARMLHQGAQFVMEKFNGDMPRDVDSLKTIPGIGPYTAGAIASVAFGQVEPLVDGNVIRVVSRLRAISGDPNHKPLTKHCWESGTKLIDAARPGDFNQALMELGATVCS 221          
BLAST of jgi.p|Trimin1|131798 vs. uniprot
Match: A0A6B2L4Y2_9EUKA (Adenine DNA glycosylase (Fragment) n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L4Y2_9EUKA)

HSP 1 Score: 191 bits (485), Expect = 1.100e-56
Identity = 90/157 (57.32%), Postives = 122/157 (77.71%), Query Frame = 0
Query:    1 MCQQTRVETVVGYYARWMARLPTVEALAAADEDTVNAMWAGLGYYRRARLLHSGARAVVAERAGRLPRAAAELRAIPGIGPYTAGAISSIAFAQREPVVDGNVVRVLSRLRACAASPKSNALVALCWQLARGLVPEDRPGDFNQALMELGSLVCTPR 157
            M QQT+V+TV+ Y+ +WM   P+V+ LA A E+ VN MW+GLGYYRRA+ LHS A+ V+ +  G+LP+  +EL  +PGIG YTAGA+SSIAF +  P+VDGNV+RVLSRLR   A PK++ +  L W+LA+ LVP+DRPGDFNQ+LM+LG+ +CTP+
Sbjct:   49 MLQQTQVDTVIPYFMKWMEAFPSVKDLAEASEERVNEMWSGLGYYRRAKYLHSSAKLVMEKHNGQLPQTCSELLKLPGIGQYTAGAVSSIAFGECTPLVDGNVIRVLSRLRFIRADPKASKINKLYWKLAKDLVPQDRPGDFNQSLMDLGATICTPK 205          
BLAST of jgi.p|Trimin1|131798 vs. uniprot
Match: UPI001F5E696A (LOW QUALITY PROTEIN: adenine DNA glycosylase n=1 Tax=Vigna umbellata TaxID=87088 RepID=UPI001F5E696A)

HSP 1 Score: 185 bits (469), Expect = 1.590e-56
Identity = 99/157 (63.06%), Postives = 120/157 (76.43%), Query Frame = 0
Query:    1 MCQQTRVETVVGYYARWMARLPTVEALA-AADEDTVNAMWAGLGYYRRARLLHSGARAVVAERAGRLPRAAAELRAIPGIGPYTAGAISSIAFAQREPVVDGNVVRVLSRLRACAASPKSNALVALCWQLARGLVPEDRPGDFNQALMELGSLVCTP 156
            M QQTRV+TV+ YY RWM + PT+  LA +A  + VN MWAGLGYYRRAR L  GA+ VVAE  G++P+ A+ LR IPGIG YT+GAI+SIAF +  PVVDGNVVRV++RLRA +A+PK +A V   W+LA  LV   RPGDFNQALMELG+ VCTP
Sbjct:   58 MLQQTRVQTVITYYNRWMQKWPTIYHLALSASLEEVNEMWAGLGYYRRARFLLEGAKKVVAE-GGKIPKVASMLRKIPGIGDYTSGAIASIAFKEVVPVVDGNVVRVIARLRAVSANPKDSATVKRFWKLAAQLVDPVRPGDFNQALMELGATVCTP 213          
BLAST of jgi.p|Trimin1|131798 vs. uniprot
Match: A0A0L9TFY5_PHAAN (Adenine DNA glycosylase n=7 Tax=Phaseoleae TaxID=163735 RepID=A0A0L9TFY5_PHAAN)

HSP 1 Score: 192 bits (487), Expect = 2.130e-56
Identity = 100/156 (64.10%), Postives = 120/156 (76.92%), Query Frame = 0
Query:    1 MCQQTRVETVVGYYARWMARLPTVEALAAADEDTVNAMWAGLGYYRRARLLHSGARAVVAERAGRLPRAAAELRAIPGIGPYTAGAISSIAFAQREPVVDGNVVRVLSRLRACAASPKSNALVALCWQLARGLVPEDRPGDFNQALMELGSLVCTP 156
            M QQTRV+TV+GYY RWM + PT+  LA A  + VN MWAGLGYYRRAR L  GA+ VVAE  G++P+ A+ LR IPGIG YT+GAI+SIAF +  PVVDGNVVRV++RLRA +A+PK +A V   W+LA  LV   RPGDFNQALMELG+ VCTP
Sbjct:   90 MLQQTRVQTVIGYYNRWMQKWPTIYHLAQASLEEVNEMWAGLGYYRRARFLLEGAKKVVAE-GGKIPKVASMLRKIPGIGDYTSGAIASIAFKEVVPVVDGNVVRVIARLRAVSANPKDSATVKRFWKLAAQLVDPVRPGDFNQALMELGATVCTP 244          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|131798 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YL60_9STRA2.240e-106100.00Adenine DNA glycosylase (Fragment) n=1 Tax=Tribone... [more]
A0A067BVX9_SAPPC6.980e-6063.87Adenine DNA glycosylase n=2 Tax=Saprolegnia TaxID=... [more]
A0A1V9ZA94_9STRA1.580e-5862.58Adenine DNA glycosylase n=1 Tax=Achlya hypogyna Ta... [more]
A0A1V9ZNM1_9STRA2.200e-5860.65Adenine DNA glycosylase n=1 Tax=Thraustotheca clav... [more]
D7FM58_ECTSI1.940e-5762.58Adenine DNA glycosylase n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6G0X8F5_9STRA2.000e-5760.00Adenine DNA glycosylase n=1 Tax=Aphanomyces euteic... [more]
W4GCU1_9STRA3.130e-5760.65Adenine DNA glycosylase n=2 Tax=Aphanomyces astaci... [more]
A0A6B2L4Y2_9EUKA1.100e-5657.32Adenine DNA glycosylase (Fragment) n=1 Tax=Arcella... [more]
UPI001F5E696A1.590e-5663.06LOW QUALITY PROTEIN: adenine DNA glycosylase n=1 T... [more]
A0A0L9TFY5_PHAAN2.130e-5664.10Adenine DNA glycosylase n=7 Tax=Phaseoleae TaxID=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003265HhH-GPD domainSMARTSM00478endo3endcoord: 1..152
e-value: 5.9E-42
score: 155.4
IPR003265HhH-GPD domainPFAMPF00730HhH-GPDcoord: 2..125
e-value: 6.9E-19
score: 68.5
IPR003265HhH-GPD domainCDDcd00056ENDO3ccoord: 1..150
e-value: 1.27081E-43
score: 139.684
IPR000445Helix-hairpin-helix motifPFAMPF00633HHHcoord: 66..89
e-value: 2.3E-6
score: 27.2
NoneNo IPR availableGENE3D1.10.340.30Hypothetical protein; domain 2coord: 1..88
e-value: 2.6E-34
score: 120.1
IPR023170Helix-hairpin-helix, base-excision DNA repair, C-terminalGENE3D1.10.1670.10coord: 89..157
e-value: 1.3E-12
score: 49.5
IPR044298Adenine/Thymine-DNA glycosylasePANTHERPTHR42944ADENINE DNA GLYCOSYLASEcoord: 1..156
IPR004036Endonuclease III-like, conserved site-2PROSITEPS01155ENDONUCLEASE_III_2coord: 64..91
IPR011257DNA glycosylaseSUPERFAMILY48150DNA-glycosylasecoord: 1..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_7contigContig_7:1717272..1722362 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|131798mRNA_2660Tribonema minus UTEX_B_3156 mRNAContig_7 1717272..1722362 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|131798|gw1.7.19.1 ID=Trimin1|131798|gw1.7.19.1|Name=jgi.p|Trimin1|131798|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=157bp
MCQQTRVETVVGYYARWMARLPTVEALAAADEDTVNAMWAGLGYYRRARL
LHSGARAVVAERAGRLPRAAAELRAIPGIGPYTAGAISSIAFAQREPVVD
GNVVRVLSRLRACAASPKSNALVALCWQLARGLVPEDRPGDFNQALMELG
SLVCTPR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003265HhH-GPD_domain
IPR000445HhH_motif
IPR023170HhH_base_excis_C
IPR044298MIG/MutY
IPR004036Endonuclease-III-like_CS2
IPR011257DNA_glycosylase