Trimin1|131365|gw1.212.13.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|131365
Unique NameTrimin1|131365|gw1.212.13.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length141
Homology
BLAST of jgi.p|Trimin1|131365 vs. uniprot
Match: A0A835Z3K1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3K1_9STRA)

HSP 1 Score: 133 bits (334), Expect = 2.710e-37
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0
Query:    1 MGNVDSIPVASQVKSAVQVCQGDVQGALETQDTFSKRCLVVXXXXXXXXXXXXXXXXXXXXXQEFVSPDNMRLLMSPSVDCVPVLAXXXXXXXXXXXXXXXXXXXXXRFSQTCVGVS 117
            MGNVDSIPVASQVKSAVQVCQGDVQGALETQDTFSKRCLVVXXXXXXXXXXXXXXXXXXXXXQEFVSPDNMRLLMSPSVDCVPVLAXXXXXXXXXXXXXXXXXXXXXRFSQTCVGVS
Sbjct:    1 MGNVDSIPVASQVKSAVQVCQGDVQGALETQDTFSKRCLVVXXXXXXXXXXXXXXXXXXXXXQEFVSPDNMRLLMSPSVDCVPVLAXXXXXXXXXXXXXXXXXXXXXRFSQTCVGVS 117          
BLAST of jgi.p|Trimin1|131365 vs. uniprot
Match: A0A0L0G702_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G702_9EUKA)

HSP 1 Score: 62.4 bits (150), Expect = 3.960e-9
Identity = 50/71 (70.42%), Postives = 59/71 (83.10%), Query Frame = 0
Query:    1 MGNVDSIPVASQVKSAVQVCQGDVQGALETQDTFSKRCLVVXXXXXXXXXXXXXXXXXXXXXQEFVSPDNM 71
            MGNVDS+P+ SQ KSAVQ C GD+ GA  TQ+ FSK+C++ XXXXXXXXXXXXXXXXXXXXX EF+ P N+
Sbjct:    1 MGNVDSVPIVSQAKSAVQACHGDMDGATRTQENFSKQCVIXXXXXXXXXXXXXXXXXXXXXXLEFIDPKNL 71          
BLAST of jgi.p|Trimin1|131365 vs. uniprot
Match: A0A2A2LHX8_9BILA (Uncharacterized protein n=2 Tax=Diploscapter pachys TaxID=2018661 RepID=A0A2A2LHX8_9BILA)

HSP 1 Score: 55.5 bits (132), Expect = 3.520e-6
Identity = 26/41 (63.41%), Postives = 32/41 (78.05%), Query Frame = 0
Query:    1 MGNVDSIPVASQVKSAVQVCQGDVQGALETQDTFSKRCLVV 41
            MGN DSIPV SQ KS VQV  GD +GA +TQ+ FS++CL+V
Sbjct:    1 MGNTDSIPVVSQTKSLVQVTFGDKKGARQTQENFSRQCLLV 41          
BLAST of jgi.p|Trimin1|131365 vs. uniprot
Match: A0A0L0HR71_SPIPD (Uncharacterized protein n=1 Tax=Spizellomyces punctatus (strain DAOM BR117) TaxID=645134 RepID=A0A0L0HR71_SPIPD)

HSP 1 Score: 53.5 bits (127), Expect = 1.230e-5
Identity = 23/38 (60.53%), Postives = 30/38 (78.95%), Query Frame = 0
Query:    1 MGNVDSIPVASQVKSAVQVCQGDVQGALETQDTFSKRC 38
            MG +DS+PV SQ+KSAVQ  +GD++GA  TQ+ FSK C
Sbjct:    1 MGFIDSVPVLSQIKSAVQAARGDLEGASRTQEKFSKEC 38          
BLAST of jgi.p|Trimin1|131365 vs. uniprot
Match: A0A813JHG1_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JHG1_POLGL)

HSP 1 Score: 51.2 bits (121), Expect = 9.070e-5
Identity = 23/38 (60.53%), Postives = 29/38 (76.32%), Query Frame = 0
Query:    1 MGNVDSIPVASQVKSAVQVCQGDVQGALETQDTFSKRC 38
            MGN +S+PV SQ+KSAVQ  QGD+ GA ETQ  F ++C
Sbjct:    1 MGNAESMPVVSQLKSAVQAAQGDLAGAEETQQRFIRQC 38          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|131365 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A835Z3K1_9STRA2.710e-37100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A0L0G702_9EUKA3.960e-970.42Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
A0A2A2LHX8_9BILA3.520e-663.41Uncharacterized protein n=2 Tax=Diploscapter pachy... [more]
A0A0L0HR71_SPIPD1.230e-560.53Uncharacterized protein n=1 Tax=Spizellomyces punc... [more]
A0A813JHG1_POLGL9.070e-560.53Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34494FAMILY NOT NAMEDcoord: 79..129
coord: 1..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_212contigContig_212:165530..165952 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|131365mRNA_17702Tribonema minus UTEX_B_3156 mRNAContig_212 165530..165952 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|131365|gw1.212.13.1 ID=Trimin1|131365|gw1.212.13.1|Name=jgi.p|Trimin1|131365|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=141bp
MGNVDSIPVASQVKSAVQVCQGDVQGALETQDTFSKRCLVVSQVRSAVEA
SVGNRDAALRTQQEFVSPDNMRLLMSPSVDCVPVLAQLKSAVQAANGDMG
GAAQTQRRFSQTCVGVSQLRSAVEASMGDLSAAARTQREFI
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