Trimin1|131007|gw1.18.32.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|131007
Unique Name	Trimin1\|131007\|gw1.18.32.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	159

Homology

[Close]

BLAST of jgi.p|Trimin1|131007 vs. uniprot
Match: A0A835Z740_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z740_9STRA)

HSP 1 Score: 333 bits (854), Expect = 6.420e-116
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0

Query:    1 VLCDLCTAVKQQKKDLLVLELVPPEDAAAAALNAVTPRSGRSFDRAHLLDTDGPRCNEAIDDRVTFRDAQICGQLQTDTLGAAIYTSAKVIYTLHRPLEQALNPVCRKCDTPIVTVRHYCGACSTSMSHDLCGECSCKLNGTCEVGHRTAPFETPFCLS 159
            VLCDLCTAVKQQKKDLLVLELVPPEDAAAAALNAVTPRSGRSFDRAHLLDTDGPRCNEAIDDRVTFRDAQICGQLQTDTLGAAIYTSAKVIYTLHRPLEQALNPVCRKCDTPIVTVRHYCGACSTSMSHDLCGECSCKLNGTCEVGHRTAPFETPFCLS
Sbjct:    1 VLCDLCTAVKQQKKDLLVLELVPPEDAAAAALNAVTPRSGRSFDRAHLLDTDGPRCNEAIDDRVTFRDAQICGQLQTDTLGAAIYTSAKVIYTLHRPLEQALNPVCRKCDTPIVTVRHYCGACSTSMSHDLCGECSCKLNGTCEVGHRTAPFETPFCLS 159

[Close]

BLAST of jgi.p|Trimin1|131007 vs. uniprot
Match: A0A835YIA2_9STRA (Histone acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIA2_9STRA)

HSP 1 Score: 160 bits (406), Expect = 9.650e-43
Identity = 86/163 (52.76%), Postives = 105/163 (64.42%), Query Frame = 0

Query:    1 VLCDLCTAVKQQKKDLLVLELVPPE----DAAAAALNAVTPRSGRSFDRAHLLDTDGPRCNEAIDDRVTFRDAQICGQLQTDTLGAAIYTSAKVIYTLHRPLEQALNPVCRKCDTPIVTVRHYCGACSTSMSHDLCGECSCKLNGTCEVGHRTAPFETPFCLS 159
            +L ++C  V   + DLLV +L PP     DA+ AA  A  P SGR F  + LLDTDGPR NEA+DDR  F  AQ   QLQ DTLG AI ++A++IY LH PL++ALN +CR+C +PI    HYC ACS    H LC  CS KL+G CE GHRTAP  T F L+
Sbjct:  786 MLDNMCELVHANRADLLVWQLTPPNAPLLDASWAAA-AAAPCSGRRFVPSQLLDTDGPRANEAVDDRQRFIVAQSWHQLQFDTLGGAINSTARIIYALHCPLKRALNRLCRRCKSPITKRHHYCDACSAYGCHSLCDTCSSKLDGKCEAGHRTAPLATSFRLT 947

[Close]

BLAST of jgi.p|Trimin1|131007 vs. uniprot
Match: A0A835Z6R2_9STRA (Histone acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6R2_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 1.190e-10
Identity = 39/117 (33.33%), Postives = 49/117 (41.88%), Query Frame = 0

Query:   43 FDRAHLLDTDGPRCNEAIDDRVTFRDAQICGQLQTDTLGAAIYTSAKVIYTLHRPLEQALNPVCRKCDTPIVTVRHYCGACSTSMSHDLCGECSCKLNGTCEVGHRTAPFETPFCLS 159
             D   L D D  R  E ++ R  F                A + +A ++Y  H    Q LNP+CRKCD PIV   H+C  CS       C  CS +L   C   H T P  + F LS
Sbjct:  254 MDPVRLADPDVKRSFEPLNSRKHFIAICSVNGFHFSIRAFAAHATAMLLYAQHHAERQTLNPLCRKCDKPIVGTFHHCNECSIGPPCQFCSACSQELGAMCPQKHLTVPCCSKFQLS 370

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|131007 vs. uniprot

BLAST of jgi.p|Trimin1|131007 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A835Z740_9STRA	6.420e-116	100.00	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A835YIA2_9STRA	9.650e-43	52.76	Histone acetyltransferase n=1 Tax=Tribonema minus ...	[more]
A0A835Z6R2_9STRA	1.190e-10	33.33	Histone acetyltransferase n=1 Tax=Tribonema minus ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 91..154

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_18	contig	Contig_18:165108..165935 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|131007	mRNA_1257	Tribonema minus UTEX_B_3156	mRNA	Contig_18 165108..165935 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|131007|gw1.18.32.1 ID=Trimin1|131007|gw1.18.32.1|Name=jgi.p|Trimin1|131007|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=159bp
VLCDLCTAVKQQKKDLLVLELVPPEDAAAAALNAVTPRSGRSFDRAHLLD
TDGPRCNEAIDDRVTFRDAQICGQLQTDTLGAAIYTSAKVIYTLHRPLEQ
ALNPVCRKCDTPIVTVRHYCGACSTSMSHDLCGECSCKLNGTCEVGHRTA
PFETPFCLS