Trimin1|130251|gw1.8.18.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|130251
Unique NameTrimin1|130251|gw1.8.18.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length75
Homology
BLAST of jgi.p|Trimin1|130251 vs. uniprot
Match: A0A835YME7_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YME7_9STRA)

HSP 1 Score: 160 bits (405), Expect = 4.080e-50
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0
Query:    1 LPVYWDSSIFLVVDEGKSNLMRAVITGPKDTPYQDGLFEFDIFLPAQYPNVPPQVQLITTGHGKVRYNPNLYACG 75
            LPVYWDSSIFLVVDEGKSNLMRAVITGPKDTPYQDGLFEFDIFLPAQYPNVPPQVQLITTGHGKVRYNPNLYACG
Sbjct:    1 LPVYWDSSIFLVVDEGKSNLMRAVITGPKDTPYQDGLFEFDIFLPAQYPNVPPQVQLITTGHGKVRYNPNLYACG 75          
BLAST of jgi.p|Trimin1|130251 vs. uniprot
Match: A0A6G0UKE8_9BILA (UBC core domain-containing protein n=1 Tax=Halicephalobus sp. NKZ332 TaxID=2598192 RepID=A0A6G0UKE8_9BILA)

HSP 1 Score: 105 bits (262), Expect = 9.190e-25
Identity = 45/75 (60.00%), Postives = 62/75 (82.67%), Query Frame = 0
Query:    1 LPVYWDSSIFLVVDEGKSNLMRAVITGPKDTPYQDGLFEFDIFLPAQYPNVPPQVQLITTGHGKVRYNPNLYACG 75
            LP+ + SSIF+ +DE + +LM+ +ITGP+DTPY +G+FEFD+F P+ YPNVPP+ Q +TTG+G VR+NPNLYA G
Sbjct:  384 LPLTYGSSIFVCMDESRVDLMKVLITGPEDTPYANGIFEFDVFFPSNYPNVPPKCQFLTTGNGTVRFNPNLYADG 458          
BLAST of jgi.p|Trimin1|130251 vs. uniprot
Match: A0A5J4YG42_9CHLO (UBC core domain-containing protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YG42_9CHLO)

HSP 1 Score: 104 bits (259), Expect = 2.030e-24
Identity = 45/75 (60.00%), Postives = 56/75 (74.67%), Query Frame = 0
Query:    1 LPVYWDSSIFLVVDEGKSNLMRAVITGPKDTPYQDGLFEFDIFLPAQYPNVPPQVQLITTGHGKVRYNPNLYACG 75
            LP+ W SSIFL  D  + +L+RA+I GP D+PY +G F FDIFLPA YPN PP V  +TTG G++R+NPNLY CG
Sbjct:  355 LPLAWTSSIFLAADSSRLDLLRALIIGPADSPYANGCFLFDIFLPANYPNAPPSVHFLTTGGGRIRFNPNLYECG 429          
BLAST of jgi.p|Trimin1|130251 vs. uniprot
Match: A0A7S1ZIC0_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZIC0_TRICV)

HSP 1 Score: 103 bits (257), Expect = 2.840e-24
Identity = 46/75 (61.33%), Postives = 59/75 (78.67%), Query Frame = 0
Query:    1 LPVYWDSSIFLVVDEGKSNLMRAVITGPKDTPYQDGLFEFDIFLPAQYPNVPPQVQLITTGHGKVRYNPNLYACG 75
            LPV+W SSIF+ +DE + ++M+A I  P+DTPY++G+FEFDIFLP  YPN PP+V LITTG   VR+NPNLY  G
Sbjct:  243 LPVHWASSIFVCIDEDRPDIMKACIMAPEDTPYENGVFEFDIFLPESYPNDPPKVHLITTGKNTVRFNPNLYQEG 317          
BLAST of jgi.p|Trimin1|130251 vs. uniprot
Match: A0A2R6WNY5_MARPO (Uncharacterized protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WNY5_MARPO)

HSP 1 Score: 103 bits (258), Expect = 3.170e-24
Identity = 47/75 (62.67%), Postives = 58/75 (77.33%), Query Frame = 0
Query:    1 LPVYWDSSIFLVVDEGKSNLMRAVITGPKDTPYQDGLFEFDIFLPAQYPNVPPQVQLITTGHGKVRYNPNLYACG 75
            LP+ W+SSI L VDE + +++RA+I GP+ TPYQ+GLF FDIFLP  YP VPP V  +TTG GKVR+NPNLY  G
Sbjct:  665 LPLEWESSIHLCVDESRVDVLRAMIVGPQGTPYQNGLFMFDIFLPPDYPQVPPHVHFLTTGGGKVRFNPNLYDSG 739          
BLAST of jgi.p|Trimin1|130251 vs. uniprot
Match: D7G0A1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0A1_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 5.920e-24
Identity = 49/75 (65.33%), Postives = 58/75 (77.33%), Query Frame = 0
Query:    1 LPVYWDSSIFLVVDEGKSNLMRAVITGPKDTPYQDGLFEFDIFLPAQYPNVPPQVQLITTGHGKVRYNPNLYACG 75
            LPV  DSSIFL VDE + ++MRA+ITGPK TPY+ G FEFDI LP  YPN PP+V  +TTG G+VR+NPNLY  G
Sbjct:  726 LPVQPDSSIFLRVDEDRFDVMRAMITGPKGTPYECGCFEFDILLPPDYPNSPPKVHFLTTGSGRVRFNPNLYQTG 800          
BLAST of jgi.p|Trimin1|130251 vs. uniprot
Match: D8LTA3_ECTSI (UBC core domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTA3_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 5.960e-24
Identity = 44/75 (58.67%), Postives = 60/75 (80.00%), Query Frame = 0
Query:    1 LPVYWDSSIFLVVDEGKSNLMRAVITGPKDTPYQDGLFEFDIFLPAQYPNVPPQVQLITTGHGKVRYNPNLYACG 75
            LP+YW S+I + +DE + +L++A+I  P  TPY  GLFEFDI+ P QYP+VPP+V L+TTG G+VR++PNLYACG
Sbjct: 1071 LPLYWGSTIAVRMDEERPHLLKAMIAAPTGTPYDSGLFEFDIYCPPQYPSVPPKVNLMTTGRGRVRFSPNLYACG 1145          
BLAST of jgi.p|Trimin1|130251 vs. uniprot
Match: A0A6H5JLB4_9PHAE (UBC core domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLB4_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 6.000e-24
Identity = 44/75 (58.67%), Postives = 59/75 (78.67%), Query Frame = 0
Query:    1 LPVYWDSSIFLVVDEGKSNLMRAVITGPKDTPYQDGLFEFDIFLPAQYPNVPPQVQLITTGHGKVRYNPNLYACG 75
            LP+YW+S I +  DE + +L++A+I  P  TPY  GLFEFDI+ P QYP+VPP+V L+TTG G+VR++PNLYACG
Sbjct: 1362 LPLYWESMIAVRTDEERPHLLKAMIAAPTGTPYDSGLFEFDIYCPPQYPSVPPKVNLMTTGRGRVRFSPNLYACG 1436          
BLAST of jgi.p|Trimin1|130251 vs. uniprot
Match: A0A2K1JHY5_PHYPA (Uncharacterized protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JHY5_PHYPA)

HSP 1 Score: 102 bits (255), Expect = 8.060e-24
Identity = 46/75 (61.33%), Postives = 57/75 (76.00%), Query Frame = 0
Query:    1 LPVYWDSSIFLVVDEGKSNLMRAVITGPKDTPYQDGLFEFDIFLPAQYPNVPPQVQLITTGHGKVRYNPNLYACG 75
            LP+ W+S I L VDE + +++RA+I GP  TPYQ+G+F FDIFLPA YP VPP V  +TTG GKVR+NPNLY  G
Sbjct:  668 LPLEWESGIHLCVDENRMDVLRALIIGPNGTPYQNGIFLFDIFLPADYPQVPPSVHFLTTGGGKVRFNPNLYDTG 742          
BLAST of jgi.p|Trimin1|130251 vs. uniprot
Match: A0A5J4TA58_9EUKA (Putative Ubiquitin-conjugating BIR-domain enzyme (Fragment) n=1 Tax=Streblomastix strix TaxID=222440 RepID=A0A5J4TA58_9EUKA)

HSP 1 Score: 95.9 bits (237), Expect = 8.330e-24
Identity = 42/75 (56.00%), Postives = 57/75 (76.00%), Query Frame = 0
Query:    1 LPVYWDSSIFLVVDEGKSNLMRAVITGPKDTPYQDGLFEFDIFLPAQYPNVPPQVQLITTGHGKVRYNPNLYACG 75
            LP+   +SIF+ VDE  + L++A+I GP +TPY+ GLFEFDI +P QYP  PP+V+++TTG G VR+NPNLY  G
Sbjct:    8 LPLTKGASIFIAVDENSTQLIKALIVGPMNTPYEQGLFEFDILIPQQYPQAPPKVEIVTTGGGTVRFNPNLYDNG 82          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|130251 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YME7_9STRA4.080e-50100.00Ubiquitin-conjugating enzyme/RWD-like protein (Fra... [more]
A0A6G0UKE8_9BILA9.190e-2560.00UBC core domain-containing protein n=1 Tax=Halicep... [more]
A0A5J4YG42_9CHLO2.030e-2460.00UBC core domain-containing protein n=1 Tax=Treboux... [more]
A0A7S1ZIC0_TRICV2.840e-2461.33Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A2R6WNY5_MARPO3.170e-2462.67Uncharacterized protein n=1 Tax=Marchantia polymor... [more]
D7G0A1_ECTSI5.920e-2465.33Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LTA3_ECTSI5.960e-2458.67UBC core domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JLB4_9PHAE6.000e-2458.67UBC core domain-containing protein n=1 Tax=Ectocar... [more]
A0A2K1JHY5_PHYPA8.060e-2461.33Uncharacterized protein n=3 Tax=Physcomitrium pate... [more]
A0A5J4TA58_9EUKA8.330e-2456.00Putative Ubiquitin-conjugating BIR-domain enzyme (... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 14..75
e-value: 1.4E-14
score: 53.9
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 1..75
score: 20.481335
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 1..75
e-value: 8.1E-29
score: 102.7
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 7..75
NoneNo IPR availablePANTHERPTHR46116:SF31BACULOVIRAL IAP REPEAT-CONTAINING PROTEIN 6coord: 1..75
NoneNo IPR availablePANTHERPTHR46116(E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYMEcoord: 1..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_8contigContig_8:530315..532116 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|130251mRNA_2775Tribonema minus UTEX_B_3156 mRNAContig_8 530315..532116 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|130251|gw1.8.18.1 ID=Trimin1|130251|gw1.8.18.1|Name=jgi.p|Trimin1|130251|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=75bp
LPVYWDSSIFLVVDEGKSNLMRAVITGPKDTPYQDGLFEFDIFLPAQYPN
VPPQVQLITTGHGKVRYNPNLYACG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD