Trimin1|130966|gw1.119.13.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|130966
Unique NameTrimin1|130966|gw1.119.13.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length206
Homology
BLAST of jgi.p|Trimin1|130966 vs. uniprot
Match: A0A835ZDQ5_9STRA (Vacuolar protein-like protein sorting 24 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDQ5_9STRA)

HSP 1 Score: 365 bits (937), Expect = 5.040e-127
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0
Query:    1 KKVDPQEQAKEWNRTMNREIRTIERQIKSMDNEEAKLVRDIKKLAKEGSRNERAVRVLARQMVTLRQTKTRMYEGKVQIHSVQMQLKNQLALVKVTGCLSKSTEVMQMMGKLVSIPELQATMTDLAREMERAGLTEEILGDAMEDTMGTNEDEVDQEVEKVLAEITATTMAGAEEAPVGEPQVQVAEQEQVPAEAEQEDPAELASM 206
            KKVDPQEQAKEWNRTMNREIRTIERQIKSMDNEEAKLVRDIKKLAKEGSRNERAVRVLARQMVTLRQTKTRMYEGKVQIHSVQMQLKNQLALVKVTGCLSKSTEVMQMMGKLVSIPELQATMTDLAREMERAGLTEEILGDAMEDTMGTNEDEVDQEVEKVLAEITATTMAGAEEAPVGEPQVQVAEQEQVPAEAEQEDPAELASM
Sbjct:    1 KKVDPQEQAKEWNRTMNREIRTIERQIKSMDNEEAKLVRDIKKLAKEGSRNERAVRVLARQMVTLRQTKTRMYEGKVQIHSVQMQLKNQLALVKVTGCLSKSTEVMQMMGKLVSIPELQATMTDLAREMERAGLTEEILGDAMEDTMGTNEDEVDQEVEKVLAEITATTMAGAEEAPVGEPQVQVAEQEQVPAEAEQEDPAELASM 206          
BLAST of jgi.p|Trimin1|130966 vs. uniprot
Match: D7G7G8_ECTSI (Similar to vacuolar protein sorting 24 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7G8_ECTSI)

HSP 1 Score: 183 bits (465), Expect = 4.080e-55
Identity = 101/183 (55.19%), Postives = 136/183 (74.32%), Query Frame = 0
Query:    1 KKVDPQEQAKEWNRTMNREIRTIERQIKSMDNEEAKLVRDIKKLAKEGSRNERAVRVLARQMVTLRQTKTRMYEGKVQIHSVQMQLKNQLALVKVTGCLSKSTEVMQMMGKLVSIPELQATMTDLAREMERAGLTEEILGDAMEDTMGTNED-EVDQEVEKVLAEITATTMAGAEEAPVGEPQ 182
            +KVDP+EQAKEW R++N E+R +ERQI S++  E K+ +DIK +AKEG+RNE+A+R+LA+++V  R  K RM+EGK Q+HSVQMQL+NQ+AL+KVTG + KSTE+M  +G LV IPELQ  M  LA EMERAGL EE++ D +  T     D + D EV+KV+AEIT   + GA +AP   P+
Sbjct:    7 RKVDPEEQAKEWRRSINHEVRALERQIVSLERAEKKVQKDIKTMAKEGTRNEKAIRLLAKELVMSRNAKNRMHEGKAQLHSVQMQLQNQIALIKVTGVIKKSTEIMASIGDLVKIPELQENMFQLATEMERAGLVEEVVADGLSLTDAEGLDAQADAEVDKVIAEITEGVLEGAVDAPTAVPE 189          
BLAST of jgi.p|Trimin1|130966 vs. uniprot
Match: W7TP08_9STRA (Snf7 family protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TP08_9STRA)

HSP 1 Score: 147 bits (371), Expect = 3.410e-40
Identity = 80/173 (46.24%), Postives = 123/173 (71.10%), Query Frame = 0
Query:    1 KKVDPQEQAKEWNRTMNREIRTIERQIKSMDNEEAKLVRDIKKLAKEGSRNERAVRVLARQMVTLRQTKTRMYEGKVQIHSVQMQLKNQLALVKVTGCLSKSTEVMQMMGKLVSIPELQATMTDLAREMERAGLTEEILGDAMEDTMGTNEDEVDQEVEKVLAEITATTMAGA 173
            KKV+P E+AK+  R++ REIR+++R +  ++ EE K+V++I+KLAK+G     A+ +LA+ +V  R+T+ +M  GK  + SVQMQ++ Q++ +KV GC+ KS +V++ +  LV IPEL     ++AREMERAGL EE++GDAM+    T+EDEVD EV+KVL E+    M+ A
Sbjct:   67 KKVEPMEEAKKLKRSIGREIRSVDRTLIHIEREERKIVKEIQKLAKQGETRRGALTILAKDLVRSRKTREKMVGGKAMLASVQMQIQMQMSTIKVAGCMQKSADVLKTLNALVKIPELSKVCQEMAREMERAGLVEEMVGDAMDSVDVTDEDEVDMEVQKVLEELAFNMMSDA 239          
BLAST of jgi.p|Trimin1|130966 vs. uniprot
Match: UPI00145575B8 (charged multivesicular body protein 3-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI00145575B8)

HSP 1 Score: 135 bits (341), Expect = 2.110e-36
Identity = 77/174 (44.25%), Postives = 125/174 (71.84%), Query Frame = 0
Query:    4 DPQEQAKEWNRTMNREIRTIERQIKSMDNEEAKLVRDIKKLAKEGSRNERAVRVLARQMVTLRQTKTRMYEGKVQIHSVQMQLKNQLALVKVTGCLSKSTEVMQMMGKLVSIPELQATMTDLAREMERAGLTEEILGDAMEDTMGTNEDEVD-QEVEKVLAEITATTMAGAEEA 176
            DP+EQ +EW R + +E R ++RQI+S++ EE K+ R IK+ AK+G ++    ++LA+++V  R+ KTR++  K Q++SV MQ+KNQLA+++++G LSKSTEVM+ M +L  + E+QATM ++++EM +AG+ EE+L D  E     + +E   +EVEK+L EITA  ++ A +A
Sbjct:   11 DPKEQVQEWTRNLTKESRKLDRQIRSIEREELKVKRSIKEAAKKGQKD--VCKILAKEIVNSRKAKTRIHTSKAQLNSVSMQMKNQLAVIRMSGALSKSTEVMKYMQQLCKVSEVQATMMEMSKEMMKAGIIEEMLEDTFESMEDDDLEEASSEEVEKILFEITANHLSDAPKA 182          
BLAST of jgi.p|Trimin1|130966 vs. uniprot
Match: UPI000A2A920C (charged multivesicular body protein 3 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A920C)

HSP 1 Score: 135 bits (339), Expect = 3.780e-36
Identity = 75/173 (43.35%), Postives = 120/173 (69.36%), Query Frame = 0
Query:    5 PQEQAKEWNRTMNREIRTIERQIKSMDNEEAKLVRDIKKLAKEGSRNERAVRVLARQMVTLRQTKTRMYEGKVQIHSVQMQLKNQLALVKVTGCLSKSTEVMQMMGKLVSIPELQATMTDLAREMERAGLTEEILGDAMEDTMGTN-EDEVDQEVEKVLAEITATTMAGAEEA 176
            P+EQ +EW+ ++ +E R ++RQI+++ NEE K+ R IK  AK+G ++    R+LA++++  R+  ++MY  K Q++SV+M +K QLA +++ G + KS EVM  M KLV +PE+QATMT+L++EM +AG+ EE+L D  E     + E+  D+EVEK+L E+TA  +  AE A
Sbjct:   12 PKEQVREWSASLRKEGRVLDRQIRAIKNEEMKVQRSIKDAAKKGDKD--VCRILAKELINSRKAVSKMYASKAQLNSVEMSMKTQLATIRMAGAMEKSAEVMAYMQKLVKVPEIQATMTELSKEMMKAGIIEEMLEDTFEGLEDDDLEEAADEEVEKILFEVTAGVLGNAEHA 182          
BLAST of jgi.p|Trimin1|130966 vs. uniprot
Match: A0A8J2S9J1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S9J1_9STRA)

HSP 1 Score: 134 bits (336), Expect = 1.060e-35
Identity = 83/197 (42.13%), Postives = 126/197 (63.96%), Query Frame = 0
Query:    1 KKVDPQEQAKEWNRTMNREIRTIERQIKSMDNEEAKLVRDIKKLAKEGSRNERAVRVLARQMVTLRQTKTRMYEGKVQIHSVQMQLKNQLALVKVTGCLSKSTEVMQMMGKLVSIPELQATMTDLAREMERAGLTEEILGDAMEDTMGTN-EDEVDQEVEKVLAEITATTMAGAEEAPVGEPQVQVAEQEQVPAEAE 196
            K  DPQE+ K+W R + +E R ++R+I  ++  E K   + +K  KEG ++  A +++AR++V  R  + RM   K QI+SV MQL+ Q A+V+  GC+ KSTEVM+ M KLV +PELQ TM ++ REMER+GL EE++GDA+++  G + E+E + +V KV+ E+      G  +AP   P+ Q  E    PAEA+
Sbjct:   11 KAKDPQEEMKKWRRELRKEQRAMDREISKLEQMERKSRDECRKYGKEGRQD--ACKIVAREIVRTRAARNRMLMAKAQINSVNMQLQTQAAMVRAAGCMKKSTEVMRCMNKLVKLPELQKTMMEMQREMERSGLIEEVVGDALDELDGDDVEEETELQVNKVVEELAGDLFKGQTDAPETLPEQQAVE----PAEAD 201          
BLAST of jgi.p|Trimin1|130966 vs. uniprot
Match: C3YIV6_BRAFL (Uncharacterized protein n=3 Tax=Branchiostoma TaxID=7737 RepID=C3YIV6_BRAFL)

HSP 1 Score: 131 bits (329), Expect = 1.480e-34
Identity = 75/172 (43.60%), Postives = 116/172 (67.44%), Query Frame = 0
Query:    4 DPQEQAKEWNRTMNREIRTIERQIKSMDNEEAKLVRDIKKLAKEGSRNERAVRVLARQMVTLRQTKTRMYEGKVQIHSVQMQLKNQLALVKVTGCLSKSTEVMQMMGKLVSIPELQATMTDLAREMERAGLTEEILGDAMEDTMGTN--EDEVDQEVEKVLAEITATTMAGA 173
            DP+EQ +EW   + ++ R ++RQI+ +  EE K+ R +K+ AK+G ++    R+LA++MV  R+  +++Y  K QI+SV M +KNQL ++KV+G + KSTEVM+ M  LV +PE+QATM DL++EM +AG+ EE+L D  E        E+E + EVEK+L E+TA  +  A
Sbjct:   11 DPKEQVREWTSQLRKQDRLLDRQIRGIQREEEKVKRSLKEAAKKGDKD--TCRILAKEMVRSRKAVSKIYTSKAQINSVSMGMKNQLGVLKVSGAMEKSTEVMKYMQNLVKVPEIQATMRDLSKEMMKAGIIEEMLDDTFESLEDDEDLEEETEAEVEKILFELTAGALGQA 180          
BLAST of jgi.p|Trimin1|130966 vs. uniprot
Match: A0A210Q9E1_MIZYE (Charged multivesicular body protein 3 n=2 Tax=Pectinidae TaxID=6566 RepID=A0A210Q9E1_MIZYE)

HSP 1 Score: 130 bits (328), Expect = 1.980e-34
Identity = 78/174 (44.83%), Postives = 118/174 (67.82%), Query Frame = 0
Query:    5 PQEQAKEWNRTMNREIRTIERQIKSMDNEEAKLVRDIKKLAKEGSRNERAVRVLARQMVTLRQTKTRMYEGKVQIHSVQMQLKNQLALVKVTGCLSKSTEVMQMMGKLVSIPELQATMTDLAREMERAGLTEEILGDAME--DTMGTNEDEVDQEVEKVLAEITATTMAGAEEA 176
            P+E  +EWN  + +E   I+R IKS+  EEAK+ R+IK LAK+G ++  A+++LA+++V  R+   R+Y  K Q++SV MQLKNQ A+V++TG L KS EV++ M +LV + ++  TM ++++EM +AG+ E  + DA E  D     E+E D EVEKVL E+TA T+  A EA
Sbjct:   12 PKELVQEWNSKLRKEGHNIDRSIKSIQREEAKVTREIKALAKKGDKD--AIKILAKEVVRSRKAVNRLYSSKAQLNSVSMQLKNQAAMVRMTGALQKSGEVLKSMQELVKVSDISNTMREMSKEMMKAGIMEXXMEDAFESMDDQDELEEEADTEVEKVLFELTAGTLGKAPEA 183          
BLAST of jgi.p|Trimin1|130966 vs. uniprot
Match: UPI001BB206FD (charged multivesicular body protein 3-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB206FD)

HSP 1 Score: 130 bits (327), Expect = 2.570e-34
Identity = 74/175 (42.29%), Postives = 120/175 (68.57%), Query Frame = 0
Query:    2 KVDPQEQAKEWNRTMNREIRTIERQIKSMDNEEAKLVRDIKKLAKEGSRNERAVRVLARQMVTLRQTKTRMYEGKVQIHSVQMQLKNQLALVKVTGCLSKSTEVMQMMGKLVSIPELQATMTDLAREMERAGLTEEILGDAMEDTMGTNEDEVDQ-EVEKVLAEITATTMAGAEE 175
            K DP+EQ +EW+  + +E R ++RQI+++   EAK+ R IK+ AK+   +    ++LA++++  R+ K R+Y  K  ++SV MQ+KNQLA ++++G + KSTEVM++M  LV +PE+QATM DL++EM +AG+ EE++ D  E      E+E  Q E+EKVL E+T+  ++ A E
Sbjct:    9 KKDPKEQVREWSAALRKEGRLLDRQIRTISTAEAKVQRSIKEAAKKNQLD--VCKILAKELIQSRKAKNRIYTSKAHLNSVDMQMKNQLATLRISGAMQKSTEVMKVMQSLVKVPEIQATMMDLSKEMMKAGIIEEMMEDTFESLDDDIEEEATQAEIEKVLFELTSGALSTAPE 181          
BLAST of jgi.p|Trimin1|130966 vs. uniprot
Match: T2M383_HYDVU (Charged multivesicular body protein 3 n=4 Tax=Hydra vulgaris TaxID=6087 RepID=T2M383_HYDVU)

HSP 1 Score: 130 bits (326), Expect = 3.440e-34
Identity = 77/166 (46.39%), Postives = 117/166 (70.48%), Query Frame = 0
Query:    4 DPQEQAKEWNRTMNREIRTIERQIKSMDNEEAKLVRDIKKLAKEGSRNERAVRVLARQMVTLRQTKTRMYEGKVQIHSVQMQLKNQLALVKVTGCLSKSTEVMQMMGKLVSIPELQATMTDLAREMERAGLTEEILGDA---MEDTMGTNEDEVDQEVEKVLAEIT 166
            DP+EQ +EW+  M +E R+++R I+++  EEAK+ R IK  AK+G ++     +LA++++  R+   ++Y  K Q++S++MQ+ NQLA+++V+G LSKSTEVMQ M  L+ IPELQATM + ++EM +AGL EE+L D    MED     EDE  +EVEK+L E+T
Sbjct:   11 DPKEQVREWSAGMRKEGRSLDRTIRTIKLEEAKVQRSIKDAAKKGQKD--VCYILAKEIINSRKAVNKLYSAKAQLNSIEMQMNNQLAMLRVSGSLSKSTEVMQSMQALMKIPELQATMMEFSKEMTKAGLIEEMLEDTFSGMED-QDELEDEAQEEVEKILFEVT 173          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|130966 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZDQ5_9STRA5.040e-127100.00Vacuolar protein-like protein sorting 24 (Fragment... [more]
D7G7G8_ECTSI4.080e-5555.19Similar to vacuolar protein sorting 24 homolog n=2... [more]
W7TP08_9STRA3.410e-4046.24Snf7 family protein n=1 Tax=Nannochloropsis gadita... [more]
UPI00145575B82.110e-3644.25charged multivesicular body protein 3-like n=1 Tax... [more]
UPI000A2A920C3.780e-3643.35charged multivesicular body protein 3 n=1 Tax=Exai... [more]
A0A8J2S9J1_9STRA1.060e-3542.13Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
C3YIV6_BRAFL1.480e-3443.60Uncharacterized protein n=3 Tax=Branchiostoma TaxI... [more]
A0A210Q9E1_MIZYE1.980e-3444.83Charged multivesicular body protein 3 n=2 Tax=Pect... [more]
UPI001BB206FD2.570e-3442.29charged multivesicular body protein 3-like n=1 Tax... [more]
T2M383_HYDVU3.440e-3446.39Charged multivesicular body protein 3 n=4 Tax=Hydr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 13..47
NoneNo IPR availableGENE3D6.10.140.1230coord: 1..175
e-value: 3.4E-49
score: 169.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 168..206
NoneNo IPR availablePANTHERPTHR10476:SF1CHARGED MULTIVESICULAR BODY PROTEIN 3coord: 2..202
IPR005024Snf7 familyPFAMPF03357Snf7coord: 11..182
e-value: 3.8E-32
score: 111.3
IPR005024Snf7 familyPANTHERPTHR10476CHARGED MULTIVESICULAR BODY PROTEINcoord: 2..202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_119contigContig_119:450570..452153 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|130966mRNA_10673Tribonema minus UTEX_B_3156 mRNAContig_119 450570..452153 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|130966|gw1.119.13.1 ID=Trimin1|130966|gw1.119.13.1|Name=jgi.p|Trimin1|130966|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=206bp
KKVDPQEQAKEWNRTMNREIRTIERQIKSMDNEEAKLVRDIKKLAKEGSR
NERAVRVLARQMVTLRQTKTRMYEGKVQIHSVQMQLKNQLALVKVTGCLS
KSTEVMQMMGKLVSIPELQATMTDLAREMERAGLTEEILGDAMEDTMGTN
EDEVDQEVEKVLAEITATTMAGAEEAPVGEPQVQVAEQEQVPAEAEQEDP
AELASM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005024Snf7_fam